Basic Information

Insect: Aleochara bilineata
Gene Symbol: bab1
Assembly: GCA_003054995.1
Location: NBZA01025960.1:28966-35159[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.3e-13 5e-10 38.9 0.0 1 39 373 412 373 416 0.90

2 4 6.8e-13 1.5e-09 37.4 0.1 1 39 427 465 427 468 0.95

3 4 1.5e-19 3.3e-16 58.7 0.0 1 45 482 527 482 527 0.98

4 4 7.4e-17 1.6e-13 50.1 0.1 1 39 534 573 534 576 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.3e-13	5e-10	38.9	0.0	1	39	373	412	373	416	0.90
2	4	6.8e-13	1.5e-09	37.4	0.1	1	39	427	465	427	468	0.95
3	4	1.5e-19	3.3e-16	58.7	0.0	1	45	482	527	482	527	0.98
4	4	7.4e-17	1.6e-13	50.1	0.1	1	39	534	573	534	576	0.95

Sequence Information

Coding Sequence: ATGTCTGGGCAACACTACGTCCTGCGATGGAACAACTACCAGACGAACATGACGTCGGTGTTCCATCAGCTGCTCCAGAACGAGGCGTTCGTCGACGTGACGCTCGCCTGCAACGACTTGTCCCTGAAAGCACACAAAGTTGTCTTGTCGGCATGCTCATCCTACTTTCAAAAACTACTCATGGAGAATCCTTGCAAGCATCCGACGATCATCATGCCTCAAGACGTTTGCTACGCGGATCTCAAGTTCATCATCGAGTTCGTCTACAAGGGGGAGATCGATGTATCCCAGTCGGAGCTCCAGTCGCTGCTGAAGACGGCCGATCAGTTGAAAATCAAAGGATTGTGCGATACACCGGACGAACAAGTGTATATCGGCGAGAACTCTTCGCAATTGATCAGCACTGACTTCTCCAAGATACGTCGTCTGTCGTCGCCCAAGCATCACACTGCCGACACACGGAAGACGAAGTGTAAGAAGAGCGACCGCCAACAGAAGGAAACAGATGCAACAACCGCACAGAGTGCAAGTGGCGCAGGTGAcgaattgcattcgcatgctAATGAAGCCAAAGAGGATGAAAGGAATACAGCTCTAAGTGATGATGATAAAAGCAGGAAGCGTCTGAATACGGATCAGAATATACTGAACATGAGCAGTAATGCTCTCTTGACTGGGCAGTTGCTGTTTTCGCAATTCGGTGTCGATAATGAAGATTTCTCACCTGATCCGCCAGCCCCAATGGCTATTCCTGTCGGTCATGTTGATATGCAAGAACATTCACCGACAAGAACACTGTTAACGAATTCGTCACTTCACAGAACTGATCTCTCAAATTCTCATATTAAGAATTCAGATATCAAACGAGAAATAAAATTCGAAACGTTACGTTCATCTTACACTTCAGAATCGCTTTTGGACATAGACAGCCACATGTCCGCGCATTCAATGGACAGCCACGATGGAGGTGATCCCAACCATCACACCACAATGATGATAACACCAGAGCTCACAAGTTTAATGCCTTTAGGATCTATGAGTGATCAAAGTACAAAATCCAACGGGCATTCCGAGCATTCCCATAGCTCCAGACATGGGGGTGGACCCAAAACTTGGACGCAAGAAGATATGGAACGCGCTTTGGACGCGCTACGAAATCATAACATGAGTTTAACTAAGGCATCTTCTACTTATGGAATTCCGTCAACTACCTTGTGGCAAAGAGCTCACCGGTTGGGCATTGATACACCAAAGAAGGAAGGACCGACGAAATCTTGGActgaagaaagtttaaattgtgcTTTGGAGGCTTTGCGAACAGGGACAATTTCTGCCAACAAGGCGAGCAAAGCGTATGGTATACCTTCCAGTACACTTTATAAAATTGCTCGACGCGAAGGAATTCGTCTGGCAGCTCCCTTCAACGCAGCACCAACAACATGGACGCCTGAGGATCTTGAGAAAGCGTTAGAATCCATTCGCTCTGGGCAAACTTCGGTTCAAAGGGCGAGCACCGAGTATGGCATTCCAACCGGAACACTTTATGGCCGGTGCAAACGTGAAGGTATTGAACTATCACGATCGAATCCCACTCCTTGGTCGGAGGACGCTATGGGAGAAGCTCTGGAAGCAGTTCGCCTTGGTCACATGTCTATAAATCAAGCTGCAATTCACTACAACTTACCCTACTCGTCCCTCTACGGCCGGTTCAAACGTGGAGCAAAGTATGATTCCGACTCGACTGATATTAATGTGGATACCCACTCTCAGCATGAGCCACCGCCTTTGATGATGGACTACACGAATTCGCATAATTCCCAAGTACAATACCACAATCACGCAAACAGCTGA
Protein Sequence: MSGQHYVLRWNNYQTNMTSVFHQLLQNEAFVDVTLACNDLSLKAHKVVLSACSSYFQKLLMENPCKHPTIIMPQDVCYADLKFIIEFVYKGEIDVSQSELQSLLKTADQLKIKGLCDTPDEQVYIGENSSQLISTDFSKIRRLSSPKHHTADTRKTKCKKSDRQQKETDATTAQSASGAGDELHSHANEAKEDERNTALSDDDKSRKRLNTDQNILNMSSNALLTGQLLFSQFGVDNEDFSPDPPAPMAIPVGHVDMQEHSPTRTLLTNSSLHRTDLSNSHIKNSDIKREIKFETLRSSYTSESLLDIDSHMSAHSMDSHDGGDPNHHTTMMITPELTSLMPLGSMSDQSTKSNGHSEHSHSSRHGGGPKTWTQEDMERALDALRNHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNCALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGAKYDSDSTDINVDTHSQHEPPPLMMDYTNSHNSQVQYHNHANS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00902152;
90% Identity: iTF_00049188;
80% Identity: iTF_00048725;