Basic Information

Insect: Aldrichina grahami
Gene Symbol: zfh1
Assembly: None
Location: Contig1:8510736-8520354[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00013 0.0053 16.7 0.7 1 23 198 220 198 220 0.95

2 15 0.043 1.8 8.7 1.2 3 23 228 248 226 248 0.95

3 15 0.00023 0.0094 15.9 0.5 1 23 423 445 423 445 0.98

4 15 0.0016 0.064 13.3 0.4 1 23 451 473 451 473 0.98

5 15 4.7e-05 0.0019 18.1 3.7 1 23 505 527 505 527 0.97

6 15 0.011 0.45 10.6 0.3 1 23 549 571 549 571 0.94

7 15 0.0096 0.39 10.8 0.8 1 23 577 600 577 600 0.97

8 15 0.35 14 5.9 0.4 5 19 611 625 608 626 0.91

9 15 0.00021 0.0086 16.0 5.6 1 23 635 657 635 657 0.97

10 15 0.047 1.9 8.6 1.7 2 23 663 684 662 684 0.97

11 15 6.6e-05 0.0027 17.6 0.2 1 23 693 715 693 715 0.98

12 15 0.0062 0.25 11.4 0.2 3 23 723 743 721 743 0.97

13 15 7.5e-05 0.003 17.4 0.5 1 23 749 771 749 772 0.95

14 15 0.0082 0.33 11.0 0.0 1 23 782 804 782 804 0.97

15 15 0.018 0.73 9.9 0.0 1 20 1381 1400 1381 1403 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00013	0.0053	16.7	0.7	1	23	198	220	198	220	0.95
2	15	0.043	1.8	8.7	1.2	3	23	228	248	226	248	0.95
3	15	0.00023	0.0094	15.9	0.5	1	23	423	445	423	445	0.98
4	15	0.0016	0.064	13.3	0.4	1	23	451	473	451	473	0.98
5	15	4.7e-05	0.0019	18.1	3.7	1	23	505	527	505	527	0.97
6	15	0.011	0.45	10.6	0.3	1	23	549	571	549	571	0.94
7	15	0.0096	0.39	10.8	0.8	1	23	577	600	577	600	0.97
8	15	0.35	14	5.9	0.4	5	19	611	625	608	626	0.91
9	15	0.00021	0.0086	16.0	5.6	1	23	635	657	635	657	0.97
10	15	0.047	1.9	8.6	1.7	2	23	663	684	662	684	0.97
11	15	6.6e-05	0.0027	17.6	0.2	1	23	693	715	693	715	0.98
12	15	0.0062	0.25	11.4	0.2	3	23	723	743	721	743	0.97
13	15	7.5e-05	0.003	17.4	0.5	1	23	749	771	749	772	0.95
14	15	0.0082	0.33	11.0	0.0	1	23	782	804	782	804	0.97
15	15	0.018	0.73	9.9	0.0	1	20	1381	1400	1381	1403	0.93

Sequence Information

Coding Sequence: ATGGATAATCATGGCTATGGTGGCATACAGTGGATACAACACCACTCGAGTAATCACTCCTCCCATGCTGGAGATATGAAAACTGCTGGTCAGTTGATGATAGATCCTCAGCCGCCGCGTGCAGAGGATCTTATGGCCAGTGCCAATTCATCGTCGGACTATATGGCCACAGAGGATGAAGCCGATTCGGCAACTATAGCCCAAATTGCGGCTGAAAATCTAATTTTTATGGCTCGCGATGGTCAAATGATGACGGAAATAATAACAAATTCTACGACCGATGCAAATGGAACTGTGGTTGTGACAGCCAGCGACGGCGAACAGATTGACTGCGATGCCATTATGGAACAGGCTGCCTTAATACAACAGCACGAAGATGCTGGCGGTGGAGTTTATAGTGTTGAGCATTTTAGCGAGAATACACCGCAAATGGTGACGGAAGAGGTCATCACCGATGATTGGGTGCAACATCAAGGGGAAGAAAGAGTTGAAATACCCGCCGAACAAATTATTGGCTCCAGTTCCCAGGTGCTGCTGGACATTGAAGTGCCCCTGCCAACCGTACAAGATGAATACACTGCCCTGCGACCATACCCCTGTGACTTTTGTAGTCGACGATTTCGCAAAAAAGCCAGTCTAATGAATCATATGGTAGCTCATCAGACGGATCGGCCACATTTGTGTAAATTATGTGGAGCCAGATTTCTAAGGAGACAAGATCTCATAAATCATTTAAAAGGGCATGCAGAAGAGCCAACAGAACCACAAATGGATGATAGTGATTTCATACATTTTGTTACCGACACCACTTCCTCCTCACAACGTACTTCCAACGATCATTACTATGAACAGGATTGGAGTGTACCCGAAGATTCGGTAACCATACCAACAAAATCTAGTCGTAAACATCCACAACAACAGCAACATATTACCTCCATTTCTAATCAACAAATCATGATGGAAAATACTATAACCTCATCATCCCCCCAAGATGTGCTAACTACTACACAAACTACCACAGCACCGCCTAGAGGACGTATAAGTCGTCTCAAGCCTAAAGAGGACACCTCTTATGTGGTCGAAGTACCCAATAATTGTTCATCAGGTGAAATGATTATCTCCTCGGCTTATAGCATTGTAGAATGTGATACTTTGTCTGCCAATACGGCAGCCGTTAAACTTTCTCAGGACAATACACCCGCTCTGCATGAAAATGATGAAGAACATAATGTACTACACTATCCCGTTATAGATGATAGCAAACCATTTGTTTGTCAGCAATGTGGTTTGGCATTTTCCAGGGAAAAAGCCATGCTATCACATACCAAGACCCATCGTAATGATTCTCCCTTTGAGTGCCCCCAATGCAATGAATTGTTTTGGGATCAAAATAGTTTACAGGATCATCAAAAAACTCATCAGTTTGAAGAAAGCAATTCGGAATATGATCCCAATGAAGGCGAGGATGAAACACAAACCGAATCGGAGTCCGAACAACAGTTATATGGTGAATTTTATTGCAGTGAATGCGGCATGTCGTTTCATCGCCAGGATCTTTTGAAAAGGCATTCTAAAAGTCATCCCGCTGGTAATGTGACTATGGGTGGGCAATCAGCACAGAATGGCATAGAGAGTAGAGATCAACATTGTTGTAATACTTGTGGAGAAACATTTGCCGAGGCTTTAGATCTTTTAGCGCATGCCGAAATTCATGCACGTTACCCGCCCTTTAAATGTGTTTTATGCGGTGAATCTTTTTTCGAGGAAACCACCATCAAAAAACACCTGCAGTCCCAGCATCCCAATGAAATCACCGAGAACTCTTGCATATTGTGTGGCAAAGAGTGTCGTGATCGCAAAGCCTTAATGAAACATGCCTGGGATCATTCGCGAGAAAAATGCCACTCTTGCTCGAAATGTGGCAAAAATTTCCACAACAAGGCGCGCCTTAAACGCCATATGGCCTCACATCGCGACAAGTCTGTACAATGTGATGTATGTCACGAAGAATTTCCCGATGGTCGCACTCTATCCAATCACCGCCACTCGCACAGTGCCACTTCGGCGGGTAAACTATTTCCCTGTCTGGAATGCGGAAAAACTTTTGGCTCGCGGAGTTCCCAACAGATACATGTACGCATTCACACCGGTGAACGGCCCTATGGTTGTCGTTTCTGTTGGAAAGCATTTGCTGATGGTGGTACATTACGAAAGCATGAACGTATTCACACGGGAGAGAAGCCATATGCTTGTTCCGTGTGTCCGCGTGCCTTCAATCAGCGTGTTGTGTTGCGTGAGCATATACGTTCTCATCATTCGGGTTTGGATGCCAAAAGAGGCACCTATTATTGTACAGTCTGTGGTGCTGAGTTGTATTCGTCCGGAGATTTGATACAACATTTAATACAACACAGTGATATGAATACAGCTATGCAAAGGCAACCAGTGACTGGTCCTCGGAAATATAAACGTAGACGCAAATTGAAACCTCATGAACTGGCACGACTAAAACGTGAAGTCAAACATAATGGTGGCACTGGAAGCGACATTGATTTATCCGACTTTGATATAGACAATGTAGACGATTTGCTGGCAATGACAACCGACAGCAATACGGCCACAGAAACAGTAACAACGGCCCATGAACCGTCAGTCTCCCTACCAGGAAAGGCAACCAAACGAAAGAATGTCTCAGCCACCGTAAACACCGAAAGCAATAATACTAATAAGAGTAAAGCAACCATAAACAAAAATAACAAATCACACATTTTAGAAGATCAAGAAGATTTCGATTTAGATGTGGGTATTGATGATGATGAGCTTAAAAAACAACGTTACAACTCTACAAGTAGTGATAAAATTTGGCCCACAAAACAAACCGATGACACCTATAAATCCCTCTTATCAAATTTGGAGACAACTCTTCAAAGTATAGACACTTTAGTGGTGGGACCATCAACAAAATCCTCCCATACCATAGAAAATAACATGCTGGAAACACAGCAGCGTCAGACAAAGCGTAAAATTAAGCAAGAGTCCACCTCGACGGCTCAGAGAACACAACAGGTGCAACTAACAAGAGCAGACAAAGATCCATCTACTACCACAAACGGCAGAGGTCGTAAAAGTAAAACCGGCACCAAACAAACCAAAGGACCACAAATGATACATACAGAAAAATCAACTACAACCACAACTGACAATGGTGGCGGTTCAGCAACAGGCAAAAAGAAGTCTAAATCCATTATAACAAGAACACAAACCACAGCTATAGATTTACTGCCTAAAACTTCGGCCATAGTGGATGATTACGACATTATATCGCCCGCCTTGCAACCGCCCAAACAAATTAGCTCTAGTCCTTTGCATATAAAACAGGAACAAGATAATCACAAACACAACTATCACCACCATCCACAGCAGCATCATTTAATGAAAAATCCTCCAAATACTAATCACAGCACATCTGCCCGTACCCAGTCAACGACCCGCCACACAAACGCCACTGATCTCTACGATGCTCACTTATTGCTAGAGGCTTCGTGTCTGCGCAGCGAACTAGATGAGATTCTAAGATCACCCTCAAAGTCGTCGAACAAATCAAGGCAACGTTTTACCAGTGAATCTTCTACACAATTTTTAGCTGAGCAATCAGAAGAAGAACAACATTTGATAAAAATAGAACCCACATCGCCTGATCTAAGGGAAATTGTTAATGGTGCTAGTTCGGTTAATACTAGTGCAGCACAAGGAGACCTGGAATTGGAAGTTACCTCCAGTAAAAGTAGTAGATCTAAATCTTCCAGATCTCAAAGAGCGGTAAATTCAAATCGTAAATATTTAGAATTTACCGGTGATATAAGCCCTACTGAGACCTCTAACCTAAACAAAAGAGCCGCCTCATCACTCTCAACAAAGTCTTCAAAATCTGCCCGCACCGAACCAAACAAATCTGTGCAAAATTCAACTACTTCATATTTAGATTACACCATGGTGGATACATTTAATACGGTTACAAGTTCCTCGGCGAATAATAACAATTCATTTGCTTCTATCTCGGCAGTGGTTTCAGCAGCCGATGCTTCGGCAGCAGCCCAACAAAACTCCTCTGCAGCTGCTGTGCGTAAACCTCAACGGTATTTTGAATGTGAAATGTGCAGCGCCATATTTTCAGATCGTGCTCAACTATTGGATCATGTGCCCATACATATTTAA
Protein Sequence: MDNHGYGGIQWIQHHSSNHSSHAGDMKTAGQLMIDPQPPRAEDLMASANSSSDYMATEDEADSATIAQIAAENLIFMARDGQMMTEIITNSTTDANGTVVVTASDGEQIDCDAIMEQAALIQQHEDAGGGVYSVEHFSENTPQMVTEEVITDDWVQHQGEERVEIPAEQIIGSSSQVLLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQTDRPHLCKLCGARFLRRQDLINHLKGHAEEPTEPQMDDSDFIHFVTDTTSSSQRTSNDHYYEQDWSVPEDSVTIPTKSSRKHPQQQQHITSISNQQIMMENTITSSSPQDVLTTTQTTTAPPRGRISRLKPKEDTSYVVEVPNNCSSGEMIISSAYSIVECDTLSANTAAVKLSQDNTPALHENDEEHNVLHYPVIDDSKPFVCQQCGLAFSREKAMLSHTKTHRNDSPFECPQCNELFWDQNSLQDHQKTHQFEESNSEYDPNEGEDETQTESESEQQLYGEFYCSECGMSFHRQDLLKRHSKSHPAGNVTMGGQSAQNGIESRDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEETTIKKHLQSQHPNEITENSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAKRGTYYCTVCGAELYSSGDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHELARLKREVKHNGGTGSDIDLSDFDIDNVDDLLAMTTDSNTATETVTTAHEPSVSLPGKATKRKNVSATVNTESNNTNKSKATINKNNKSHILEDQEDFDLDVGIDDDELKKQRYNSTSSDKIWPTKQTDDTYKSLLSNLETTLQSIDTLVVGPSTKSSHTIENNMLETQQRQTKRKIKQESTSTAQRTQQVQLTRADKDPSTTTNGRGRKSKTGTKQTKGPQMIHTEKSTTTTTDNGGGSATGKKKSKSIITRTQTTAIDLLPKTSAIVDDYDIISPALQPPKQISSSPLHIKQEQDNHKHNYHHHPQQHHLMKNPPNTNHSTSARTQSTTRHTNATDLYDAHLLLEASCLRSELDEILRSPSKSSNKSRQRFTSESSTQFLAEQSEEEQHLIKIEPTSPDLREIVNGASSVNTSAAQGDLELEVTSSKSSRSKSSRSQRAVNSNRKYLEFTGDISPTETSNLNKRAASSLSTKSSKSARTEPNKSVQNSTTSYLDYTMVDTFNTVTSSSANNNNSFASISAVVSAADASAAAQQNSSAAAVRKPQRYFECEMCSAIFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259964;
90% Identity: iTF_00259964;
80% Identity: -