Basic Information

Gene Symbol
Bgb
Assembly
GCA_963978815.1
Location
OZ022219.1:8305987-8308237[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-66 3.9e-62 208.6 0.0 2 140 35 169 34 170 0.96

Sequence Information

Coding Sequence
ATGCACTCAATGAATCATTCTGCTTCAGCGCTCGCTGGCATGATCCCCTTAGACACATACGGCTTATACGAGCAGCCAAAGCCGAgatttttctttaaaatacCGCGCGTCGTGCCCAATCAGAAAGCCAAGTTTGAAAGTGATGATTTGTTTAAGAAACTTGCGCGTGAATGCGAGGTGCGCTACACGAGTCATCGCGATAGACCGATGGAACAGCGACAAATACATTTTCAGAACGCCTGTCGCGAGGGTTTTGTGGAAATTGCGTTTCCCAGCACGGGTACCAATCTTCAGCTAGTGTTCACGCCGCCGGGCAATGACTATGGATCGGAAAAGCAATGCGACTTTGAGAAGGAACTCGGAAAGGTTCATATAAAATCCTCGTTCATCATGAACGGCGTTTGTGTGAGATGGCGCGGCTGGATCGATCTGGAGCGCTTGGACGGCATTGGATGCCTAGAATACGCCGAggagcgcgccgccgccgaggaTGCGCGCCTGCGGGATCGATAG
Protein Sequence
MHSMNHSASALAGMIPLDTYGLYEQPKPRFFFKIPRVVPNQKAKFESDDLFKKLARECEVRYTSHRDRPMEQRQIHFQNACREGFVEIAFPSTGTNLQLVFTPPGNDYGSEKQCDFEKELGKVHIKSSFIMNGVCVRWRGWIDLERLDGIGCLEYAEERAAAEDARLRDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00048427; iTF_00083667;
80% Identity
iTF_00083667;