Basic Information

Gene Symbol
Arid2
Assembly
GCA_003054995.1
Location
NBZA01001143.1:7681-18394[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-18 3.1e-15 56.3 0.0 18 89 34 103 22 103 0.92

Sequence Information

Coding Sequence
ATGCGGCTGCAGTTGGCGAGTGAGCAACTGAGGAGCACAACGGCAGCCGCCTCGGTCATGGTGACGGCAACGTAtacgacgacggcggcggcagctcTGACTCCGTTTCGTCAACTGCCCAAGCTGAATGGGCGCGAGGTGGACCTGCATATGCTGTACACCCTCGTCAGCGAGCAAGGCGGATGGATGAAGGTGAATTCTAAGAATTCTTGGTCTGATTTCTTCGAGCCTCTGGAAGTCCCGGATAACTGCGTGAATGCAAGTGTAGCCCTGAAGCAAATTTATCTCAGGTACCTGGCGCGATGGGAGAAAGTCCATCTTGGCGACGAGGCCGATCGAGGgagcgacgacgacgaggagaACCGCCATAAACGGGGTGCATCTGCGCGCAATATGCACGCAGTATCTTCAATTTACAATTACCACCAGCACAATATTGCAGATGCAACCAGGGAGTTCAACAATCTGTCCACTGATTTGTACAAACCTTCGGATTATGATCGCTTAGGCCTTTCGCTGCTCTCGCCTCTTCCCAACGAGCAGGATTTTGCGATTAACGTCTGCACGCTACTCTCGAATGACGGCAAGCACACACTTAAACTGGAGAAACATCCCATTCTCTTAGACTATCTCCTTGCGCATGCCGGTGTGTTCAATCATGGCTCTCTAAGAAATGTCCTATCGTATAGCTACGTATGTATTCGGAAACAGAACATTAACACCTTCTGGAAGGAAGCGCTTGATTCCGAGGAGTTTCTGGATCTCACCAATGAAAATTTGTACATAAATGATGTGAAAAACACAGATGTGGTGCCCATTGTTGATCTCTCAAAGGAATTGGCGAAGGAAGACTGTCCGGTAACGCTCCTAACTCAGATTGACGATGATGAGTTGTTCGCCAGCGAAGTGAGTGCAGTGGAAACTATTTCTTCGCGGTCCAAGTCGAAATTTGACTTCGACCCCACAGACAAAGAACTTTTTAATCTAGGCCGAAATCTTGGCACACGGGATTACATGGGTCAGCGTGTTCTGCAAATCGCGACAATTCTTCGTAATTTGAGTTTCTTCGATGAGAACGTGTCCGTGTTGGTGCGTAATAGAACGTTTGTGCGATTTACGTTGCTGTGCGCGTGTTCAAAGTGGAACCAATTAATGAATCTTGGTTTGGAGATGCTTGGCAATCTCTCGGGCGAATTTCTTGTGAGGGACTTGGAACGGGACAAGATATCCAAGAGTATGATTAAGATTGTCACGCGAGGGTTGCAAATGGAGGATCGCAATTGGTGCATTACTGCGCTGGAAGTGCTGAACAAGTTGAGCCAGAATGAAGCCAATGAAGATATATTGCTGCGGTGCCTTGAACTGAGTGTGTACGAGCGCGTATGTTCATTCCTCACCATTCACGACGTGATGCTGTTGATCTATACGCTGGAGTGTCTTTATTCGTTATCGTCCTTAGGCGAGCGCGCCTGTAActatattgtaaatatatatgGCGCGGTGGATACTTTGGTGTCTCTGGTTACCGTCGAGGGTAAGAGCTACGGGCCAAAGGCTTGCATCGGTATGAAGCTGGTCGAGACAGTGACGGGCACTGCACCCGCTCAGCAACAGTCTGCGAGTAACTCgagcagcgtcgcgacgccaagTACGACGACCGTCAGCGTGTCCTCGACGAGTATCGCGTCGCCCAGTGCGCCGACTGCGGTTTTGGTTCAATCGCTCGTTCCGGTGAAAACAAGCGCGCCTTCAACCCCCATGCGACAAGTTGCTATCGCGCCGCAAAGACTTATCACTTCATCGCCATCACCAGCATCAACGGCAACATCAACAACCCCATCTGTTGCACAACCTATTGCCTCGCAGCAGTTGCAGCAGAAGCATGCTCATCAGCAGAGTATTCAGGAGAATGAACAATTCGCTCTGACATGGTTGCGAGCAACTTATGAATTAGCTTCTAATTGTAAAGTCGATCATCAGGAATTATACAAACACTACATTAACTCATGCGCAAAAATTGGGCGACGTGGTGTTATCGCTCCAAACCATTTTCCACGATGTGTCAGgTCGGTGTTCGGGGGAACCGTTGGACCAAATCCAGAAAAACCTGGGACGACGAATACACCTCAGTTTTACGAAGGCATTAAGGTGCGAGCACAACCACTGGTTATAAATGTTCAATCAACAACCACCCAAGTCACACCTACAATTACGTCCGCAAAGGGCGTCGTTGTGCGTCGAAAGCTCCCGTCCACAAATCCTATTACCCTGTCGCCTGACGCGTCCGCAGACCCGCCACCGGCTTCTCCAGCTTCCCCTATTCTGAAAGCACAGCTGAGTGCGCCTCCTAAACCCCGCGAGGCCGCGCCGGCCACCACTATAGCTGACGGTGCAAAGAGTCAGGTGATGGCGCATCCACATTTAAGTCAAGCGCTTTTGGGCAGTGGTTGCGCGAATGCGAGCACGACAAATTCGTCGTTGAATAAGGAACAAGGTCAAAGTAATACATCGCTCATCAAGAGTTTGTTGGCGACAAAGGTAAACGAATGCATGACCCCAGTCAGCATGAGGACAGACTGCCAATCAGTAGCTCAGGTTGCCGCtcgacaacaacaacaaaggcTCTTAGCGCAACAAAATCAACAGCAGCAAATCCAACAGGTTATACAGGAAGCAAAAACTCTTAAAACATTGGACACCACCAAGAATATACGCTTGAATGGTGCACGCCAATTGTTTCTCGAAAACGACGTTGCTGAATCAGTTGTTTCATCCACGACTCAAAGCCTTAATGCGAAAACGCGAAGGGAACCCCCACAGCCGCCACCTCCGTTGGCACCGTTGAGCAATATACGCAACAACAAAGTGAAGATCGAAAATGAGGACAGCGACTCCACGGGGAATAACTCGTTAGCGTCTAGTACTGGTGTTGGGAACATTGGTACTGGTGGTGTATCGTCTACAGAAGATGGTGAAAACTCAGTGAACAGCTTCGATGGCCTATTAAATGGAGTGCCCAGTGTCGAGAACCCCGTCTGTATGAACGAAGACAGCAATTCCAAAGACTCGTTAAAGAATAGTTCAAACGTAATCAAGAAGTCGCTAATGCTGGCCGATTTGCTTGAGAAAAAGGTGGATAAGGATCCACCAATATTAAACGGTGTAATGGGAAAGGAGCTGCGTATTGGTGAGAAGGGTCTTGAATTAGTGGAAAATCACGTCGATAAAGTATTAAACAAAGATTCCACAGTTGTCGAAGCGAAAGTGAATAACGTGGACGGACGCACAGAGGAAAGCGAAAAGGTTGGTGTTAAACGACCTGCCAGTGATACCATTGCCGAGCCGGAAGCGAAGAAACCACACTTGACGAACAATATCAATGGAAAAGAACGCACAGAAACACCACCAGTGGCTTCAGTATCACAACCAgttcaagtgcaagcgcaagcaccaCCACAACTCGCACCTACGCCCCCTCCGATATCAACAACAGTGGTGCAACAGGTTCAACAGCCACAGCAGCAACCGATGCGTCAAGTATTTGTGGATAGCAATCAACAAGTCATTATGTCTCAACCGCGGCAGATAATCGTCTCTCAAGCTCCTATGGTCCTCCCTACAGGGACTCAAATAAAAACGCAAGCTGGTCAAACCGTCATTGTACAAAATACAGCCCAACAACGGACAAATGTGGTACAATCAAGCATGGGACCCATTATACTATCGCAAGGCTTACAAGGCCTGCAGGGGCAAATGCAACTTGTGCCAAGTGGTCAACCGGGTCAATTTGTTTTGCAAGCCGCTGGTCATCAAGGATTTGTGGTAgcgcaacaaacaaactcacAAGGGCAATCACAGGCCGTATTATTGGCGCAAGCCCCACAACAGCAGGGAACAAAGACCATTATCATTCTGCAACCAAATTCAAATACCGCAACGCACCACCAGAAAGTGGTGATGACTCCCCAAGGGCAACAAATGGTTGTTACGCAAGTGCAACGCCCAATTATACAGCAGTCAACAGTTGGCAATATGGTTACAACAACGGGGGTGGTTAAATCTGCGACTGCAACTGTCGTAACTTCTCAGGCCAACCAGACTAATGGTGTTGCATCTCCGCAACCTCAGTTAGAGAAAAAGATGGAAATAAAAACAGAAGATTCAACAAAAATGGTAATGGCCACGATAGTTACATCGACTGTGACTACGAATGCTTCAACTGCTACTTGCACAGCTACAGTAGCAAACAAAATTAAGCCGAAGCCAACCAGAGATATTAACACGCTATACGTATGCGAATGGGGCGACTGTCAAGTAGATACAAAGTTTAAGTCAGCGAATCAAGTATTTTTGCACGTGTGTAAAATGCACATCCCTGATACGAACGATGAGCTGCTCTGTCAATGGGATCGTTGTGATAATATGAAGAGGAAGCGGTTTTCGCTAATGACACATATCAATGACAAACATTGCAATACTGAGtcTATGAAGGCGGCGCAAATAAAACGTAAACACATCCAACAAACGGGTAAAACTGATCCACCGGCACCGCCGCAAACCACACAGCATCCTGGCTACGCACCGGATGCCGCGTTCCATGCCATTAAACGGCATGCTCTCGAATTCGTCAACCCAAAGGAGTTACAAAGGTCTACTGTAAAGCAAGGAACACCTAGTGTTCCAAGTCCTATGCCCCGATCGGGCGCCTCTTCCGATCAGGACGATAACGAAGGACCAGTCACCAAGAGTATCAGACTGACTGCATCACTTATTCTAAGAAATCTCGTTATTTATAGCAACAATAGTAGAAGGTACTTAAAGCCCTATGAGCCGCACTTAGCGAATGTCGCCTTAAGCAACGTAGAGTCTTCTAGAACCATTGCACAAGTATTGTACGATTTGAATGAAGGGGCGAGTCACAGGTGA
Protein Sequence
MRLQLASEQLRSTTAAASVMVTATYTTTAAAALTPFRQLPKLNGREVDLHMLYTLVSEQGGWMKVNSKNSWSDFFEPLEVPDNCVNASVALKQIYLRYLARWEKVHLGDEADRGSDDDEENRHKRGASARNMHAVSSIYNYHQHNIADATREFNNLSTDLYKPSDYDRLGLSLLSPLPNEQDFAINVCTLLSNDGKHTLKLEKHPILLDYLLAHAGVFNHGSLRNVLSYSYVCIRKQNINTFWKEALDSEEFLDLTNENLYINDVKNTDVVPIVDLSKELAKEDCPVTLLTQIDDDELFASEVSAVETISSRSKSKFDFDPTDKELFNLGRNLGTRDYMGQRVLQIATILRNLSFFDENVSVLVRNRTFVRFTLLCACSKWNQLMNLGLEMLGNLSGEFLVRDLERDKISKSMIKIVTRGLQMEDRNWCITALEVLNKLSQNEANEDILLRCLELSVYERVCSFLTIHDVMLLIYTLECLYSLSSLGERACNYIVNIYGAVDTLVSLVTVEGKSYGPKACIGMKLVETVTGTAPAQQQSASNSSSVATPSTTTVSVSSTSIASPSAPTAVLVQSLVPVKTSAPSTPMRQVAIAPQRLITSSPSPASTATSTTPSVAQPIASQQLQQKHAHQQSIQENEQFALTWLRATYELASNCKVDHQELYKHYINSCAKIGRRGVIAPNHFPRCVRSVFGGTVGPNPEKPGTTNTPQFYEGIKVRAQPLVINVQSTTTQVTPTITSAKGVVVRRKLPSTNPITLSPDASADPPPASPASPILKAQLSAPPKPREAAPATTIADGAKSQVMAHPHLSQALLGSGCANASTTNSSLNKEQGQSNTSLIKSLLATKVNECMTPVSMRTDCQSVAQVAARQQQQRLLAQQNQQQQIQQVIQEAKTLKTLDTTKNIRLNGARQLFLENDVAESVVSSTTQSLNAKTRREPPQPPPPLAPLSNIRNNKVKIENEDSDSTGNNSLASSTGVGNIGTGGVSSTEDGENSVNSFDGLLNGVPSVENPVCMNEDSNSKDSLKNSSNVIKKSLMLADLLEKKVDKDPPILNGVMGKELRIGEKGLELVENHVDKVLNKDSTVVEAKVNNVDGRTEESEKVGVKRPASDTIAEPEAKKPHLTNNINGKERTETPPVASVSQPVQVQAQAPPQLAPTPPPISTTVVQQVQQPQQQPMRQVFVDSNQQVIMSQPRQIIVSQAPMVLPTGTQIKTQAGQTVIVQNTAQQRTNVVQSSMGPIILSQGLQGLQGQMQLVPSGQPGQFVLQAAGHQGFVVAQQTNSQGQSQAVLLAQAPQQQGTKTIIILQPNSNTATHHQKVVMTPQGQQMVVTQVQRPIIQQSTVGNMVTTTGVVKSATATVVTSQANQTNGVASPQPQLEKKMEIKTEDSTKMVMATIVTSTVTTNASTATCTATVANKIKPKPTRDINTLYVCEWGDCQVDTKFKSANQVFLHVCKMHIPDTNDELLCQWDRCDNMKRKRFSLMTHINDKHCNTESMKAAQIKRKHIQQTGKTDPPAPPQTTQHPGYAPDAAFHAIKRHALEFVNPKELQRSTVKQGTPSVPSPMPRSGASSDQDDNEGPVTKSIRLTASLILRNLVIYSNNSRRYLKPYEPHLANVALSNVESSRTIAQVLYDLNEGASHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00049045;
90% Identity
iTF_00048402;
80% Identity
iTF_00048402;