Basic Information

Insect: Aleiodes testaceus
Gene Symbol: -
Assembly: GCA_963565655.1
Location: OY751427.1:3306945-3309740[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.03 2.5 8.8 0.4 6 21 12 27 6 28 0.86

2 14 0.21 17 6.2 0.0 2 20 34 52 33 53 0.93

3 14 2.4 2e+02 2.9 0.2 1 12 224 235 224 244 0.89

4 14 0.032 2.7 8.7 2.4 1 20 347 366 347 368 0.94

5 14 5.8e-05 0.0049 17.4 1.3 3 23 374 394 373 394 0.96

6 14 0.00012 0.0097 16.4 2.6 1 23 404 426 404 426 0.95

7 14 0.055 4.6 8.0 0.1 1 23 445 466 445 466 0.89

8 14 0.0013 0.11 13.1 0.1 2 23 472 493 471 493 0.95

9 14 4.6e-05 0.0038 17.7 4.8 1 23 530 552 530 552 0.99

10 14 2e-06 0.00017 22.0 3.7 1 23 558 580 558 580 0.96

11 14 8.7e-05 0.0073 16.8 5.1 1 23 586 608 586 608 0.98

12 14 4.3e-05 0.0036 17.8 1.2 1 23 614 636 614 636 0.98

13 14 0.00023 0.019 15.5 0.1 1 23 640 662 640 662 0.98

14 14 0.00011 0.0096 16.5 0.2 1 23 670 692 670 692 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.03	2.5	8.8	0.4	6	21	12	27	6	28	0.86
2	14	0.21	17	6.2	0.0	2	20	34	52	33	53	0.93
3	14	2.4	2e+02	2.9	0.2	1	12	224	235	224	244	0.89
4	14	0.032	2.7	8.7	2.4	1	20	347	366	347	368	0.94
5	14	5.8e-05	0.0049	17.4	1.3	3	23	374	394	373	394	0.96
6	14	0.00012	0.0097	16.4	2.6	1	23	404	426	404	426	0.95
7	14	0.055	4.6	8.0	0.1	1	23	445	466	445	466	0.89
8	14	0.0013	0.11	13.1	0.1	2	23	472	493	471	493	0.95
9	14	4.6e-05	0.0038	17.7	4.8	1	23	530	552	530	552	0.99
10	14	2e-06	0.00017	22.0	3.7	1	23	558	580	558	580	0.96
11	14	8.7e-05	0.0073	16.8	5.1	1	23	586	608	586	608	0.98
12	14	4.3e-05	0.0036	17.8	1.2	1	23	614	636	614	636	0.98
13	14	0.00023	0.019	15.5	0.1	1	23	640	662	640	662	0.98
14	14	0.00011	0.0096	16.5	0.2	1	23	670	692	670	692	0.98

Sequence Information

Coding Sequence: atgggatcttcaattttaatttgtccCATGTGCTGTGGTGAAACATTTAACAGTTCACAATCACTCAAATATCATTTACTTAGTATGACTGATAATTTATATTGTCCTGGTTGCTCAAAAAGATCAGATTCAGTTGCTGCATTGATACAGCATCTTGATGCCTGTGGTAATGGTAATAATGTCACATTTGAAGAGACTGTTGGAGAGATTAAAATTGGTGACAATGAAGTCTTAATGGACACAAATGTTGAACAAATTCACGAGAGTTTTTTAGCTGGCGTTGACAACGAGGGAATCATGATTGTTGGTGGTCCTCGAACGAttgaagttgatgaaaatggTCAAATAAAAATGGTGCAGACGAGGGAAAATCCTGACACTGCGAAACGAGAATCAATTCTTCCGGACGACGAATACCAGGGACTCGAGAAGATCGACGATGACGAGTCATCAGTCTCCGCTATCGAGGAAAAGGAGACTGACGAAAACACACCAGTAATAAGTATCCCAGAAAATCACGACGATAAAACTGACGAGAATGACGTCATAATCTTCCATGAAGATACAACTGAGTTCCTCGAGGACGAGCAGAGTTTCATGGAGTTGAATGAGGATGAAGTGAACGAGATTGGTGAAGACGAGTTGATGAagATTGACGCATCAGCCTTGTACAGCTGCAGCAGTTGCGGTATGGGTTTCAACTCGGTCCTGGACCACATAAAAGAGTACCACGACGGTCAGGAAGTGGTCCTGGAGATGGCTGACGACGAAACGACCCCCAGCCTCGAACCACCCGAAGAAAAACCCGAAAATCCCCGAGTTCCCCGAACAAAACGCCAAAAAATGAACACAATAAAGACTGAAGAATGCATCGACAGCGAGGGCAGGCTCTACATCCGCAACGTCGTGCAGATCGAGCCCTTCTGGGAGCGTTCATCACCTCAAACAACCGTCAAAGCGACTCCCATGATCGAGAAATTCTTCTCAAACACCGAGGGAATAAAAACCCGTTCGAAATCCGAGACAATCCCTAAGCAGTACCGCTGCAACCACTGCAGCTCCGAATTTCCCCGTCTAACAGAATTCCGTAATCACGCGTGCATCGACGGCATCAACCACTGTGCAACCTGCGGCCAGACATTCGCAAATCTCAAGGCTCTCCAGAACCACATGAAACTCCATGACAACGAGAACCACGAAAAACGCACGTTCCTCTGCACAATCTGCGGCACAGAGTTCTCCTCCCACAAGAGCCTGCGTCTGCACTCTCGCATGCACGCTCCCGTACGTGAAAGACACGTCGACGCACCCGAAGGAACCGGAGACAACAATTTCACCTGTCTCGAATGCGGAAAAACGCTTTCCGAGTCTTACAAAGCCGCGCACATGGCTCTTCATAGTGGTGACACGGTTACCTGTGGTATTTGCAATAGGAAATTTGATTCGACGGAGTCGTTGACGATGCACGCGGCTGTTCACCCGGAATTGGGGATTGGACAGAGGGGGACGACTCCGTCGCCAACACCGGCGAGTGATAATGGGAGTCTtgggaataatgagaatgataatGGGGATTTGACGAAGCCTTATCAGTGTCAGCATTGTGGGAGGAGGTTCACGAGACCGCATGAGAAGGTGAAGCATGAGAGGATTCATACGGGAGAGAAACCGCATGCTTGTGAGGTTTGCGGCAAGACTTTCCGAGTGTCTTATTGTTTGACATTACACATGAGGACTCATACAGGCGTTCGGCCGTACGAGTGCAAACATTGTGGGAAACGATTTAAGGCGTCTTCGGTCTACAATCATCATCTGTTGACTCATGGGGAGGAACGGGCCTACAAGTGCCCTTTCTGCGTTAAGACGTTTAAGACTCGGGTGCAATTAGCTGGACACAAAAATAGTCATACGAAACCGTTCAGGTGTACTGAATGCTCCCGACCGTTTGCTTCACTTTATGCAGCACGTGCACATATTGCAACGCacaaaaaagataataatctGAAATTCAGTTGCTTTATCTGTGGGGCTTCTTATGGACGTGCTTTTGCGTTGAATGATCACATGAAGAATCATGGGAATGATACGTTACCGGCGCCGGAACCCGCGAGAGAAGAGGAAGTTCATGAGGATTATCTtattgatgatgaagaaataacTGAGGAAGAATTAGTTCATGGAATCAATCCggatattcaattgaatgaaacgGGGATTAAGAAATTCGATGACTCTGATtga
Protein Sequence: MGSSILICPMCCGETFNSSQSLKYHLLSMTDNLYCPGCSKRSDSVAALIQHLDACGNGNNVTFEETVGEIKIGDNEVLMDTNVEQIHESFLAGVDNEGIMIVGGPRTIEVDENGQIKMVQTRENPDTAKRESILPDDEYQGLEKIDDDESSVSAIEEKETDENTPVISIPENHDDKTDENDVIIFHEDTTEFLEDEQSFMELNEDEVNEIGEDELMKIDASALYSCSSCGMGFNSVLDHIKEYHDGQEVVLEMADDETTPSLEPPEEKPENPRVPRTKRQKMNTIKTEECIDSEGRLYIRNVVQIEPFWERSSPQTTVKATPMIEKFFSNTEGIKTRSKSETIPKQYRCNHCSSEFPRLTEFRNHACIDGINHCATCGQTFANLKALQNHMKLHDNENHEKRTFLCTICGTEFSSHKSLRLHSRMHAPVRERHVDAPEGTGDNNFTCLECGKTLSESYKAAHMALHSGDTVTCGICNRKFDSTESLTMHAAVHPELGIGQRGTTPSPTPASDNGSLGNNENDNGDLTKPYQCQHCGRRFTRPHEKVKHERIHTGEKPHACEVCGKTFRVSYCLTLHMRTHTGVRPYECKHCGKRFKASSVYNHHLLTHGEERAYKCPFCVKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIATHKKDNNLKFSCFICGASYGRAFALNDHMKNHGNDTLPAPEPAREEEVHEDYLIDDEEITEEELVHGINPDIQLNETGIKKFDDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00047452; iTF_00046434;
90% Identity: iTF_00047452; iTF_00046434;
80% Identity: -