Basic Information

Insect: Aleiodes alternator
Gene Symbol: L
Assembly: GCA_963921955.1
Location: OY998107.1:816591-823792[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.8e-05 0.011 16.7 3.2 1 23 96 118 96 118 0.98

2 18 0.34 44 5.4 3.9 1 23 124 146 124 146 0.97

3 18 7.4e-07 9.5e-05 23.3 4.3 1 23 152 174 152 174 0.99

4 18 5.2e-05 0.0066 17.5 0.9 1 23 180 202 180 202 0.98

5 18 0.22 28 6.0 0.3 3 23 244 265 242 265 0.90

6 18 0.039 5 8.4 1.1 2 23 295 317 294 317 0.93

7 18 0.06 7.7 7.8 0.3 2 23 325 347 324 347 0.89

8 18 0.083 11 7.4 0.1 3 23 380 400 378 400 0.97

9 18 0.034 4.4 8.6 0.1 2 23 411 432 410 432 0.96

10 18 0.00014 0.018 16.1 0.2 3 23 443 464 441 464 0.94

11 18 5.6 7.2e+02 1.6 0.2 1 23 469 492 469 492 0.80

12 18 1.9 2.4e+02 3.1 1.6 7 23 505 528 499 528 0.74

13 18 0.016 2.1 9.6 1.0 1 23 551 573 551 573 0.98

14 18 0.0044 0.56 11.4 0.0 1 23 578 601 578 601 0.97

15 18 0.01 1.3 10.2 0.8 1 23 645 669 645 669 0.94

16 18 8.2e-05 0.011 16.8 0.6 1 23 683 705 683 706 0.95

17 18 0.00013 0.017 16.2 0.8 1 23 715 738 715 738 0.96

18 18 6.6e-05 0.0085 17.1 4.2 1 23 902 924 902 924 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.8e-05	0.011	16.7	3.2	1	23	96	118	96	118	0.98
2	18	0.34	44	5.4	3.9	1	23	124	146	124	146	0.97
3	18	7.4e-07	9.5e-05	23.3	4.3	1	23	152	174	152	174	0.99
4	18	5.2e-05	0.0066	17.5	0.9	1	23	180	202	180	202	0.98
5	18	0.22	28	6.0	0.3	3	23	244	265	242	265	0.90
6	18	0.039	5	8.4	1.1	2	23	295	317	294	317	0.93
7	18	0.06	7.7	7.8	0.3	2	23	325	347	324	347	0.89
8	18	0.083	11	7.4	0.1	3	23	380	400	378	400	0.97
9	18	0.034	4.4	8.6	0.1	2	23	411	432	410	432	0.96
10	18	0.00014	0.018	16.1	0.2	3	23	443	464	441	464	0.94
11	18	5.6	7.2e+02	1.6	0.2	1	23	469	492	469	492	0.80
12	18	1.9	2.4e+02	3.1	1.6	7	23	505	528	499	528	0.74
13	18	0.016	2.1	9.6	1.0	1	23	551	573	551	573	0.98
14	18	0.0044	0.56	11.4	0.0	1	23	578	601	578	601	0.97
15	18	0.01	1.3	10.2	0.8	1	23	645	669	645	669	0.94
16	18	8.2e-05	0.011	16.8	0.6	1	23	683	705	683	706	0.95
17	18	0.00013	0.017	16.2	0.8	1	23	715	738	715	738	0.96
18	18	6.6e-05	0.0085	17.1	4.2	1	23	902	924	902	924	0.98

Sequence Information

Coding Sequence: ATGCTGTTTAAAGGTAACAGTTCAAGATTGGAgtttctcattgaaaaaatacaagcacACAAAGAATCACCGTCACCTCTTCCCGATGAAAAGTGCAGTGTCAAGTCAAAAGATGGATTACTTGGTGGAAGTTATTCATGGCGAAGTGAGGAAGACAGTCTCACTTGTCAGCGTGGTGGTGGTACACCATCATCATGTGCAACATCCACGTCATTGAGTTTTCCATCAGAAACTGAAACAGAAGGTGATTTACGAATCAATGatccaaataattcatcagGTCCCTATGCCTGTCAATTCTGTGAAAAGACCTTTCCAAGCTTGAGCTGTCTGAAGAAACACGAGCAGACCCATGGCGATCAGATGCCATACAGATGCAGCTGGTGCGCAAGATTGTTCAAACACAAACGTAGTAGAGATCGCCACGTTAAACTGCACACTGGGGACAGAAGATACCGTTGTACCCACTGTGAGGCAGCATTTTCACGAAGTGATCATCTGAAGATCCACATGAAGACGCACGACAATCAGAAGCCATACCACTGTACCGAATGCTCGAGAGGCTACAATACAGCAGCAGCACTGACATCCCACATGCAGTCCCACAAGAGATCATCAAGCAGCAATTACCAGAGATCTCTGCCCACAGCTTCACCACCTGCCTCTTCCCCGGACAATCCAACTCCAAAAATCCCTTATCTCCAGTCTCCATTGCACCTAGCAATAGCCTGTATGTATTGTCGAGACACGTTCTCAACAATGGAGCAGCTCCAGCTGCACGTTCACGCAGCCCACGAGTCCCTCTTCCCTTTATCGAGTCCCTCATCTTCACCGAACGACCCTGCTGATGGCCACAGAAAAGCGGACGAGCTCGAGGACCTGACCTGCAGAAGATGCTCTTCGAAATTCACGAAACTCTCGTCCTTAAGGGAGCATCTCGTCTCAGCTCACAATGACGGCTTCTCCCCCCTTACCTGTCCTCTCTGCTCAAAAATCTGCTCATCTGCAACTGCCTACGCCGAGCATTACGTCCTCGAGCACTGCGAGAACAAGGATGCTGTTCCAGAACCAAAGGACTCTGTCGAAAAATTCTACGAGGCTCCAAAAAACGACAGCTTCTCTTCAAGTACCTTACTTTGCGGCCAATGTGGAGCCGCGCTCAAGGACTTCGAGTCCTTCAGGACCCACTTAGCTAAACATCTCCACGCCGATCAGCCACAACCCGGCATCAGCTGTCCAAAATGTGAGCTCAAGTTTCAGGAACGAGAGGATATGATCATCCATCTAATGCAGCACTTCATGGGTCAAGTCCTTAAGAAGTTTGGTTGCACTGGCTGCGAGAAGCTCTTCACAGACTCCGACAGTCTCCAGAAGCATCTGCTTGAAGCTCACGCACATCACCTGTACAGATGCGGAATCTGTCGAGACACATTCGATTCAGTTGTGGGAATTCAGGTCCATTTCACTGTTAAGCACACTCAAGAAGCAAGTCTTTATCACTGTAACTCCTGCAGAAGAAGCGAGGAGGAGCACTGCAGCTTCCGAACACCCGGAGAACTCCTGGAACACGTGAAAAATGTGCATGCCCCGGAAAACACTCCTTCCCCCGGAAATTCAGTATCGACTCCTGGCATCATAGCTTCTAAGTTCTTTCGATGCTGTCTCTGCGGAATCTTCTTATCATCGGACAACGATCTTCAGCAGCATCTCGCCAGTCACTCGACCTGCTTCTTTCGGTGTCCGATCTGTCGAGAAGGCTTTCCAGTTGAGTTTCTGCTTGATCAGCACATAGCAACTGCTCACAATTCATTAGGAAGAGCTGATGATCCAGACAAGGACAGACGTAATCTCCTCAAACGACGAAGATCCCCAGATTTTGATGTTAATCACATCGAAAAGAGACTTATCCGTCCAAATTCAATGCCTGTTAGCTATCGCTGTGATCTTTGCGACAGAAATGATTTCTCGAGCGATTCTGAGCTGAAGAATCATCGGAAAACTGCTCACAAGACTATATCAAGCAAAGTTCAGAAGCTGTCATCTTCGTTCATCTGCAGTTATTGTGGTGAGGGACTGAGGACCAGAGTGGAGCTCGAGTCGCATACGAGAGTGCATCATGCACCTGGTGAACCTGGCAAAAGGCACAAGTGCAATATATGCGATGAGGTTTTTTCGTCTGGCAGTCTTTTGGCTGagcacaaattgaagaaacacTGCAAGATTCAAATGAGCGATGTTTGCATCGTTTGCAGGGGTATTCTTGCCTCGGAGCGGGACTTTTTGGAGCATGTTTACAGGCACAGtatggagggggaggggagggaggggctTGTGAGCCACGTGCCTGCTCATTGTGTCGTTTGTAGGCAGACGCTTATTAGCGAATTCGAGTGCCAACTTCATGCCAAGTTTCATCTGAGAAACGAGGGGGATGGAGAGAGGGGGACTGAGGAGAGGGAGAATTGTTGCATTTGCTTGAGGGATGTGGGGGAGGGAATCAGCCTGCCGAATAAGACAGTTGGAGCTGAGAATGAAGTGGGGCTGAAGGTATGCAGGAGGTGCTTCTTGAGGCACTCGCAGGGGCTACCTATTTTGAGGTCTCCTTATGAGGATTGTAGGGGAGAAGATGGAGAAGGGGTTGCTGTTAAGGTGGAGGGGGAGGAGTGCTCTGGTTCGAAGGATAACAATGATTCAGCCCGTCCATACAACTGTCCACACTGCAGCCTTAGTTTCACCTTTAGAAGTGAACTGGAGCATCATGTTACAActcatgataataatgatacatCAAAAGATACACTAGACAGTGTTATTGTTAAAGAGGAAATTGTCATGAATACAGACGAGGATCAAAGTAATgagagaagtgaaaaaagtgcAGAGTACCATGACACCTCTGCAAACGATGAAGTTGACTAA
Protein Sequence: MLFKGNSSRLEFLIEKIQAHKESPSPLPDEKCSVKSKDGLLGGSYSWRSEEDSLTCQRGGGTPSSCATSTSLSFPSETETEGDLRINDPNNSSGPYACQFCEKTFPSLSCLKKHEQTHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTHCEAAFSRSDHLKIHMKTHDNQKPYHCTECSRGYNTAAALTSHMQSHKRSSSSNYQRSLPTASPPASSPDNPTPKIPYLQSPLHLAIACMYCRDTFSTMEQLQLHVHAAHESLFPLSSPSSSPNDPADGHRKADELEDLTCRRCSSKFTKLSSLREHLVSAHNDGFSPLTCPLCSKICSSATAYAEHYVLEHCENKDAVPEPKDSVEKFYEAPKNDSFSSSTLLCGQCGAALKDFESFRTHLAKHLHADQPQPGISCPKCELKFQEREDMIIHLMQHFMGQVLKKFGCTGCEKLFTDSDSLQKHLLEAHAHHLYRCGICRDTFDSVVGIQVHFTVKHTQEASLYHCNSCRRSEEEHCSFRTPGELLEHVKNVHAPENTPSPGNSVSTPGIIASKFFRCCLCGIFLSSDNDLQQHLASHSTCFFRCPICREGFPVEFLLDQHIATAHNSLGRADDPDKDRRNLLKRRRSPDFDVNHIEKRLIRPNSMPVSYRCDLCDRNDFSSDSELKNHRKTAHKTISSKVQKLSSSFICSYCGEGLRTRVELESHTRVHHAPGEPGKRHKCNICDEVFSSGSLLAEHKLKKHCKIQMSDVCIVCRGILASERDFLEHVYRHSMEGEGREGLVSHVPAHCVVCRQTLISEFECQLHAKFHLRNEGDGERGTEERENCCICLRDVGEGISLPNKTVGAENEVGLKVCRRCFLRHSQGLPILRSPYEDCRGEDGEGVAVKVEGEECSGSKDNNDSARPYNCPHCSLSFTFRSELEHHVTTHDNNDTSKDTLDSVIVKEEIVMNTDEDQSNERSEKSAEYHDTSANDEVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00048156;
90% Identity: iTF_00048156;
80% Identity: -