Basic Information

Insect: Aleochara bilineata
Gene Symbol: Hr39_2
Assembly: GCA_003054995.1
Location: NBZA01000183.1:67789-70270[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2 1.7e+04 -8.5 13.2 48 163 114 229 102 259 0.36

2 5 0.22 1.9e+03 -2.1 4.4 46 114 202 274 185 301 0.58

3 5 6.5e-09 5.6e-05 22.7 0.1 1 45 393 439 393 462 0.70

4 5 0.0097 83 2.3 0.0 76 114 436 480 414 495 0.63

5 5 2.1e-72 1.8e-68 231.8 0.3 211 408 529 721 503 721 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2	1.7e+04	-8.5	13.2	48	163	114	229	102	259	0.36
2	5	0.22	1.9e+03	-2.1	4.4	46	114	202	274	185	301	0.58
3	5	6.5e-09	5.6e-05	22.7	0.1	1	45	393	439	393	462	0.70
4	5	0.0097	83	2.3	0.0	76	114	436	480	414	495	0.63
5	5	2.1e-72	1.8e-68	231.8	0.3	211	408	529	721	503	721	0.95

Sequence Information

Coding Sequence: ATGGCGGCGGACATGCGATCGCCGAACGTGTCCGTGACGCCGATCAACATCGAGCCGCCATaccctccgccgccgccgacgtccATGAGCAGTGATGCGTCGGCGAACCACCAGAACCATCACAATGGCGACCCGCCGTTTGACAGCTCGGACGCCGAGGTGGCGCAGATTGATTTCCAATCGAGTGTCAACTTGCGAGATAAGGTCAAGCGGGATCCCGAGGGAAGTGATATGGTTGTGCCGAGACCCATGTCCTGGGAGGGCGAGCTCTCCGATGGCGAGCGCGACATGTGCGTCGACGAAGAAAATGGccatGTACCTGAAAACTTATCAATGCAACAGAATCAAGCAGCTTCCGAGCGAGAGCGCCAAACTACAATCAACACAAATAACAACTCGAAGGAGAGTCCGCTGATGCGACTGAAACAAGCGCATACGAATTACTCGCTGCATTCAACCCCTAGCAACTCTCCATTGCTCTCGCAGCGCCATCCTATGCCGCCGATGATGGTCCCCAAGGACTTGGTGCATAAAGCGCTTAATATCCCACCAACGCCGAGTCCTGACTCGGCGGTTCATTCCGCCTATAGTGTCTTCTCATCGCCTACGCAGAGTCCCCTAACGCAGCGCCATGTCACACTCACCCCCAACCTCAGTCGGAATAACAGCGACGCATCACATTCCAGTTGCTGCTCGTATTCCAGCGTTTCCGTATCAGTATCACCCACACAGCAGTTTTCTCCGACTCATAGCCCAATACAGGGAAGACATATGCCCAATATTCATGGTAGTCCACTGCATCACAATGTACTTTACCGGAACCTGCAGGAAGACTCAAGCACGCAATTCACTACCGCGTCTGAAAATGATAACTTGGAGGACTCGCCCGGCGATGACAAAACAGGATTGATACAAACTTTCTTACCAGCGCAACCTGGCATCTCACGTCAGCAATTGATAAATAGTCCGTGTCCCATCTGCGGGGATAAAATCTCCGGCTTCCACTACGGCATCTTCAGCTGCGAGTCTTGCAAGGGTTTCTTCAAGCGCACGGTGCAGAACCGGAAGAACTACGTGTGTCTGCGTGGAGCTGTCTGTCCGGTGACGGTGGCGACGAGGAAGAAATGCCCTGCTTGTCGCTTTGAGAAGTGTCTGCAGTGCGGGATGAAATTGGAAGCCATCCGCGAGGACAGAACGCGCGGCGGGCGATCCACGTATCAGTGTTCGTACTCACTACCGCCGTCGCTGGCGAATAATTCCGAGCTGCGAGCGAGTTCGAGTGATTTACGCCATTCCAGTCTTGAGGCTCAGAATATGGGAGGTTTCAGTGTGAAAGTGGAGCCTTCCGAGATGCAACTCCACTGGAAGAAAATGAGCTCGCGCCATGCAGTCCCACCGTTATTGCAGGAAATAATGGATGTGGAGCACCTATGGCACTACAGTGAACTGGAGCTTAATAAACTCAACACCGAGGGTAGTTTGGGCAGAGAGGGAAGCAGCGGTGCCATGCATAACCTCTCCATACACCCGCTACTTGCAGGCACAGCCTTGGCCGGCTCAACCGACACGAATCAAGACTTCGTGGTGAATTTGTGCAATATCGCTGACCATCGCTTGTATAAGATTGTGAAATGGTGCAAGAGCTTGCCATTGTTTAAGAATATTTCCATTGATGATCAAATTTGTCTGCTAATCAACTCATGGTGTGAGCTACTGTTGTTTTCCTGTTGTTTTCGATCAATGTCGACCCCAGGGGAAATTCGCGTTTCCCTCGGGAAAAGTATCACGCTTTCGCAGGCAAGGGATCTGGGCATGCAGGCGTGCATCGAGCGTATGTTGAATTTCACGGAGCAGTTACGACGGTTGCGCGTTGATCGCTATGAATACGTTGCCATGAAAGTGATAGTTTTACTAACTTCAGatacGTCTGAGTTGCGAGAGGCTGATAAGGTGCGTGCGTCTCAAGAGAAGGCACTGAAAGCGCTACAAGATTACACATTAACGCATTATCCTGATAGTCCTGCAAAGTTTGGCGAATTACTCCTACGAATACCTGAATTGCAACGAACTTGTCAGGTGGGCAAAGAAATGTTAACAATAAAATCCAGAGACGATGAGGGACCAAGCTTTAATCTACTTATGGAGCTTCTACGTGGTGATCATTGA
Protein Sequence: MAADMRSPNVSVTPINIEPPYPPPPPTSMSSDASANHQNHHNGDPPFDSSDAEVAQIDFQSSVNLRDKVKRDPEGSDMVVPRPMSWEGELSDGERDMCVDEENGHVPENLSMQQNQAASERERQTTINTNNNSKESPLMRLKQAHTNYSLHSTPSNSPLLSQRHPMPPMMVPKDLVHKALNIPPTPSPDSAVHSAYSVFSSPTQSPLTQRHVTLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMPNIHGSPLHHNVLYRNLQEDSSTQFTTASENDNLEDSPGDDKTGLIQTFLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAVCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLANNSELRASSSDLRHSSLEAQNMGGFSVKVEPSEMQLHWKKMSSRHAVPPLLQEIMDVEHLWHYSELELNKLNTEGSLGREGSSGAMHNLSIHPLLAGTALAGSTDTNQDFVVNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLSQARDLGMQACIERMLNFTEQLRRLRVDRYEYVAMKVIVLLTSDTSELREADKVRASQEKALKALQDYTLTHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSRDDEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00629851;
90% Identity: iTF_00048688;
80% Identity: iTF_00048688;