Ates014161.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- Prdm15
- Assembly
- GCA_963565655.1
- Location
- OY751425.1:3702033-3705133[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00092 0.077 13.6 2.7 3 23 278 299 277 299 0.94 2 13 2.5e-06 0.00021 21.7 0.5 3 23 447 467 445 467 0.97 3 13 0.0098 0.82 10.4 0.1 1 21 471 491 471 492 0.93 4 13 3e-06 0.00025 21.4 2.9 1 23 500 522 500 522 0.98 5 13 0.0048 0.4 11.4 3.1 3 20 528 545 527 546 0.94 6 13 0.00013 0.011 16.3 5.7 1 23 551 573 551 573 0.96 7 13 0.00088 0.073 13.7 0.4 2 23 594 615 593 615 0.96 8 13 0.0016 0.14 12.8 2.9 1 23 620 642 620 642 0.98 9 13 0.00083 0.07 13.7 0.1 2 23 648 669 647 669 0.95 10 13 0.0017 0.14 12.8 6.3 1 23 674 697 674 697 0.96 11 13 0.00011 0.0091 16.5 1.5 1 23 703 725 703 725 0.97 12 13 0.00011 0.0093 16.5 5.3 1 23 731 754 731 754 0.98 13 13 0.042 3.5 8.4 6.3 1 23 759 782 759 782 0.95
Sequence Information
- Coding Sequence
- ATGCCGCCATTGAAGAGAACAATGATAACAATAAACGAGAAAGtgaatgagaatgaggaaaaaaatgagacagaCAATTATTTAGCAGcttGCAATATATGTGGACAGGTCCACAATACTCATGACTGTCCATTTCTCCTCGATCTCCAATACgtCTCAGACACTCCACTGTTATCAAAAGCCCGTCAGACCCTTCCGAAGGACCTTGAGATAACGAAAATGGCAGACGGGAGCACAAGCATACTAACAAAACGTGAATTTCCGAGAGGCACAACCTTCGGTCCCTTCGAAGCGAAAAGAAACTGGACAATGAACCCAATgacaaattttccaattcGGATCTTCGGTTCCTCCCCAAAGGAAACTTACCACCTGGACTACTCAAACGAAGAAACCAGTAATTGGATGTGCTTCATAGCTCCGGCCTCCAGTGCAAAAgagcagaatttaatttgttatcAGATTAAAAACGACATATTCTACACAGCAATGCGAAAAATAGGAATTGGCGAAGAATTGCGAGTGTGGTACGCTCCATTCTACGccttaaaaatgaaaatgcctCTCTACAACATCGACTTTGCCTCAATGAACCCATCACTCCCAATGAAGGATCCTCAGTCATCAgcgagtgatgaaaaaaacgagcaGATCGAGTTATTGAACAAGGACATTGCGCAGGAACTCGCTGAGCGTCTACCAGCCCAGAAATTAGGTGCCAAAGACGATAAAGCTAATTGGAACTGTAAATTATGCTCTTCAATCATAAATTCAGTGCCCGCTTATGCTAAACACCTGATGGAGCATTACAAATCACTTTTGGGTGCATTCTGCAATCTTTGTAATCGGAAATTCTATAATTTGAGTTTATTACAGAAGCACAAAAACGAGAAGCATCCGGATAATGAGGCGATTGGAATACCGACTAGTGACAGTAATAAACAGGAGAATGCGCAAATGATCTTGCTGAATATGAGCGAGAATGATGGACAAACGTCTGACGCCATGAACGAAATTCTCGATAAACtgaagagtgaaaaatccataaatgaGTCGAGTGTCAAAGAGAAAATCAACGATTTACATTTATTAGACACAAACTCGATAAACGTCAATGATCTACTCCATAACAACAGTAATTTAATCGAGAATTCATCGTTGAAATCAATTCTCGAGAATCAATGCCTCAATATGAACCTGAGCACAATAACCGATTCAATCCTTTCAGATAATATTTCACCTGATCAAGTAAAATTCAACGTCGAAGAATTAACATCTGATCTCTTGGACATGCCTAATGATAACGATAATTTATCACAGAGGATTGATAATTTAGACTGCGATATTTGCGGTAAGAAATTCGATAAACCAGAGTACCTGTATCGTCATTTACGAAAACACACTGGTGAATTCATTTGTCCATCATGCCTAGCTGTTTTTGcgagaaaagagaatttagtGTCTCACGTCTGCTCGTACATGAAGAAGAGCGAGACATTCGAGTGTCCCTATTGCCAGAAGCAATTCACCGTGAAAAAGTACCTGAAGAGGCACATAACGAAGCACTCCGACAATAACAATTGCAAATGGTGCAGAAAATCATTCACATCATCAACTGAATTAGAGTCTCACAAGTGTCCAGCACCTCGTCACATCTGTGGACAATGCGGCAGAAGATTCGTGCATCGGGCTCACTTGAATCGTCACACAAAGCTCCACTCAAATCCAAAGccagtcatcaaaaaaatccgtaaGAAGAGTAACGAGGAGAAGCCTCTAATCTGCGAGAAATGCGGGGACTCTTTCAAGACCCCTTACATCCTCAAACAGCACTTGAGGTCCCATGGAGAACGAACCTTCGAATGTGAAATCTGCAAGAGAAGATTCCACAGAATAAGCGTGCTGAAGCAGCACAAGCAGATCCATCAGAATGCCCAAATCCCCTGCAACATCTGCGGCAAGAAACTAAAGTCTAAAAAGGCGCTGGATGTGCACGTGCTGCTGCATGGCAACAAGAAGTTCCAGTGTGAGAAGTGTGAAAAGAGCTTCTTCCAACGGTGCAATTACCTTAAGCATTACAAGCAGATTCATGGAGAGAAGATCATGTACAAGTGCCAGAATTGTCCAACGCAGTTCACCAGCGAGTCCAGTTATAATAAGCACGTTGATAGTCACATGAAACCGGCGGAATATTCGTGTTCTCAGTGTCAGAAGACTTTTCATGGACAGTACCAGCTGAAGAGGCACACGCAGACGAGTCATTCTGGGATTATTTACAGGTGCCCGTATTGTAAAATGACGGCGAGGCATAGGCACAGCATGAGGAGACATTTTGAGAGGCAGCACAAGATTCTCAGTGATGAATGGGATCGTCCGGGGTTTGTTAATCAATTGGAAGAGAGAACTGCGCAGGTTAATGGGGATTTTGGAGCATCGAGCAGTAGGGAGAGGAGTGTGCTCGTTCCTGGAGAGGAGAATTTTTCGGGGCCGGTTAATGATGCTGCTGGTGCTGCTGATGCAGAGGTCATGCTGCAGGTCAGCGAGGAGCAGAGAGAAATCGCAGAAAATCTGCAGATCAATGAAGTTCCGCAATTGAGCATCAGCGATTCTGATACGCAACTTGCTGAATCTGTTCTTGGGAATGCGTATATTTTTGGAGAGGATGGAGGGGATATCATGTTTTATGTTCTTGATAATGGGCCTGTTATCGCTGAGTATTAG
- Protein Sequence
- MPPLKRTMITINEKVNENEEKNETDNYLAACNICGQVHNTHDCPFLLDLQYVSDTPLLSKARQTLPKDLEITKMADGSTSILTKREFPRGTTFGPFEAKRNWTMNPMTNFPIRIFGSSPKETYHLDYSNEETSNWMCFIAPASSAKEQNLICYQIKNDIFYTAMRKIGIGEELRVWYAPFYALKMKMPLYNIDFASMNPSLPMKDPQSSASDEKNEQIELLNKDIAQELAERLPAQKLGAKDDKANWNCKLCSSIINSVPAYAKHLMEHYKSLLGAFCNLCNRKFYNLSLLQKHKNEKHPDNEAIGIPTSDSNKQENAQMILLNMSENDGQTSDAMNEILDKLKSEKSINESSVKEKINDLHLLDTNSINVNDLLHNNSNLIENSSLKSILENQCLNMNLSTITDSILSDNISPDQVKFNVEELTSDLLDMPNDNDNLSQRIDNLDCDICGKKFDKPEYLYRHLRKHTGEFICPSCLAVFARKENLVSHVCSYMKKSETFECPYCQKQFTVKKYLKRHITKHSDNNNCKWCRKSFTSSTELESHKCPAPRHICGQCGRRFVHRAHLNRHTKLHSNPKPVIKKIRKKSNEEKPLICEKCGDSFKTPYILKQHLRSHGERTFECEICKRRFHRISVLKQHKQIHQNAQIPCNICGKKLKSKKALDVHVLLHGNKKFQCEKCEKSFFQRCNYLKHYKQIHGEKIMYKCQNCPTQFTSESSYNKHVDSHMKPAEYSCSQCQKTFHGQYQLKRHTQTSHSGIIYRCPYCKMTARHRHSMRRHFERQHKILSDEWDRPGFVNQLEERTAQVNGDFGASSSRERSVLVPGEENFSGPVNDAAGAADAEVMLQVSEEQREIAENLQINEVPQLSISDSDTQLAESVLGNAYIFGEDGGDIMFYVLDNGPVIAEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046444;
- 90% Identity
- -
- 80% Identity
- -