Basic Information

Insect: Aldrichina grahami
Gene Symbol: -
Assembly: None
Location: Contig155:781230-805450[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.5e-06 0.00031 20.6 1.3 1 23 610 632 610 632 0.97

2 18 0.00015 0.0059 16.5 0.5 1 23 638 660 638 660 0.97

3 18 6.5e-05 0.0026 17.6 0.6 1 23 666 688 666 688 0.98

4 18 4.8e-06 0.0002 21.2 3.0 1 23 694 716 694 716 0.97

5 18 6.4e-05 0.0026 17.6 4.7 1 23 722 744 722 744 0.99

6 18 0.00011 0.0046 16.9 5.6 1 23 750 772 750 772 0.97

7 18 5.5e-07 2.3e-05 24.1 4.3 1 23 778 800 778 800 0.98

8 18 2.1e-07 8.4e-06 25.5 2.4 1 23 806 828 806 828 0.97

9 18 0.00012 0.0049 16.8 6.7 1 23 834 856 834 856 0.97

10 18 0.0002 0.0081 16.1 6.6 1 23 862 884 862 884 0.98

11 18 1.9e-05 0.00076 19.3 4.5 1 23 890 912 890 912 0.98

12 18 7e-05 0.0028 17.5 8.3 1 23 918 940 918 940 0.98

13 18 3.5e-06 0.00014 21.6 7.7 1 23 946 968 946 968 0.98

14 18 1.2e-06 5e-05 23.0 7.7 1 23 974 996 974 996 0.98

15 18 0.00039 0.016 15.2 9.5 1 23 1002 1025 1002 1025 0.95

16 18 0.00032 0.013 15.4 0.5 1 23 1031 1053 1031 1053 0.97

17 18 0.00033 0.014 15.4 4.7 1 23 1063 1085 1063 1085 0.98

18 18 1.7e-05 0.0007 19.4 1.6 1 23 1091 1114 1091 1114 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.5e-06	0.00031	20.6	1.3	1	23	610	632	610	632	0.97
2	18	0.00015	0.0059	16.5	0.5	1	23	638	660	638	660	0.97
3	18	6.5e-05	0.0026	17.6	0.6	1	23	666	688	666	688	0.98
4	18	4.8e-06	0.0002	21.2	3.0	1	23	694	716	694	716	0.97
5	18	6.4e-05	0.0026	17.6	4.7	1	23	722	744	722	744	0.99
6	18	0.00011	0.0046	16.9	5.6	1	23	750	772	750	772	0.97
7	18	5.5e-07	2.3e-05	24.1	4.3	1	23	778	800	778	800	0.98
8	18	2.1e-07	8.4e-06	25.5	2.4	1	23	806	828	806	828	0.97
9	18	0.00012	0.0049	16.8	6.7	1	23	834	856	834	856	0.97
10	18	0.0002	0.0081	16.1	6.6	1	23	862	884	862	884	0.98
11	18	1.9e-05	0.00076	19.3	4.5	1	23	890	912	890	912	0.98
12	18	7e-05	0.0028	17.5	8.3	1	23	918	940	918	940	0.98
13	18	3.5e-06	0.00014	21.6	7.7	1	23	946	968	946	968	0.98
14	18	1.2e-06	5e-05	23.0	7.7	1	23	974	996	974	996	0.98
15	18	0.00039	0.016	15.2	9.5	1	23	1002	1025	1002	1025	0.95
16	18	0.00032	0.013	15.4	0.5	1	23	1031	1053	1031	1053	0.97
17	18	0.00033	0.014	15.4	4.7	1	23	1063	1085	1063	1085	0.98
18	18	1.7e-05	0.0007	19.4	1.6	1	23	1091	1114	1091	1114	0.96

Sequence Information

Coding Sequence: ATGAATACTGATAATGCAATTGCTAATGCAACAACTCCTGGTGAGTCAACAACAGCGGCAACAGCAGCAACATTATCAAATACAACTACCACAACTGTTTCAGCAGTTGCAACATCAAATGGCTATGATCCGCAGCAGCAACAAAATCGTCATTCGCCTTTGCAACAACAGCAACAACAACAACAACAGCAGCAACAACAATCCCAATTAAATGAGTCGCGACATATTTTAACTGTTGTCCAACAACCAAATCAAACATCTCCGCACTATATGTCAACGGCGAATGTTAATGGTAACCACAGTGGTACGACGGGAGGTGGTATTAACCACATCTCGACCACACCGATACCCTTAACAATGTCATCAACGACGAGAACAACACCATCAACAATTGTTGAGCAAAAACATATAGTAACCCATCAACCAACTATAACTTCCTCAAATCAGACAACAACAAGACCGTCTACTGGGGATGTGGCTTCTAGTTCAGTTGTTGTGCCCATGAGCACCACTTTAGTGTCTGCACATGATACACATTTGCTGCATCATCATCACCATCAGCATCATGTACATCATCATGTAAATCAAGCTGCAGGCTCGCCTATGTTGCTTAGTAGTGCTGGTCCTACAACTCCAACGCCTACAACGGGAACACTTTTAGCCAATAATTCACAAAATTTGGGTAAATATTGGGTTGTGACAAACTTGTTTCAAGGAGCCCCAGGTCAAGCGGCTCAATATAACGAGGCAGGTATAACGCACACACAAACATCTATAGCAGGAGTGCCTTCATCAACGTTAGTGCGTGCTATATCCACAACTGCCGGCAGCCCAACCGTAGTTACAAAAACAGAGGCAGTTTCTAGCAGTGCGGGAACGCTGCAAATACCACAAACCCAAATGTTATCTCAAGCGGGAATAGGACAACAACTGCCAAATGGCACCATTATAACAACCCAGGCACAGCAGCAACAACAACAGCAGCAGCAAAGACATGTAGCAGAACATCAGCAGCAGCAACAACAACAGCAGCAGCAACAGTTGCATGTTCATGCCTTAAATAATGCAGAGGATAATCGTCAGCAACAACAGCAGCAACAACAAATGAGCCAACAACAGCAACAACATGTTGCTGTTTTACAATCAAGTGATCAAGCCATAAAAGATGAAAAACCTTTCGCTTCCAATGGCAAAATAACTGCAACCAATCAACAGATCATTATGCAGCACATTTCAACTGCAGCATCCTCTGGCAGCCCGGCTACCTCTGGGGCCACTACCATAACACTGGGTGCACCCAAAACCGAAATTAAAGATGATGGTAGCGTAGTAATGAGCGGAAAATTACATCCTGGCATTGAAATGTATAAAGTAAATATCGAAGATATATCTCAACTATTTACCTATCATGAGGTTTTTGGTAAACTACACGGTGATGTTATGAATCATCCCTTGGCAGCAGCCCATGCATCCTTACCAGCTGCTGCAAATAATAATATTGCTGCAGCGGTTTCAGCCACTACCACAAGTGCGACTGAGGTTAATAATACAACTGGTGTAACTGTGGTAACCAATAGTGTCCCTATAACAGAATCCACCAGTACAAGTACTGTAGGTTCCGGTGGTGTGGTTGCTTCAACTAGTACAGCGGCTAACTTAACAACAGCCATTGCTACAAACGCCAATACTGCAGTAACTGCTACTGCAACGACTACAGGTGTGACTGCTGGTGGCTTGCTAATGCCGAAAATGGAAGGGGGTATTGCAAATGTAGACCAAAATACTGTTACTTTAGCGCCCGACGGCACTGTAGTGTCTACCGGTGAACATGTTTGCGACATATGCGGAAAAATGTTCGCCTTCCGCTATCAATTAATCGTTCATCGTCGTTACCACACTGAACGTAAACCTTTCAATTGTCAAGTCTGTGGTCAGGGCTTCTTTACCTCTCAGGATCTTACACGGCATGGCAAGATTCATATCGGTGGACCAATGTTTACTTGTTTGGTGTGTTTCAATGTTTTTGCCAACAATGCCTCTTTGGAGCGTCACATGAAGCGCCATTCGACGGACAAACCATTTGCCTGCACGATATGTCAGAAAACATTTGCCCGCAAAGAACATTTGGAAAATCATTTCCGTTCGCATACTGGTGAAACTCCATTCCGGTGTCAATATTGTGCTAAAACATTTACACGCAAAGAGCACATGGTAAATCATGTGCGTAAGCACACGGGAGAGACTCCGCATCGTTGCGAAATCTGTAAGAAATCATTTACGCGCAAGGAACACTATGTTAATCACTATATGTGGCACACTGGTCAAACACCTCATCAATGCGAAGTATGTGGTAAAAAGTATACACGTAAAGAACATTTAGCAAATCATATGCGTTCGCATACAAATGATACACCATTTCGTTGCGAAATTTGTGGCAAAAGTTTTAGTCGTAAAGAGCATTTTACTAATCACATATTATGGCATACAGGAGAAACTCCTCATCGCTGTGATTTCTGTTCGAAAACTTTTACACGTAAAGAACATTTATTAAATCATGTACGTCAACATACTGGGGAATCACCGCATCGTTGTACATACTGTATGAAAACGTTTACGCGAAAAGAACATTTAGTCAATCACATACGTCAACATACTGGCGAAACACCCTTTAAGTGCACTTATTGCACCAAAGCGTTCACGCGAAAAGATCACATGGTCAATCATGTGCGTCAGCATACCGGCGAATCGCCACACAAGTGTACGTTCTGTACGAAAACGTTTACACGCAAAGAGCACTTAACGAATCATGTGCGCCAGCATACTGGCGAGTCACCGCATCGTTGCAGCTATTGCAAAAAGACCTTTACACGGAAGGAGCATCTTACGAATCACATACGTTTGCACACAGGTGATTCGCCGCACAAGTGTGAATATTGTCAGAAAACCTTTACACGCAAGGAACATCTCAACAATCACATGCGTCAACATTCTAGTGATAATCCACATTGTTGCAATGTCTGCAATAAACCATTTACGCGCAAAGAACATTTGATAAATCACATGTCCCGCTGTCATACGGGTGATCGGCCATTTGCCTGTGAAACATGTGGAAAATCATTTCCGCTTAAGGGTAATTTACTCTTCCATCAACGTAGTCATACTAAGGGTCAAGAAATGGAGAGACCATTTACGTGCGAAAAATGTCCCAAAACATTTATTTGCAAAGGTCATTTGGTATCCCACATGCGCTCCCACTCCGGCGAGAAACCGCATGCTTGTACTTTATGCAGTAAAGCGTTTGTCGAAAGAGGAAATTTGAAGCGTCACATGAAAATGAATCACCCAAATGCTCCAATGCCACCACCCCCAGTGCCACATCCAGTTATCCCAGCAGGAGTTTTGCCTCAAATTAAACAGGAAATTAAACCAGTTATCAGTGAATTAAATCCTCTACAAACTTCAGCTCCAACCATGCATACAATACAACAAATAACAGCAGGAGCAGCGGCAAATACAGTGCAACTAACAACGGGTTTGACGCCTTTAGTAACGTCAACTATAACATCTCATGCTACACAAAAACAAGCGTCACAGCCTCAAGCTCAAGTGCAGCAACAACAATTGCAACAACAGCAGCAACAGCAAGTAGTAACAACACACCAACAACAGCAGCAACAACAACAGGTAACAGCACATCAACAAGTTTTACAACAGCAGCAGCAACAACAACACCAGCAAAATCAATTATTACAATTGTCTATACAGCAAGCAGCTGCGGCTGCAGCTCATCAGCAAATACAACAGCAGCAGCAACAACAGCAGCAGCAACAACAGCAGCAGCAGCAACAACAGCATCAAGAGCAACAACGCCAACATCATCATCAACAGCAGCAACAACAGCAAGCCCATCATCAACAACAGCAAACAGCTTCAAATGTTACTGTCGTTGCTGCAGCTCACCAACAGCAGCAACAACAACAACAGCAGCCATCTCAACAACAACAAACACAAACTCAACAGCAACCACCACAAGTGCCAATCGCTTTGATACAAACCGATCAGGAAGCTTTGGCCCGTGCCACAATGCAACAATTGCAACATATGCCCGCTAATGTTGAACAACATCCCGTTGTTTACTAA
Protein Sequence: MNTDNAIANATTPGESTTAATAATLSNTTTTTVSAVATSNGYDPQQQQNRHSPLQQQQQQQQQQQQQSQLNESRHILTVVQQPNQTSPHYMSTANVNGNHSGTTGGGINHISTTPIPLTMSSTTRTTPSTIVEQKHIVTHQPTITSSNQTTTRPSTGDVASSSVVVPMSTTLVSAHDTHLLHHHHHQHHVHHHVNQAAGSPMLLSSAGPTTPTPTTGTLLANNSQNLGKYWVVTNLFQGAPGQAAQYNEAGITHTQTSIAGVPSSTLVRAISTTAGSPTVVTKTEAVSSSAGTLQIPQTQMLSQAGIGQQLPNGTIITTQAQQQQQQQQQRHVAEHQQQQQQQQQQQLHVHALNNAEDNRQQQQQQQQMSQQQQQHVAVLQSSDQAIKDEKPFASNGKITATNQQIIMQHISTAASSGSPATSGATTITLGAPKTEIKDDGSVVMSGKLHPGIEMYKVNIEDISQLFTYHEVFGKLHGDVMNHPLAAAHASLPAAANNNIAAAVSATTTSATEVNNTTGVTVVTNSVPITESTSTSTVGSGGVVASTSTAANLTTAIATNANTAVTATATTTGVTAGGLLMPKMEGGIANVDQNTVTLAPDGTVVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFTCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQEIKPVISELNPLQTSAPTMHTIQQITAGAAANTVQLTTGLTPLVTSTITSHATQKQASQPQAQVQQQQLQQQQQQQVVTTHQQQQQQQQVTAHQQVLQQQQQQQHQQNQLLQLSIQQAAAAAAHQQIQQQQQQQQQQQQQQQQQQHQEQQRQHHHQQQQQQQAHHQQQQTASNVTVVAAAHQQQQQQQQQPSQQQQTQTQQQPPQVPIALIQTDQEALARATMQQLQHMPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236968;
90% Identity: iTF_00922262;
80% Identity: -