Ates013340.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- -
- Assembly
- GCA_963565655.1
- Location
- OY751424.1:3459974-3464533[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 9.5e-05 0.0079 16.7 3.1 1 23 96 118 96 118 0.98 2 18 0.36 30 5.5 3.9 1 23 124 146 124 146 0.97 3 18 7.8e-07 6.5e-05 23.3 4.3 1 23 152 174 152 174 0.99 4 18 5.4e-05 0.0045 17.5 0.9 1 23 180 202 180 202 0.98 5 18 0.23 19 6.1 0.4 3 23 242 263 240 263 0.90 6 18 0.04 3.4 8.4 1.1 2 23 291 313 290 313 0.93 7 18 0.063 5.3 7.8 0.3 2 23 321 343 320 343 0.89 8 18 0.068 5.7 7.7 0.1 3 23 375 395 373 395 0.97 9 18 0.081 6.8 7.5 0.1 3 23 407 427 405 427 0.95 10 18 0.0015 0.13 12.9 0.1 3 23 438 459 436 459 0.94 11 18 3.3 2.8e+02 2.4 0.3 1 23 464 487 464 487 0.79 12 18 0.83 70 4.3 2.3 7 23 500 523 494 523 0.76 13 18 0.036 3 8.6 2.5 1 23 546 568 546 568 0.98 14 18 0.024 2 9.1 0.0 1 23 573 596 573 596 0.92 15 18 0.075 6.3 7.6 0.5 1 23 639 663 639 663 0.93 16 18 8.6e-05 0.0072 16.8 0.6 1 23 677 699 677 700 0.95 17 18 0.0004 0.034 14.7 0.5 1 23 709 732 709 732 0.96 18 18 6.9e-05 0.0058 17.1 4.2 1 23 894 916 894 916 0.98
Sequence Information
- Coding Sequence
- atgCTGTTCAAGGGTAACAGTTCAAGATTAGagtttctcattgaaaaaattcaagcacACAAAGAATCACCGTCACCTCTGCCCGATGAGAAGTGCAGTGTTAAATCAAAagATGGATTACTGGTCGGAAGTTACTCATGGAGAAGTGAGGAGGACAGTCTCACGTGTCAACGTGGTGGTGGTACACCATCATCATGTGCAACCTCCACATCATTGAGTTTTCCATCGGAAACTGAGACTGATGGTGATTTAAGAATCAACGATACCAATAATTCATCAGGTCCCTACTCCTGTCAATTCTGTGAAAAAGCCTTTCCAAGCTTGAGCTGTTTGAAGAAACACGAGCAGACCCATGGCGATCAGATGCCATACAGATGCAGCTGGTGCGCAAGATTGTTCAAACACAAACGTAGTAGAGATCGCCACGTTAAACTGCACACTGGGGACAGAAGATACCGTTGTACCCACTGTGAGGCAGCATTTTCACGAAGTGACCACCTGAAGATCCACATGAAGACTCACGACAATCAGAAGCCCTACCACTGCACCGAGTGCTCCAGAGGCTACAACACAGCAGCAGCCCTAACATCCCACATGCAGTCCCACAAGAGATCATCAAGCAGCCATTACCAGAGATCCCTGCCAACAGCATCACCACCTGCCTCTTCCCCAGACAATCCAACTCCAAAAATCCCTTATCTCCAATCTCCCCTTCACCTAGCCTGCATGTACTGCAGAGACACATTCTCAACGATGGAGCAGCTCCAGCTGCACGTTCATGCAGCTCACGAGTCCCTCTTCCCTCTCTCAAGTCCCTCATCTTCACCGAATGATCCTGATGGTCGAAGAAAAGAAGATCTCGAGGACCTGACTTGTCGAAGATGCTCTTCAAAATTCACAAAACTCTCGTCATTGAGAGAGCACCTTGTCTCAGCTCACAACGACGGTTTCTCCCCTTTAACCTGTCCCCTCTGCTCCAAGATCTGCTCTTCAGCAACTGCTTATGCAGAACACTACGTTCTCGAGCACTGCGAGAATAAAGACGTCGTCCCAGAGCCAAAGGATTCTATTGAGAAATTCTACGCTCCAAAGAACGAGAGCTTCTCCTCAAGCACTCTCCTCTGTGGCCAATGTGGAGCTGCTCTGAAGGACTTTGAGTCATTCAGAGCACATCTAGCTAAGCACCTCCATGCTGATCAGCCGAAGCCTGGGATTAATTGTCCAAAGTGTGAGTTAAAGTTCCAGGAGCGAGAGGACATGGTGATCCACTTGATGCAGCACTTTATGGGACAGGTCTTGAAGACATTCGGGTGCAATGGTTGTGAGAAGCTCTTCGGGGATTCTGAGAGTCTCCAGAAACACTTGCTGGAGGCTCACGCACATCATTTATACAGATGCAGCATTTGCAGGGACACTTTTGACTCAATCGTCGGCATCCAGGTGCATTTCACAGTTAAGCACACTCAAGAAGCCAGTCTCTATCACTGCAACTCCTGCAGAAGAAACGAGGACGACCACTGCAGCTTCAGAACCCCTGGAGAACTGCTGGAGCACGTGAAAACCATTCACGCCCCAGAAAACACCACTTCCCCCGGAAATTCAGTCTCAACCCCTGGAATCATCTCATCAAAGTTCTTCCGATGCTGCCTATGCggaattttcctctcatcaGACAACGATCTCCAGCATCACCTCGCCAGTCACTCCACCTGCTTCTTCCGTTGTCCAATCTGTCGAGAAGGCTTCCCAGTCGAATTCCTACTCGATCAGCACATAGCAGCTGCTCACAATTCTCCAAGACCTGATGATCCAGAGAACGAAAGAAGAAACTCCCTGAAACGACGAAGATCACCGGATTTCAATCTCAATCACACCGACAAGAGACTCATCCGTCCAAACTCAATACCAATTAATTACCGCTGTGATCTTTGTGATAGAAACGATTTCTCAAGCGATGCTGAACTCAAGAATCATCGGAAATCAGCCCACAAAATTATATCGAATAAAGTACAGAAGATTTCATCATCATTCATCTGTAGTTATTGTGGTGAGGGGTTGAGGACAAGAGTGGAGCTAGAGTCGCATACCAGAGTGCATCATGCACCTGGAGAACCTGGTAAAAAGCACAAGTGCAACATCTGCGATGAGGTCTTCTCTTCTGGTGGTCTTTTAGCAGAgcataaattgaagaaacattGTAAGATCCAGATGAGTGATGTTTGCATCGTTTGCAGGGGTGTTTTGGCTTCTGAGAGGGACTTTCTGGAGCATGTTCATAGGCACAGTGTCGAGGGAGAGGGAAGGGAAGGGGTTGTGAGCCACGTGCCTGCTCATTGTGTTGTTTGCAGGCAGACGCTTATTAGTGAGTTCGAGTGCCAACTTCATGCCAAGTTCCATCTGAGGAGCGATGATGGGGAGAGAGGGATTGAGGAGAGGGAGAATTGTTGCATTTGTTTGAGGGATGTTGAAGAGGGCATCAGTCTGCCGAATAAGGGCATTGGGTCGGAGAGTGAACAGGGGTTGAAGGTCTGCAGGAGGTGCTTTCTGAGGCACTCACAAGGATTGCCGATTCTGAGGTCTCCTTATGAGGATTGTCGGAGGGGTGGAGAAGGGGTTGCTGTCAAGGTGGAGGGGGAAGAGTGCTCTGGTTCGAAGgataaaaatgattcaGCCCGTCCATACAACTGTCCACACTGCAGCCTTAGTTTCACCTTTAGAAGTGAACTGGAGCATCATGTTACCACTCATGATAATAAAGATACATCAAAAGATACTCTAGACAGCGTTATTGTTAAAGAGGAGATTGTCATGAATACAGACGAGGATCAAAGTAACGAGAGAAGTGAAAAAGGTGCAGAGTACCATGACACCTCTGTGAACGATGCAGTTGACTAA
- Protein Sequence
- MLFKGNSSRLEFLIEKIQAHKESPSPLPDEKCSVKSKDGLLVGSYSWRSEEDSLTCQRGGGTPSSCATSTSLSFPSETETDGDLRINDTNNSSGPYSCQFCEKAFPSLSCLKKHEQTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDNQKPYHCTECSRGYNTAAALTSHMQSHKRSSSSHYQRSLPTASPPASSPDNPTPKIPYLQSPLHLACMYCRDTFSTMEQLQLHVHAAHESLFPLSSPSSSPNDPDGRRKEDLEDLTCRRCSSKFTKLSSLREHLVSAHNDGFSPLTCPLCSKICSSATAYAEHYVLEHCENKDVVPEPKDSIEKFYAPKNESFSSSTLLCGQCGAALKDFESFRAHLAKHLHADQPKPGINCPKCELKFQEREDMVIHLMQHFMGQVLKTFGCNGCEKLFGDSESLQKHLLEAHAHHLYRCSICRDTFDSIVGIQVHFTVKHTQEASLYHCNSCRRNEDDHCSFRTPGELLEHVKTIHAPENTTSPGNSVSTPGIISSKFFRCCLCGIFLSSDNDLQHHLASHSTCFFRCPICREGFPVEFLLDQHIAAAHNSPRPDDPENERRNSLKRRRSPDFNLNHTDKRLIRPNSIPINYRCDLCDRNDFSSDAELKNHRKSAHKIISNKVQKISSSFICSYCGEGLRTRVELESHTRVHHAPGEPGKKHKCNICDEVFSSGGLLAEHKLKKHCKIQMSDVCIVCRGVLASERDFLEHVHRHSVEGEGREGVVSHVPAHCVVCRQTLISEFECQLHAKFHLRSDDGERGIEERENCCICLRDVEEGISLPNKGIGSESEQGLKVCRRCFLRHSQGLPILRSPYEDCRRGGEGVAVKVEGEECSGSKDKNDSARPYNCPHCSLSFTFRSELEHHVTTHDNKDTSKDTLDSVIVKEEIVMNTDEDQSNERSEKGAEYHDTSVNDAVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046438; iTF_00047459;
- 90% Identity
- iTF_00046438; iTF_00047459;
- 80% Identity
- -