Basic Information

Insect: Aldrichina grahami
Gene Symbol: -
Assembly: None
Location: Contig25:4023623-4025758[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.2 1.7e+02 2.5 0.2 3 15 95 107 94 110 0.82

2 8 0.0025 0.1 12.6 5.5 2 23 288 310 287 310 0.96

3 8 0.00055 0.023 14.7 1.3 1 23 316 338 316 338 0.98

4 8 0.0006 0.024 14.6 4.9 2 23 345 367 344 367 0.95

5 8 0.27 11 6.2 2.8 1 15 372 386 372 396 0.86

6 8 1.5e-05 0.00061 19.6 4.8 1 23 401 423 401 423 0.98

7 8 9.8e-05 0.004 17.1 2.6 1 23 429 451 429 451 0.99

8 8 1.1e-06 4.5e-05 23.2 5.2 1 23 457 480 457 480 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.2	1.7e+02	2.5	0.2	3	15	95	107	94	110	0.82
2	8	0.0025	0.1	12.6	5.5	2	23	288	310	287	310	0.96
3	8	0.00055	0.023	14.7	1.3	1	23	316	338	316	338	0.98
4	8	0.0006	0.024	14.6	4.9	2	23	345	367	344	367	0.95
5	8	0.27	11	6.2	2.8	1	15	372	386	372	396	0.86
6	8	1.5e-05	0.00061	19.6	4.8	1	23	401	423	401	423	0.98
7	8	9.8e-05	0.004	17.1	2.6	1	23	429	451	429	451	0.99
8	8	1.1e-06	4.5e-05	23.2	5.2	1	23	457	480	457	480	0.98

Sequence Information

Coding Sequence: ATGGCTTTTGATTTATGCATCGACAAGAACTTATTCCTAGACACTACATGTCGAACATGTAGTCGATTTTTTAGCGAGGATGTAAAGTTTTACAAAATATTTGAGGAGAAACTTAAGACAGCCACAAATGAGGATGCTGGTGCAGCGGATGGGTCCCTGCAAGCAGGTGACCTAAAAGAAAGCAAGGTGTATGAGACCTGCGAGGAGATCAAGGATATATTTGAGGATCTAAATATATGGAAATTGAATATCAAACCATTTGATGGTTTGCCTCAACAGTTGTGTGAGGAATGTTTTCAGCGTTTCAAACAGGTTAGAGCTTTTCGTGAAGAGTGCCTGGACAGTCAACGTATATTGCAGAGCTATTTCTTGGATTTTGATAATCTATTGGATGTTGGCAAACTATCACCCACTGCGGACTTGGTAAAATTGGAGTTTGAGAATCAGGAAGATACAGTTTTAGGCAAGGATTCAGCTAGATCTTCACCCAAGTGCTGCACACAAGAATTAATGTCACCTTTTAGCAGTCCCCGTTTGAGACTTAGTCCTCGTTTTGCCGAACTGGGTAATTGTCTCGATACTTCATCCTCTATGGGCACACCTCCTCCTTTATTCGAGGAAATCAAAACTGAACCCATAGATATGGAAACTATGGAGGTAATGAAGGCAGAATCTGAATTACCCTTTCAAGAACCCTTGAAAAAAGAATATACCATTAGATCTCCCAATAATTCATCGGATGAAGAATCCTCTACGCCTACCTCAGATGAGGAGGTAGAAACTGAAGACTCCTCCTCGTCGGATGAGGAGTCCTTGCAGGATTTCAAATTGAAACAAAAGAAAAAGTTGCACTCTTATTTGAAGTGTAAAATATGTGGCCAATCTTGTCAAAATCGCCAACAGCTCAAAATGCATCATATGCGTTTGCATCCCCAGGAGAAACCCTTCGAATGTGACATCTGCACCAGCACTTTCAAGTCAAGTTTTCTGTTGGCCCAACATAAGCTCAAGCACAATCGGCCCGATACCATGCAGTGTGATGAGTGCAAGAAATATTTCCGCAGCCAGCTACATTTGCAAAGGCATTTCAAGAATTTCCATTTAAAATCTACCTACACTTGTCACATTTGCAACCAACAATTCGAAAACTATACGCAAATGCGTTTTCAATATCATGTTCGACAGCATGGAGAAAAACGTTTCTCGTGTTCGTACTGTGACAAGGCTTTTCACCAAAAGATCCATTTGATCAATCATGAAAGGACTCACACAAAAGAACAGCCATTTCGTTGTGATTTATGCGGCAAGGCCTATCGCCAGCAGACTGCCTGTCAGGAGCACATGAAAACCCACAAGGATCCCACTCCCTTCAAATGTAAACATTGCTCCAAGGAGTTCTCTCAACGTTCTACGCTGCGAATACACATGCAGAAAATGCACAATTTGGAAAAACAATCAAACACTACTCAAAACTTTGCTAGAAATTCTGGGAATACGGCTGCAGTATTTGAGCAACATAATTTTATGAGTTTTTAA
Protein Sequence: MAFDLCIDKNLFLDTTCRTCSRFFSEDVKFYKIFEEKLKTATNEDAGAADGSLQAGDLKESKVYETCEEIKDIFEDLNIWKLNIKPFDGLPQQLCEECFQRFKQVRAFREECLDSQRILQSYFLDFDNLLDVGKLSPTADLVKLEFENQEDTVLGKDSARSSPKCCTQELMSPFSSPRLRLSPRFAELGNCLDTSSSMGTPPPLFEEIKTEPIDMETMEVMKAESELPFQEPLKKEYTIRSPNNSSDEESSTPTSDEEVETEDSSSSDEESLQDFKLKQKKKLHSYLKCKICGQSCQNRQQLKMHHMRLHPQEKPFECDICTSTFKSSFLLAQHKLKHNRPDTMQCDECKKYFRSQLHLQRHFKNFHLKSTYTCHICNQQFENYTQMRFQYHVRQHGEKRFSCSYCDKAFHQKIHLINHERTHTKEQPFRCDLCGKAYRQQTACQEHMKTHKDPTPFKCKHCSKEFSQRSTLRIHMQKMHNLEKQSNTTQNFARNSGNTAAVFEQHNFMSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00331875;
90% Identity: iTF_00259306; iTF_00200271; iTF_00260153; iTF_01174582; iTF_01177333; iTF_00921661; iTF_00922442; iTF_00350528; iTF_01261417; iTF_01194755; iTF_01259581;
80% Identity: -