Basic Information

Insect: Aleiodes leptofemur
Gene Symbol: gtf3a_1
Assembly: GCA_963942555.1
Location: OZ012614.1:827631-834506[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.012 1.8 10.0 0.2 3 23 682 702 680 702 0.96

2 17 0.016 2.4 9.6 0.4 1 17 708 724 708 728 0.85

3 17 0.37 55 5.3 1.3 2 23 735 756 734 756 0.96

4 17 7.3e-05 0.011 17.0 1.2 3 23 765 786 764 786 0.98

5 17 0.0034 0.51 11.7 2.1 1 23 793 816 793 816 0.95

6 17 8.4e-05 0.013 16.8 0.7 1 23 822 845 822 845 0.94

7 17 0.57 85 4.7 0.9 2 23 853 873 853 873 0.94

8 17 1.2e-07 1.8e-05 25.7 2.1 2 23 879 900 878 900 0.97

9 17 2e-06 0.0003 21.9 0.2 1 23 906 928 906 928 0.99

10 17 0.0038 0.57 11.6 2.8 2 23 940 962 939 962 0.95

11 17 0.4 60 5.2 2.6 1 23 968 991 968 991 0.92

12 17 0.0011 0.17 13.2 2.8 2 23 1013 1035 1012 1035 0.95

13 17 0.0011 0.17 13.2 0.8 2 23 1042 1064 1041 1064 0.96

14 17 3.6e-05 0.0054 18.0 1.7 2 23 1072 1093 1071 1093 0.97

15 17 0.0011 0.16 13.3 2.3 1 23 1099 1122 1099 1122 0.96

16 17 0.29 43 5.7 3.2 2 23 1129 1150 1128 1150 0.96

17 17 0.16 24 6.5 2.2 1 23 1156 1178 1156 1178 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.012	1.8	10.0	0.2	3	23	682	702	680	702	0.96
2	17	0.016	2.4	9.6	0.4	1	17	708	724	708	728	0.85
3	17	0.37	55	5.3	1.3	2	23	735	756	734	756	0.96
4	17	7.3e-05	0.011	17.0	1.2	3	23	765	786	764	786	0.98
5	17	0.0034	0.51	11.7	2.1	1	23	793	816	793	816	0.95
6	17	8.4e-05	0.013	16.8	0.7	1	23	822	845	822	845	0.94
7	17	0.57	85	4.7	0.9	2	23	853	873	853	873	0.94
8	17	1.2e-07	1.8e-05	25.7	2.1	2	23	879	900	878	900	0.97
9	17	2e-06	0.0003	21.9	0.2	1	23	906	928	906	928	0.99
10	17	0.0038	0.57	11.6	2.8	2	23	940	962	939	962	0.95
11	17	0.4	60	5.2	2.6	1	23	968	991	968	991	0.92
12	17	0.0011	0.17	13.2	2.8	2	23	1013	1035	1012	1035	0.95
13	17	0.0011	0.17	13.2	0.8	2	23	1042	1064	1041	1064	0.96
14	17	3.6e-05	0.0054	18.0	1.7	2	23	1072	1093	1071	1093	0.97
15	17	0.0011	0.16	13.3	2.3	1	23	1099	1122	1099	1122	0.96
16	17	0.29	43	5.7	3.2	2	23	1129	1150	1128	1150	0.96
17	17	0.16	24	6.5	2.2	1	23	1156	1178	1156	1178	0.96

Sequence Information

Coding Sequence: ATGAGTGAAGAAACTGAGactataatattttttgatgattattcagAGGGAAATATCGAGAATTCTGGGCAAACAGCTGAGAAAAGTGGAGTTTATACGGATGATGATAATGCAGAACATTTTGGTGATAAAGACGTGGAAAAGAGTGGGAAATGTttggaaaatctggaaaatgatGTTCAagATGCCCATCAGAACATGATGTACACCTACAAACAGCTGCCATCAGTCTCTTCGCCTTCGCCACCTCCAATAAAAGACCACAACTACAGCGAATCATCTCCCAGTACCTCAAAGCCCGAAAAACCCAGCCAGACCCAAGTAAAAACGATAAACGacttgaaaaaagtgattccCAAAGTGAAGTTCCTTCCCCCCGAAGTCGACACCTTAAAAGAGCTTTCAAAGTTCTCGCAGTCTTCaaaaaacccccaaaaatCGAAGCTCGACGATTATTGTCGCACATGTGCGGGTCTAAAAATCCCTTTAGTCGATATTTTCGGTGAAAAAGGCACTCAAATGCGTTTGATCCAGCAAATGAAGCACTTGGAGGACATCGACGAGCACGATGGCCTCTCCACCCAAATGTGCATGGACTGTATCTGCGATCTAAAAATGAGTTACAAGTTTTTCATGCAGATAAAGAAAGCGCAGATCAAGTTAAAGTCCTTGCTAACCGTCTCCACAAACGAGGAAAAGGCGCGCGCCTTTTCCGCACCGGAAAGTCCAAAGAAAAAGGCGGGAGATTCAATTTCCGCATCGACCCCACCCCCCCTCGCAGCTTTCGAACCCCCAGAAAGTGTTCCCGCCCCTGATTTCCCTCAGGAAACGATTCCCGAAGCTTTGGAGGAGCTCAGCGAGAGCGAATCCATCGAGGAATTCGATCCCGACGAtgcccccccttccccctccccttccgATAACGATGACCCCGAAAAAAAGACGGATGACCCTGAAAACTCCCCAAAACCCGAAGAACTTCCGCCGATTAGCGAAGAAACACCCGAACCCGTTGATCGATTTGACGCTTTGAGCGGTTTCGTGAAGATCAAGGCTGAAGATCATTCTTCGGAGAATCAGGAAGAGGCCGAAGACATGTCGGACTCTTCGAAATCTTCGGTATTAAAGCGAAAGGCCCCAGCCTCCCTAAGAGAGTCTTCAGACTCCCAAGAACTCCCAGAATCCGCGAAATCTCCGATAAAATCAGCGAAAGATCCGAAGATTCAGAAACTCGTGGCGAATCCTTTGAACATTTCTCCCTCGAACGAGGACGGGATAATGTATGTTACAGTAAAGGGGTCGAAACCGAACGAGCTTCTTCTTGTTAAGGTCAAGAAGATGgagaaaaacgacaaaaagGAGGAAGTTAAGCCGTTGATAAAGAAGCCTTTGGACTTGAAGCCTTTGAAGTCTGTGGAAAAGGCGCTGAAGTCTTTGCCGATGATCCTCAAGCATCCGGAACCGCCCAAGAAGATGGACTGCAGAGGCGCAATAATCGAACAGCAAATAGAGCAATACAAGAAGAAGCGGGAGCAGATTCTCGGAGGTTCGGTTGGACTCCCAAATGCCCTAAAATTTGAGGACGGAGCGGTAAGGTTCGTAAATCCGGTTCAGAGTCTCTCCGAAGACGACGCAAAACACGACCACTCAAGCGACGACTTCGACGACCAAAAACTGAAGATGGGATCAAGTatattttcaccttcaaacAAAGGTCAGATAAGTACAAAAGAATATTTAGCCAAGTTGTCGCGAATAAAGCAGAAatgggaggaagctaagaagaagaaggaagcACTTCAGCAGCAGCTTGACGAGTGCGGTGAAGGTAATACCGATAAATTGACTCGAATCCTAggggaaaaggagaagaacATCCAGGAGTTTCAGGAGTACCTAAAACAGCGGAAAATAGTGATAACGAAGTTAAAGGACGAGGACATTATCTCCCTGTACGAGGAGAGAAACGtgacgaaaaaatttccgGATCTGATTGACGAGAATATTCCATTTGACGGTTTGATAGACGCTGATTTTCTTGACTGCGACTACTGCATCCAGACGTTCTCATCTCGAGATGTTCTGGAAGAGCACTTGAAGTCTCACGACTACAAGATTTTCTACTTCTGCGAGGATTGCGGCCGTGAATTCACGACGAATAAAGCAAAACGTGGACACAATGTCACGTGTTTGAAGAAACTAGTCTGTAAATACTGCGACTTTATGCTAGAATCCAAAGGCAAAAAGCGCCAGCACGAGCAGAAGCATTGTGACGCAATGTACGGGCAATTATGCGATGTTTGTGGCGAGAAATTCAAGCACCAGGGAACACTGGACCAGCACATAAAAACGCAGCATATGAGTTGGGAGAAGATTTTCCAGTGTCCTAAGTGTCCTAAGAAGTTCGCATTCAAGCAGAAACTAAGTTTCCATTTGAAATCAGTTCATACGACGATGCGAGCTTATTTGTGCGAGGATTGCGGCGCTGATTTCAAGAATCCGGCGTCTTTGCGACACCACAGGATCAGGAAACATCAGCCTACTGGTAATAAGCGAGAGTGTCCAGTCTGCCACAAACTGGTGCCTTTCTACAGTTTATCGAAGCACATGTACACGCATAAAGCATACACGATCCAATGTCCGCACTGCGACAAGATGTTCAAAAACTCTTCGACTTTGAAGCAACATGTGCGGATTCATGAGGACCAAAGGCAGTATCGTTGCGACACTTGCGGCGTCGGTTTCAACAGGAGAGACGGCTTAAGACTCCATATGCGCGTCCATCAGAAGAGCGACAGCCGAGCCTTGAAGGAGTGCTCCTGCCAAATCTGCTCGGAAAAGTTCCCAAATCACTCGATGCTAGTCATCCACAGGAACCGGGTTCACAAGGACGGTAAACAGTACACATGCCACATCTGCAATAGGTCCATGCTCTCGACGAGATCCTTAGAATGGCACATGTCTCATATTCACAACGAGAGTGCCCCGGGACTCAACAAAGAGGACGCGGATAACTCGAGCGAGAAGAAGCGCGTCACGTGTAATCATTGTGACAAGACTTTCAAAACGGAGATGATTCTTAGGACCCATATCAAGAACACGCATATGGAGAAGAATCCGGTCAAGTGCTTGGACTGCGAGGCGACTTTTACGTCTGAGGTGAGACTCCGGCATCACATGATGGTGACGCACAACAGGCTGGAAGGAACACTGACCTGTCCCCATTGTCCAAAGAGGTTCGTCAATCAGCTTAGACTCAAGACACACATGATCTCGCATTCTGAGGACAGACCTTATACCTGCGAGATCTGTGGGTTCAATCTGAAGACGAAGATCCAGCTGATCAAGCATCATCAGAACAGGCACAGTGATGAGAGGCCGCTGCAGTGCAGGTACTGTCCTTGGAGGTGCAAGCAGGTCAGTGCACTGGTCTGCCATGAGAGGACGCACACCAATGAACGACCGTACACCTGCATTGTCTGCAAGCAGAGGTTCAAGTATCTGGGAGACAAGAACAAGCACGAGAGGAGGCACGAGAGTCTTGGGGGCCAGGGCTTCAAGAGGCTTGTCACCGGGAGACATGTCAAGGAGAAGGAGCGGGAGGAGGGCGAGACTTCGGAGGAGCAGGAACAGTATGAGGAGGTCGAGAGGGAGCTGGAGGAGCAGTATGAGGGAGTCGAGGAGTTTGATGCTACCGAGCAGATTGTCAAGTTTGAACCGCAGGAGATTGATGGAGAATACGAACAGGACTATCAGCAGgaatatgaAGAAACCTCGAGAGAAGCCTCGGAAGCTGCAGAAGTGATAATGCACATGGAAGATGCAACAGTATACACAGAAGAAGTGACTGCTGATAATATTGAAGCAGCAGAAATGATAACTGACGAGCTAATGACGAGTCAAATTCTTCAAGCTGGAACAGTTGTTCATCTTCAGCAGCAGGACGATGATGGTAAAATTCAGGTGATACCTGTTATGCTGTCTTTACCAGATCTAACTGATGCTGGAGGCGAGGTGAACCTTGCTACTGCATCAATCATGTATAGTAActga
Protein Sequence: MSEETETIIFFDDYSEGNIENSGQTAEKSGVYTDDDNAEHFGDKDVEKSGKCLENLENDVQDAHQNMMYTYKQLPSVSSPSPPPIKDHNYSESSPSTSKPEKPSQTQVKTINDLKKVIPKVKFLPPEVDTLKELSKFSQSSKNPQKSKLDDYCRTCAGLKIPLVDIFGEKGTQMRLIQQMKHLEDIDEHDGLSTQMCMDCICDLKMSYKFFMQIKKAQIKLKSLLTVSTNEEKARAFSAPESPKKKAGDSISASTPPPLAAFEPPESVPAPDFPQETIPEALEELSESESIEEFDPDDAPPSPSPSDNDDPEKKTDDPENSPKPEELPPISEETPEPVDRFDALSGFVKIKAEDHSSENQEEAEDMSDSSKSSVLKRKAPASLRESSDSQELPESAKSPIKSAKDPKIQKLVANPLNISPSNEDGIMYVTVKGSKPNELLLVKVKKMEKNDKKEEVKPLIKKPLDLKPLKSVEKALKSLPMILKHPEPPKKMDCRGAIIEQQIEQYKKKREQILGGSVGLPNALKFEDGAVRFVNPVQSLSEDDAKHDHSSDDFDDQKLKMGSSIFSPSNKGQISTKEYLAKLSRIKQKWEEAKKKKEALQQQLDECGEGNTDKLTRILGEKEKNIQEFQEYLKQRKIVITKLKDEDIISLYEERNVTKKFPDLIDENIPFDGLIDADFLDCDYCIQTFSSRDVLEEHLKSHDYKIFYFCEDCGREFTTNKAKRGHNVTCLKKLVCKYCDFMLESKGKKRQHEQKHCDAMYGQLCDVCGEKFKHQGTLDQHIKTQHMSWEKIFQCPKCPKKFAFKQKLSFHLKSVHTTMRAYLCEDCGADFKNPASLRHHRIRKHQPTGNKRECPVCHKLVPFYSLSKHMYTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKSDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGKQYTCHICNRSMLSTRSLEWHMSHIHNESAPGLNKEDADNSSEKKRVTCNHCDKTFKTEMILRTHIKNTHMEKNPVKCLDCEATFTSEVRLRHHMMVTHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYTCIVCKQRFKYLGDKNKHERRHESLGGQGFKRLVTGRHVKEKEREEGETSEEQEQYEEVERELEEQYEGVEEFDATEQIVKFEPQEIDGEYEQDYQQEYEETSREASEAAEVIMHMEDATVYTEEVTADNIEAAEMITDELMTSQILQAGTVVHLQQQDDDGKIQVIPVMLSLPDLTDAGGEVNLATASIMYSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00046443;
90% Identity: iTF_00046443;
80% Identity: -