Arep003225.1
Basic Information
- Insect
- Alcis repandata
- Gene Symbol
- DMRT2
- Assembly
- GCA_949125135.1
- Location
- OX421223.1:11529397-11533018[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-26 2.2e-22 79.3 11.4 1 47 14 60 14 60 0.99 2 2 0.42 3e+03 -1.1 0.1 34 44 123 133 121 136 0.77
Sequence Information
- Coding Sequence
- ATGCCTAGTGAGGGTGGTGACGAAGGGCGGAAGGCGCTGCGGACGCCGAAGTGTGCGCGGTGCCGCAACCACGGCGTCATCTCGTGCCTGAAGGGACACAAGCGGCTGTGCCGGTGGCGCGACTGCCGCTGCCCGGGCTGCCTGCTGGTGCTGGAGAGGCAGCGAGTGATGGCTGCACAGGTAGCGCTCCGTAGACAGCAGGGCGCGGGCGGGGCGGAGGCCCGAGAcggcgaggcggcggcgctggcggccCGCAAGCGCGCCTACCGCGCGCGTCTTCGATGCATGCAGATGACCAGGGCCTATCCCGTGCCGCAGAACCTTTATGCTGGTGAAGAGCGTGTGTTCGGCGGCTACCGCGCGTGGTGCGAGCGTGTTCGTCGGCGGCGCGCGTTCGCAGACGCCGAGCTCGAGCGAACAttcgcgcccgcgccgccgctaccccccgcgcccgcgcccccgccccccgccgcGCTTCTCTGCAGGAACTTACTAGCCGCGCTCCTTACGACGTACGCTCCGCTGCCTGCTCAGCCGCAGAGACAGAAACTATCATTCTCTATCGAATCTATCATTGGGGTGCAGTAG
- Protein Sequence
- MPSEGGDEGRKALRTPKCARCRNHGVISCLKGHKRLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQGAGGAEARDGEAAALAARKRAYRARLRCMQMTRAYPVPQNLYAGEERVFGGYRAWCERVRRRRAFADAELERTFAPAPPLPPAPAPPPPAALLCRNLLAALLTTYAPLPAQPQRQKLSFSIESIIGVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01335980;
- 90% Identity
- iTF_00827014;
- 80% Identity
- -