Basic Information

Insect: Agrotis segetum
Gene Symbol: -
Assembly: GCA_036375495.1
Location: JAQSVV010000013.1:2925116-2963258[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0018 0.17 13.4 0.0 1 23 519 542 519 542 0.95

2 17 0.046 4.2 9.0 3.8 2 23 683 704 682 704 0.95

3 17 1 90 4.8 0.7 1 23 716 740 716 740 0.91

4 17 0.00017 0.015 16.6 0.3 2 23 747 770 746 770 0.97

5 17 1.2 1.1e+02 4.5 0.6 1 23 776 798 776 798 0.94

6 17 0.0044 0.4 12.2 2.9 1 23 804 826 804 826 0.98

7 17 4.6 4.2e+02 2.7 0.8 2 15 837 850 836 853 0.85

8 17 4 3.6e+02 2.9 0.4 2 15 864 877 863 880 0.86

9 17 0.058 5.2 8.7 0.2 1 23 1010 1032 1010 1032 0.97

10 17 2.7 2.4e+02 3.4 7.2 1 23 1039 1061 1039 1061 0.95

11 17 0.0018 0.16 13.4 1.8 1 23 1103 1126 1103 1126 0.95

12 17 0.0024 0.22 13.0 1.0 1 23 1133 1156 1133 1156 0.98

13 17 0.0074 0.67 11.5 0.2 2 23 1178 1200 1177 1200 0.96

14 17 0.0039 0.35 12.4 5.1 3 23 1226 1247 1225 1247 0.95

15 17 0.00032 0.029 15.8 1.8 1 23 1272 1294 1272 1294 0.97

16 17 0.00016 0.014 16.7 0.1 1 23 1300 1322 1300 1322 0.97

17 17 0.0005 0.045 15.2 0.7 3 23 1330 1351 1328 1351 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0018	0.17	13.4	0.0	1	23	519	542	519	542	0.95
2	17	0.046	4.2	9.0	3.8	2	23	683	704	682	704	0.95
3	17	1	90	4.8	0.7	1	23	716	740	716	740	0.91
4	17	0.00017	0.015	16.6	0.3	2	23	747	770	746	770	0.97
5	17	1.2	1.1e+02	4.5	0.6	1	23	776	798	776	798	0.94
6	17	0.0044	0.4	12.2	2.9	1	23	804	826	804	826	0.98
7	17	4.6	4.2e+02	2.7	0.8	2	15	837	850	836	853	0.85
8	17	4	3.6e+02	2.9	0.4	2	15	864	877	863	880	0.86
9	17	0.058	5.2	8.7	0.2	1	23	1010	1032	1010	1032	0.97
10	17	2.7	2.4e+02	3.4	7.2	1	23	1039	1061	1039	1061	0.95
11	17	0.0018	0.16	13.4	1.8	1	23	1103	1126	1103	1126	0.95
12	17	0.0024	0.22	13.0	1.0	1	23	1133	1156	1133	1156	0.98
13	17	0.0074	0.67	11.5	0.2	2	23	1178	1200	1177	1200	0.96
14	17	0.0039	0.35	12.4	5.1	3	23	1226	1247	1225	1247	0.95
15	17	0.00032	0.029	15.8	1.8	1	23	1272	1294	1272	1294	0.97
16	17	0.00016	0.014	16.7	0.1	1	23	1300	1322	1300	1322	0.97
17	17	0.0005	0.045	15.2	0.7	3	23	1330	1351	1328	1351	0.95

Sequence Information

Coding Sequence: ATGACGGAATCGCAAGCACCTTTGATCCTATGCATGGAGAACGCGACCGGCGAAGAGGTTGCGCTCAGAATAGAACCTGATGATAACTTCCAGATGTTTCTCGATAAGTCCAGAACCCTCCTAGGTTACGACGTAGACATAAACTCTATAACCAGAAACCAACCGGTCTCACTATCAGAAAACGTCTGCCAATTCCTTATCAACGCCGAACAAAATCTGCAAGCAGATGATCTAACACACAACTTTGATCAAATGTTGGACACCAACGATGGAACTAACGATTTGGTCTACATCTTGGACGATGGCACGCAAATACGAGCTTCTCAAATACATTTTGATAATGATGATCCTTTGGTAGACCTTACAGCAGAAACAATACCGTTTGTCAAATACGCAGATGATATAACAGATGTGTACTTTGATAACGTTCAAGTCCAAGAAActaaaaagattaatatttgTGAAAGCCCCGTGTCTAGATGGTCCAGTAAAAATTCTAGCCCCAGATGCAGTTTTGTCAACTCCTTACCGTTTAAATTGGTATGCAATAACACGTCCGGTTTCGAAGCTCAATTCACGAAATATTTAGAAACAAATAATACTAAAACTTACGCGACTTTGAACCCAGTTACGACGAGGAATAAATCTCCAAAGAGTTTGATTAAAGATAACTTTAAGAACTACGACGATAATTATCAGAGGAATGATAACTTTTCTTACACTCGAGAGGAGATATTGAACATGTTTAAAGACTCCCCGATGACATCTTTGCCTTATGACCAGGGTTACAGCGAAAGGAGACATGTACGGAAAACTGACCCTTCGAGACTTGTGCATAAGAACTGGAACAAACCACTTTCCTATATCGATATTGATGGAGTTTTAATCGGGGAAAGTGAGAGCCAAATCTGTTTTATTTGCGGGAAACATGTTGATAATAACGTAGACAAACTGTACCTTTTTGACAATGAAGATCAGAGGTTGCACAGGTGTTCACCGCAAAAGAAAATGTCTACGCAGTTGAAAATTATCTGCGAATGCTGTCTTAACGAAAATTTCGCGCCATGCCGGATGAAAGGCGCCAACCAATTTCTAAATCCTGATGAATTCCTGGTCATAAGAAATAATCAGCAATACATCTTCCAGAAGGTGAAAAACTTCAATTTTACGCATTTGAGCAAACCCATAGAGACCCCGAGCAAGACAGAGAAAAAAATAGAGAAAGAGGAGTTTGTGAAAGTCGAAATAGGTTCCGATGGAGAAATTATCACGAAACCGTATAGACctaaagacattattattataaaagatgaGAAAAAGGACGGTAGTTCTAGTGACGTGGAGATTATAGAGCCCGAACCAGAGATAGATAATATCATAGACAATTTAGAAGAGGCTGATGAGGAAGTGAAGGAGTTTTTGGGGAAATATCAAGtcgatgatagtgaagttactGAGTTAAAGTGCAGATTCTGCGAGCAAATCTTCCCGGATCTCGTCGTAGTAGCCGATCATTGTGAGACCCACAAACATGACTTGGAAGACGGCGAAGTATATCCATGCCCACTGTGCAATTACGGTTATGCAAATTTGAAGTGGCTGAAAGCCCACGTTAAGGCGGCACACGAGAAGACTGAAGCCCAAAAAGTATtaaaagaggaaaaaatattaaaagaggaAAACATATCAAAAGAGGAAAACGAACCTCCTAAAGTGGAGAATAAAGatGATAAAGAGACTCCTACTAAAGCTTCATCACCTATTGCTACACGAACTAGAAGTTCTAGTAAAAAAGATAGTGATGGTGATAAAAAAGAGCATGAAAAGTCAGATGAAATAAAGGCCGATTCAAAACCTGAGACGAAAGAGCCACCCATCATAAAAACGGAGGTAAAGCAAGAATGTCTGGACAGCAGCGAGGATGAGATCTGGATAGTCCAGACTGGTGATGATGCGGCCACTCAGGAGTTGCAGAAACTACTGTGCAGTGCTAAGTTTCCGCGAAAGCGTCGCTACCGGGAACCGAACTCCAACCCTCAGGTGGTGACCTGCCACAACTGCAACGAGTCCTTCACGTCCAAAGTTAGACTCAAGTTTCATATGCAATTCCACGAATCTTCAAACCAAACCCGTACAGACGGTCGGTACTCTTGCTCGGAATGCGACGACGCTACCTTCGCGACTGAGACCGAACTGTTCGACCACGTGCATTTCCAACATGATAAGCAGAAGAGGTGGCAGTGTCCCGTCGAGGGCTGCGGGAAGACGTTCTTCTTAAGGGCAACACTTACAAAACATAGTCGAACGCACACAGACACGCGTCGCTATGTGTGTATCACGTGTGATAAACGATTCTTGGATAAGCAGACGTTGGATGAGCATAGAGTTACGCATTTACAGATCAAACCTTTCCAATGCCACATATGCTTGAAGCAGCTGACCCGTCGGTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGCCTCGTGTGCGTGTGTGCCGTCTGCACGAGGGCCTTCAGAGATCATCGGCATGCACAGCACGAGGAGGAGCTGGCGCCGCGCCTCGTGTGCGTGTGTGCCGTCTGCACGAGGGCCTTCAGAGATCATCGGCATGCACAGGTTAGTTGTGCATCCAGCACGAGGAGGAGCTGGCGCCGCGCCTCGTGTGCGTGTGTGCCGTCTGCACGAGGGCCTTCAGAGATCATCGGCATGCACAGGTTAGTTGTGCATCCAGCACGAGGAGGAGCTGGCGCCGCACAAGAGCATGCAACGAAATCAACGGAATGTATCGAAGCGTTTACAAGCGAGTTGAAGGAGGAGGAGGAAGAGGTGTCGGTGGAGTTGTCTCCTACCAGTGGACTTGTGAGACAGGCTGTGCAGATTGTTGAATCTCCGAAACTATCAAAGCCAATAAAGCGTCAGGTGTCAGCGTCCGAAGCGTCTCCCCTGCTGTCTCAGCTGGCTGATGAAGCGCGCGCACTCATTAGGGTCGTTGAGATCGAGAAGGCTTTCAGATGCGAATACTGCGAGGATGTATTCTACTTGGAGAGCGGTCTCAACAGTCACCGTGCGATACACAAAGGTGTTAAAAATCCCTTCACCTGTCACATCTGTAAAGTTAGCTTCGCGACTTATTCCAGATGTACAACTCACAAAACGACACACGGCTTCTACAAGCGCTCCCTAGCGGAGGCCACGAAGCAAGCGGACGGTCGCGCACACACTCAGGACTCAACCCGCTCCGCTACTGGGATACTGGGATATGGAGACTTCCCTGTAGTCAAACACTTCCTGTGTGAGGACTGTGGCCGTTCCTACTTACACTGGACGTATCTACAAGTACATCGACGTATGAAACACGCGAATGAAAATTTTCTATACAAATGCAACCAGTGCGAACTTACCTTTCCTAACAGttGGAGCATGGCATATCACCGTAAGAAATTGCACGGTAAGACGGGAGCCGAGGACTCTGGGACTGGCAAACAAAATACCAGGGAAGATTACAGGATACCATGTCGGGATTGCAACGAGGTGTTGCCGAACAAAACAGCGCTATACAAACATCGGAAGAAGGAACATAGCGACGGAACTACAAGAGCATATACTAAACCAGGCATGTATGCGAGTGCAGAGGCTAAATCTACAGGCGGCGCATGTCCACATTGTCACGCTACATTCACGCACGCCACGGACCTGCACAAACATGTCAAAGAGGTTCACGGCAGTATCGAGAACTCATGTCAATCGTGCAACACGTCCTCAACGACGGTGGGGACGTGTCCCCGTCGTCCTCACTCGTGTCCGGTGTGCGGGCACGCCTTCCGCACGCTGTCAATGAGGAACGAACATCTGAGGGTGCACACTGGGGAGAGACCGTTCCCTTGTGATGTTTGTGGAGTCGCTTTTAGGAGGTCCACTGCGATGCGCAACCACCGTCTCATCCACACCGGAGTCCGCGCGTGGGCGTGTGGACGATGTCCTAAGAGATTCCGTATCCGGTCCGACCTCCGGACACATCTGAGACTCAAACACCCCGCTACCATTGTAGTTGTTGAGatggAAGGTCTGAATCCCACGTCTGAAGAGGTAATGAAGACGCTTGCTGTTCAAAACGTTCCACACGACAAGCTTATAGATATCACCAAGATATCCTTTAGAAAGGGTACTACGAGTGTGATCCCGTCGTGCGCGCGCGCACTGTCCGTGCTCAACAACGTGCCGCGCACACATGTCGCCTGTATCAAGCCAGAGCCCACACGATGGAAGACTTCCAACCAGCTCGACGTGGTCGAGGCATCGCTAAGAACCCCAGACGACCCAAGATATTACAGCAAGGAGAATCTGATATACAGGACAATACTGCCTACCCCATTGTTGGAAGAGAGGTGA
Protein Sequence: MTESQAPLILCMENATGEEVALRIEPDDNFQMFLDKSRTLLGYDVDINSITRNQPVSLSENVCQFLINAEQNLQADDLTHNFDQMLDTNDGTNDLVYILDDGTQIRASQIHFDNDDPLVDLTAETIPFVKYADDITDVYFDNVQVQETKKINICESPVSRWSSKNSSPRCSFVNSLPFKLVCNNTSGFEAQFTKYLETNNTKTYATLNPVTTRNKSPKSLIKDNFKNYDDNYQRNDNFSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKNWNKPLSYIDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFAPCRMKGANQFLNPDEFLVIRNNQQYIFQKVKNFNFTHLSKPIETPSKTEKKIEKEEFVKVEIGSDGEIITKPYRPKDIIIIKDEKKDGSSSDVEIIEPEPEIDNIIDNLEEADEEVKEFLGKYQVDDSEVTELKCRFCEQIFPDLVVVADHCETHKHDLEDGEVYPCPLCNYGYANLKWLKAHVKAAHEKTEAQKVLKEEKILKEENISKEENEPPKVENKDDKETPTKASSPIATRTRSSSKKDSDGDKKEHEKSDEIKADSKPETKEPPIIKTEVKQECLDSSEDEIWIVQTGDDAATQELQKLLCSAKFPRKRRYREPNSNPQVVTCHNCNESFTSKVRLKFHMQFHESSNQTRTDGRYSCSECDDATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCITCDKRFLDKQTLDEHRVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVCVCAVCTRAFRDHRHAQHEEELAPRLVCVCAVCTRAFRDHRHAQVSCASSTRRSWRRASCACVPSARGPSEIIGMHRLVVHPARGGAGAAQEHATKSTECIEAFTSELKEEEEEVSVELSPTSGLVRQAVQIVESPKLSKPIKRQVSASEASPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLAEATKQADGRAHTQDSTRSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSMAYHRKKLHGKTGAEDSGTGKQNTREDYRIPCRDCNEVLPNKTALYKHRKKEHSDGTTRAYTKPGMYASAEAKSTGGACPHCHATFTHATDLHKHVKEVHGSIENSCQSCNTSSTTVGTCPRRPHSCPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPTSEEVMKTLAVQNVPHDKLIDITKISFRKGTTSVIPSCARALSVLNNVPRTHVACIKPEPTRWKTSNQLDVVEASLRTPDDPRYYSKENLIYRTILPTPLLEER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00043044; iTF_01084551; iTF_01085797;
90% Identity: -
80% Identity: -