Basic Information

Insect: Aleiodes leptofemur
Gene Symbol: -
Assembly: GCA_963942555.1
Location: OZ012622.1:606238-609304[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.064 9.5 7.7 0.0 1 23 358 380 358 380 0.92

2 12 1.1 1.6e+02 3.9 0.2 5 20 385 400 384 402 0.91

3 12 2.6e-06 0.00039 21.5 2.1 2 23 452 473 451 473 0.97

4 12 2.9e-05 0.0043 18.3 0.2 1 23 479 501 479 501 0.98

5 12 0.00025 0.038 15.3 2.4 1 23 507 529 507 529 0.98

6 12 5.8e-06 0.00087 20.4 1.0 1 23 535 557 535 557 0.98

7 12 0.0005 0.074 14.4 1.3 1 23 563 585 563 585 0.98

8 12 1.4e-07 2.2e-05 25.5 0.5 1 23 593 615 593 615 0.98

9 12 0.0048 0.71 11.3 0.2 1 23 621 643 621 643 0.94

10 12 7.6e-05 0.011 16.9 3.0 1 23 649 671 649 671 0.98

11 12 2.1e-05 0.0031 18.7 0.6 1 23 677 699 677 699 0.98

12 12 0.00094 0.14 13.5 2.1 1 23 705 728 705 728 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.064	9.5	7.7	0.0	1	23	358	380	358	380	0.92
2	12	1.1	1.6e+02	3.9	0.2	5	20	385	400	384	402	0.91
3	12	2.6e-06	0.00039	21.5	2.1	2	23	452	473	451	473	0.97
4	12	2.9e-05	0.0043	18.3	0.2	1	23	479	501	479	501	0.98
5	12	0.00025	0.038	15.3	2.4	1	23	507	529	507	529	0.98
6	12	5.8e-06	0.00087	20.4	1.0	1	23	535	557	535	557	0.98
7	12	0.0005	0.074	14.4	1.3	1	23	563	585	563	585	0.98
8	12	1.4e-07	2.2e-05	25.5	0.5	1	23	593	615	593	615	0.98
9	12	0.0048	0.71	11.3	0.2	1	23	621	643	621	643	0.94
10	12	7.6e-05	0.011	16.9	3.0	1	23	649	671	649	671	0.98
11	12	2.1e-05	0.0031	18.7	0.6	1	23	677	699	677	699	0.98
12	12	0.00094	0.14	13.5	2.1	1	23	705	728	705	728	0.94

Sequence Information

Coding Sequence: atgtCAGTggttaatgaattaatttatctatGTCGATTATGTGCAACGAAAACTGGAATATTATTGGGTTTACCAATATTCGATGTAGAAGGTGTGGAAAATCTCAGGaatatagataaaaaaatagccacaTGTTTACCAGTTCAGgTATCAATGACCGACGAACTCCCAAAAGTGGTTTGCGAAGAATGCGCCTTCAAATTAGACGAGATATTTGATTTTCGTGAGAAGTGTCTCGAAACTGAGCATCTTTTCATGGACATGCTCAAAAGAATGAAGGACAAGATGACTCATCCAGACGAAAGCTTCCACAATTCAGTGGATAAAATTCCGGAGATACAGAGAATTCATGACAATATAACTGATATTAATAGcgaaattgtaaataatatgaataatataGATAGTATAGAGGATTCCGAGTGTATTGATAAACCCGAGGATCTCGAGAATCCAACAATACACTCAGTTCAAGTAATTGAGGAGATGGATTCTGCTGACGAGGTGGTCGAACAGGTTGTTGGACAGGAAGACATAGAGCAACAAGAAGACATCGAAGTTACTTTTATTGACTGTTTAGACGGTGATACAGTCAGAATGGTGGACGAGCATATTCGGGAAGTGGCTGATCATCAAATTGCCATGCATTTAGACACTGATATAACCGTTGTAGGACATCTTGGGATGAATGACGTCACTGCTATTGGTTCGGAATCACCGAATATTGTACATTATTGCGATGATGACAAGTATGAGACTGTCCCAGAAAAGGAAGATCAATCAGAATACAATGAATTGCACAAAACATTGACGGTCGATTCTAGTACGAAGAGCATAACTCAGACTTTCGAGGAAATTCAGGAGGACAATGATAGGAATAGTATTGTTGAGGCTCCTTTAGCTGATAACATCATTAGCATTAAAGCGCAAGAAAATCCTGATGTTCCATCGACCAGTCGAAGTTCGATAAAAAATCGGGAGGAAGGAAAGGAGTACACGAAATACAAGAAGCATAGTTTACTGGAATCAACTTTAAACAATCCAACGATAGACGAAACAGGCACGAATTGGTACATTTGTTCGATCTGCAATGAAGCTGCCACGGAACCTAATAATCTAGCTGATCACTTCGATGAACACTTTGTCTCCTGTACTTGTGGcctattttttgttaatatcgATGATTTGAATGATCACAAGCAGTTTAATTGTAAGACTAAGGCGGTAAGCAAAAAAGAGCGGAGTAAGGATAAAAGTAAAATGCAAGAGCCACTGGATGAAGAAACTGCTTCATCAGTTAGCGaggataacaaaaaattacagaTAAATGGGAGACAAAAGTGGACACCCAAGGTTTGTTCGCAGTGTGGAAAACAGTACAGAACAAATTACAAACTTCAGGAACACATGAGAAAGCATACTGGTGAAAAGCCATTTCAATGTTTGCTGTGTGACAAAGCATTTAGGAGCAAAATTGGTCTGGCCCAGCATACTGCAACTCATACTGGACAGTTTGATTACAGCTGTTCGACTTGCGGCAAAGGTTTTCAATGTAAAAGTTATTTGATTGTTCATCAGAGGGTGCATTCGGATTTGAAACCATATCCCTGTGATACTTGTGGACAGAATTTTAAGACGAAGCAGTCGCTTTTGGATCATCAGAATAGGCATCTTGGGGTCAAGCCTTACATGTGCGAGGTTTGTGGGAGGGGATTCATAACTAAAGGCTTATGCAAGAGTCATCAAAAGATACATTCTGGTATGGACAATAGGCAGTATCCTTGCGAGGTGTGCAATAAGATGTTTGTGAGCAAAAGTTATTTGAATACGCATCTGCGGATTCATACTGGGGAAAAACCGTATTTGTGTGAGGTATGCGGAAAAGGCTTTTTGACGAGGGTCGATCTCAAAATTCACTCGACCATGCACACGGGCGAGAAAAGCTTCAAGTGCGAAATGTGTAATAAGGTTTTTGCGAGGAGAGCTGCACTAAGGTGTCATAGAAGATCACATACTGGCGAACGTCCTTATAGATGCGATGTTTGTGGCAAAACATTTACACAATTCAGCCCAATGGCTATACACAAACGATTACATACAGGCGAACGACCTTATCCATGCGATATTTGTGGTAAAGCCTTTGTTTCGAGGTCTACAATGATGTgtcataaaaagaaaaatcattcaacTACTGTTAATGGTAATAATACACAAACTGAGGAAGAAGCTGGAGCTGATAACGGAATTATCCGGGAAACAAGCGAAATTATGTCAAtcacgaattaa
Protein Sequence: MSVVNELIYLCRLCATKTGILLGLPIFDVEGVENLRNIDKKIATCLPVQVSMTDELPKVVCEECAFKLDEIFDFREKCLETEHLFMDMLKRMKDKMTHPDESFHNSVDKIPEIQRIHDNITDINSEIVNNMNNIDSIEDSECIDKPEDLENPTIHSVQVIEEMDSADEVVEQVVGQEDIEQQEDIEVTFIDCLDGDTVRMVDEHIREVADHQIAMHLDTDITVVGHLGMNDVTAIGSESPNIVHYCDDDKYETVPEKEDQSEYNELHKTLTVDSSTKSITQTFEEIQEDNDRNSIVEAPLADNIISIKAQENPDVPSTSRSSIKNREEGKEYTKYKKHSLLESTLNNPTIDETGTNWYICSICNEAATEPNNLADHFDEHFVSCTCGLFFVNIDDLNDHKQFNCKTKAVSKKERSKDKSKMQEPLDEETASSVSEDNKKLQINGRQKWTPKVCSQCGKQYRTNYKLQEHMRKHTGEKPFQCLLCDKAFRSKIGLAQHTATHTGQFDYSCSTCGKGFQCKSYLIVHQRVHSDLKPYPCDTCGQNFKTKQSLLDHQNRHLGVKPYMCEVCGRGFITKGLCKSHQKIHSGMDNRQYPCEVCNKMFVSKSYLNTHLRIHTGEKPYLCEVCGKGFLTRVDLKIHSTMHTGEKSFKCEMCNKVFARRAALRCHRRSHTGERPYRCDVCGKTFTQFSPMAIHKRLHTGERPYPCDICGKAFVSRSTMMCHKKKNHSTTVNGNNTQTEEEAGADNGIIRETSEIMSITN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00048138;
90% Identity: iTF_00046430;
80% Identity: -