Arep008302.1
Basic Information
- Insect
- Alcis repandata
- Gene Symbol
- V-REL
- Assembly
- GCA_949125135.1
- Location
- OX421228.1:12108496-12117212[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-34 1.4e-30 107.1 0.0 2 167 44 217 43 219 0.94 2 2 3.2 1.2e+04 -3.2 0.0 79 100 248 269 234 273 0.76
Sequence Information
- Coding Sequence
- ATGAGTGCAGTTGTAGATATTATTAATGTTATATTACTGTTGCTACTATTGCTAGAGCTGCTGTCGGCACCACCGGTAGAAGAATTTCCACAGCAGCCGCCACTACAGCCGCCACCACAGTCTTGTGTAATTATACTCGAGCAGCCGTATCGCAGAACCCGATTTAGATATACTCACGAGTTGAGAAACAGAATCATAGGTTCGATCCGAGGCTTTCACTCCACAGAGGCGAGTCAGTCCTTTCCAAGAATCAGGATAATCCACAACGACTTGCAAAACGCCATTGTTGTCGTGTCTTGCGTCACCAAAGACGCACCTCACAGGGTGCATCCGCATGGATTGTTCGGCCCCGGCACCAAAGACGGTGTGCTTGTGACCAGTCTTACTGCACCAGCCAATGAATTACAGTTTGAAGGGCTCGGAATCCATCGCGCCACAATTACTGGGAAACATCAAGCGCTGCAGATGCGTTCCACATTAGGTGTACCGGGTTTCACTACAGTAATCGATCCCTTCGGATATGGATTTCACCACGCCGATGATTTAAACAATAACGACATGCGCTCAGTGCGGCTCGCGTTTCAAGTGTTCGTACAGAACAGGTGGCAGTATTGGGAGACGCTGGATCCTATCGTGTCCTATCCTATCATCTACAACGAAAACGTTCCTACCGATTTGCTGGAAATAAACTACGTCTCAAAACAGTCAGGCTCGTTTGCAGGCGACGACTCACTCGCTATAGTGTTTGATCAGAGGGTGGACCAAAACAACATGGAGGTGGTGTTCTATGAGCTTGGTGCTGAACATCAATTTAGGTGGCGGAGCATAGGATCTATCGAGCATGTGCACGTAGCGTGTGTAATACTCAGAACACCGCCGTGTGGCAGGACCTCAGACGACATCGTAACCGCATATTTCCAAGCACGGAGGCTGTCCGACAATCAAGTCAGCACACCGCTTGAGTTCCAATACCTACCAAGCTCAAGACTAGCTCTGCCTCCGCAAGCCGAAGATCAAGAGCTGCAAGAACCCAGAAACCGAACCAGGTTCCGCCCGATGCCGGTAATTAGGGACCCGAGACTGAACCAAGAGGCTGCTTCTTCCTCCGACGAGGGCGAGGATAAGTCGGTTGACTCCAGCGATGATGAGTTGTACGACAGCGACTTCTCTGATAAGGATGAGCCAGAGGACTCTTTTGACACGGATGAGCCAGATAATTCTATCGAGTCCATCTTGGAATCGATCGCGCTGCTCTTTATCTAA
- Protein Sequence
- MSAVVDIINVILLLLLLLELLSAPPVEEFPQQPPLQPPPQSCVIILEQPYRRTRFRYTHELRNRIIGSIRGFHSTEASQSFPRIRIIHNDLQNAIVVVSCVTKDAPHRVHPHGLFGPGTKDGVLVTSLTAPANELQFEGLGIHRATITGKHQALQMRSTLGVPGFTTVIDPFGYGFHHADDLNNNDMRSVRLAFQVFVQNRWQYWETLDPIVSYPIIYNENVPTDLLEINYVSKQSGSFAGDDSLAIVFDQRVDQNNMEVVFYELGAEHQFRWRSIGSIEHVHVACVILRTPPCGRTSDDIVTAYFQARRLSDNQVSTPLEFQYLPSSRLALPPQAEDQELQEPRNRTRFRPMPVIRDPRLNQEAASSSDEGEDKSVDSSDDELYDSDFSDKDEPEDSFDTDEPDNSIESILESIALLFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -