Ates006365.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- -
- Assembly
- GCA_963565655.1
- Location
- OY751417.1:777760-782014[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0047 0.39 11.4 2.3 1 23 333 355 333 355 0.97 2 19 0.015 1.3 9.8 0.5 2 23 389 410 388 410 0.96 3 19 0.0019 0.16 12.7 3.1 1 23 468 490 468 490 0.94 4 19 0.00062 0.052 14.1 0.8 2 23 494 515 494 515 0.98 5 19 0.00051 0.042 14.4 1.9 2 23 553 574 552 574 0.97 6 19 0.00092 0.077 13.6 5.1 1 23 579 601 579 601 0.96 7 19 0.0013 0.11 13.1 0.3 1 21 607 627 607 631 0.92 8 19 0.0002 0.017 15.7 2.3 2 23 702 723 701 723 0.95 9 19 0.0002 0.016 15.7 5.0 1 23 777 799 777 799 0.97 10 19 0.00028 0.023 15.2 0.7 1 20 804 823 804 825 0.94 11 19 0.15 13 6.6 0.3 2 23 836 857 836 857 0.97 12 19 3.9e-05 0.0033 17.9 1.7 2 23 896 917 895 917 0.97 13 19 2.6e-05 0.0022 18.5 1.6 1 23 922 944 922 944 0.95 14 19 0.00027 0.023 15.3 1.9 1 23 950 972 950 972 0.98 15 19 7.8e-06 0.00065 20.1 0.4 1 23 989 1011 989 1011 0.95 16 19 1.5e-06 0.00012 22.4 0.3 1 23 1017 1039 1017 1039 0.99 17 19 2.7e-05 0.0023 18.4 0.3 1 23 1045 1067 1045 1067 0.98 18 19 0.00015 0.012 16.1 4.1 1 23 1073 1095 1073 1095 0.96 19 19 0.011 0.88 10.3 0.4 1 20 1101 1120 1101 1122 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCGTTGGTATTGATACGTCTGAACCGTCACAGGCTGATGATGAGCCTGTTGAatcaattgttgaaatttgtCGTGTTTGTTTACAcggtaatttaataatgagagaTTTATTCATTGGTAATCAAATTGACTCATTGTCAACTAAAGCAATGAGTTTTGCAAGAGTTAAGatGACACCAGGTGATGGATTACCAACTCAAGTCTGTTGCGATTGTGCGGAAAAGTTAGAATCAGCTTACGAGTTCAAACTGCAGGTTGAACAAGCCGACAGTGCTCTTCGTGAGCGTTACGAGGCCCTGAACATAAAAGAAGAGCTTTACTTCAACGAAGTTGAAGTGCACTTGGAAGCGGATCGTCATGCAAATGTGCAGGACATAGACGTTGATGCGCAATACGACGAAGCAGCTGTAACATTAAATGTAGCCGAGAAATCGGATTTGCTGAAGGATCATTTAGCATTACTTGAAGTCGAGAAACTCGCAGCAAGTGAACACGTTTTAGAAGAATCAGAGATCGTTCCCAATGACACGCAGAATGACGCATTAAAGCAACAAATTCTCCAAACTGAAGACGAATATCTCGACGATGAAACGAGTGAACAACAAATATTGGATTCTAATGACGAAGAAATAAAACCGGAGAACGAAGGAATTAATATCGGTGAACATGATTACATCGTGCAAGATCGTTACACTTTAACGAACGAACAAGAACACGAATTAATGCAgcaagaaaatgatgaaaatggtTCACAAGGATTTCCAACATTAATGTTGGATGATGACGAGTCTGACGGCGTTTCTGAAACTCAAATTCacatgaaagaaaatcaagaaatcaatgaaaccGATAAAATTAACGATGATAAGATAAAAATGTCATCTCGTGAAAATTCTGAGCACAATTCGGACGAAGATAATtactttgagaatttaaatttaagcAGCAGACTCAAGCAATTTCAGGATGATAAATCAGACAAAGTTTATTTCATGTGTTATCTATGTGACAAACAATTTGTGTctaaagaaatattaaaagagCACATGCACTCGCATGAAGAAGTGAGAAAGACactgtcattaaaaaaaacatcggATAAATCTCCGAAAAATGctggaattcaaaaaattcaaccgtctggaaaaaaatctaataaatGTCCATATTGTGGTAAAGAATATCTCTACGTCATATCATTTAATAAACACATAAAGCAGCATGAGAAGAATGAAGAcgaaattaaagataattttgattcaatgaaagaaGGAGAAGACTCAGATTCCGATGATTTTGATAATACCGAGACATTCGAAgtgattcatgaaaatacatcagataatctcaattttacAAATCACAATAGTGAGAATAATGAAGGGCAAGAGATATATTTTTGCCGAAAATGTCCGGAAAAATTCCCAACACAAACTGATCTTAATCGTCACAATCTCCACCACAGCCCGGAAAAATGCAGTATTTGTGACGAAGAATTCGAcacaatagaaaaattaaaaactcatCGTTCAACTCATGTGATGGAAGGTGTCTTAACCGAAGAAGATTTACGCgatgaattatcagaaatgTGCAGCAAAGAAtacgatgaaaataatcaaataaatgacGAAATTCCAAGTGATTTGAAATGTACAAATTGTTCAATGACATTTATGAGTAAAAAATTGCTCCTAAAGCACATGGATTCGCACGAGCGTATGAAGTACAGATGTAAACTATGTCATCAAGAATTCGTAAAAAAAGAGCACTTGCGAAAACATGCGGAACAGCATGCGAGAGTTAAAATTTACAAGTGCACAGATTGCTCGAAAATTTTTGGTAATGAATTGACCCTGAGAAATCATCTAATTGCGACGAATCATAAAACGATTGTTCAAGGTGAAGAGTATGATCCTAAcaagaggataaaaagagtTGCTGCAAGAGCTGCGCAAaagataattgataaaattaaaactgAGGATAGTTTAGATGATTTGGAAAGAGATGATAATGACGTATTTATCGGTGATTCTTCATTACAAAGAAGTGAAGATAAATTGCAATCAAAACGTGGAAACAGAAAGGATTTAGAATGTGCAACATGCGGAAAGAAATGCAGTTCAAAACAATATTTACTGAGACATATGGAGCAGCACAGTAGAGAcgagaaaaatgaacaattggAGAGATCTAAAAAGAGTACAGATATGAaggaattccaaaaaaattgcgACATGAGTGTATTCGGTAGAGACgacgatgataatgatgatgatgatgattttgaGAGTGGTTTAGATTGGCCAATGGACACGCACGAGTGCACAACATGTAAAAAACGTTATTCAActaaaaaatcacttttacGTCATCAATTGCTTCATGAAGAGCCGAATTTCGAGTGTGACATATGTAATGTGAAGTTTTACagaaaagataaattaaaagCGCATTATGATAAGTGCTCGGAAAAGAATCCAGATCAAGTGAGAAAATGCAATATTTGCGgtgatatttttgaaaataatgaaattttacgagAACACAGATCGAAGCATGTGGATGAGGGAATATTAACTGAGGAAGATTTACGTGAATTGGAGCCGGGTTCAGAGGAGAGAAAACAGGGTGAAAAAATAGCACGTAAGAGACGTACTGATATCGTTGGATTAGAATGCACCGAATGTAACAAACATTACACATCACGCAAGGGATTACTCCGACACATTCAAGTGCACGAgggtaaaaaatatttatgcgACATTTGTCCGAAGAAATTTTATCGTCGTGAGCACTTGAAGATTCATGTTGCCAAGCATAACATGGTGAAGCCGTACAAATGCACGAGATGTTCAAAAAGATTCATAAAAGAGGAGCAACTTTCTGCACATTTAACTAAACACGAGAGAACATTTAAGAAGAATAAGGATACTGATAATACGTCAAAAAGATTTTTATGTGAAATATGTTCAAAGAGTTTCACGCAGTCTACGACATTGGTAGCGCATTTGCGAGCTCATAATGGTATAAAACCGTATGTTTGTGAGGTTTGTGCGAGACCGTTTACGACAAATGCTTATTTGAAAATGCACATGAGAACGCATACACAAGAGAGGCCATACAGTTGTCAGTATTGTTCGAGAGCATTTGCCAGAGCTGATACATTAGCTAATCACTTGACATCACACACTGGAGAAGCGAAATATCATTGTAAATATTGTCCGAAGAATTTCAGACGGCTAAAGTCATTGAAGGAACACGTTTTCATTCATACCGGACAACGGCCCTATGCATGCCCAACTTGTGACCGCAGATTTAATAACAATGGGAGCAGATATGCGCATTCAAAGAGGTGCAAGCAGAATCTACTGCAGAACCAAACGAGAAATCAAAATCAGGTGCAGGTTCAGAGTCAAGTGCAGAATGTCGCTATGGAGCCCCAGAATCAGGCGCAAGTGCAGCAGATTCAACAGGTGCAACAGGTGCAGATTCAACGACAGAATCCTACGCAGACTATCAGATTAACGCAAGCTGTTGGATCGGCTATGCAAGTTGTGCAGTCGAAGAATATTAAGACTATTACTATTACGCGACAGGCGGATCAAATCGGACAGCATCAAGTCATTCAACATCAGGAATTACTTATGCCACTTATTTTACCGTTGACTGTTACTCTGGCTGATGGAGATGAAGAAGTTATATTACCTGAGGGAACAAAAATCTTTACTACTACGTAG
- Protein Sequence
- MDAVGIDTSEPSQADDEPVESIVEICRVCLHGNLIMRDLFIGNQIDSLSTKAMSFARVKMTPGDGLPTQVCCDCAEKLESAYEFKLQVEQADSALRERYEALNIKEELYFNEVEVHLEADRHANVQDIDVDAQYDEAAVTLNVAEKSDLLKDHLALLEVEKLAASEHVLEESEIVPNDTQNDALKQQILQTEDEYLDDETSEQQILDSNDEEIKPENEGINIGEHDYIVQDRYTLTNEQEHELMQQENDENGSQGFPTLMLDDDESDGVSETQIHMKENQEINETDKINDDKIKMSSRENSEHNSDEDNYFENLNLSSRLKQFQDDKSDKVYFMCYLCDKQFVSKEILKEHMHSHEEVRKTLSLKKTSDKSPKNAGIQKIQPSGKKSNKCPYCGKEYLYVISFNKHIKQHEKNEDEIKDNFDSMKEGEDSDSDDFDNTETFEVIHENTSDNLNFTNHNSENNEGQEIYFCRKCPEKFPTQTDLNRHNLHHSPEKCSICDEEFDTIEKLKTHRSTHVMEGVLTEEDLRDELSEMCSKEYDENNQINDEIPSDLKCTNCSMTFMSKKLLLKHMDSHERMKYRCKLCHQEFVKKEHLRKHAEQHARVKIYKCTDCSKIFGNELTLRNHLIATNHKTIVQGEEYDPNKRIKRVAARAAQKIIDKIKTEDSLDDLERDDNDVFIGDSSLQRSEDKLQSKRGNRKDLECATCGKKCSSKQYLLRHMEQHSRDEKNEQLERSKKSTDMKEFQKNCDMSVFGRDDDDNDDDDDFESGLDWPMDTHECTTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDIFENNEILREHRSKHVDEGILTEEDLRELEPGSEERKQGEKIARKRRTDIVGLECTECNKHYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCTRCSKRFIKEEQLSAHLTKHERTFKKNKDTDNTSKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYSCQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLLQNQTRNQNQVQVQSQVQNVAMEPQNQAQVQQIQQVQQVQIQRQNPTQTIRLTQAVGSAMQVVQSKNIKTITITRQADQIGQHQVIQHQELLMPLILPLTVTLADGDEEVILPEGTKIFTTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00046417;
- 90% Identity
- -
- 80% Identity
- -