Aput017413.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrotis puta
Gene Symbol
GVQW3
Assembly
GCA_943137145.2
Location
CALPBO020000983.1:200733-235017[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 1.8 1.2e+02 3.7 0.4 2 23 488 509 487 509 0.86
2 13 0.0014 0.093 13.5 0.0 1 23 519 542 519 542 0.95
3 13 0.044 2.9 8.8 2.1 2 21 667 686 667 687 0.94
4 13 0.035 2.3 9.1 3.8 2 23 750 771 749 771 0.95
5 13 0.76 51 4.9 0.7 1 23 783 807 783 807 0.91
6 13 0.00013 0.0086 16.8 0.3 2 23 814 837 813 837 0.97
7 13 3.3 2.2e+02 2.9 0.3 1 23 843 865 843 865 0.90
8 13 0.0033 0.22 12.3 2.9 1 23 871 893 871 893 0.98
9 13 0.83 56 4.8 1.8 2 19 904 921 903 924 0.90
10 13 0.044 2.9 8.8 0.2 1 23 1003 1025 1003 1025 0.97
11 13 2 1.4e+02 3.5 7.2 1 23 1032 1054 1032 1054 0.95
12 13 0.0014 0.091 13.5 1.8 1 23 1092 1115 1092 1115 0.95
13 13 0.0016 0.11 13.3 0.8 1 23 1122 1145 1122 1145 0.98

Sequence Information

Coding Sequence
ATGACGGAAACGCAAGCACCTTTAATCTTGTGCATGGAGAACGCGACCGGCGAAGAGGTGGCACTCAGGATAGAACCTGATGATAACTTCCAGATGTTTCTCGATAAGTCCAGAACCCTCCTAGGTTACGACGTAGACATAAACTCGATAACCAGAAACCAACCGGTCTCACTATCAGAAAATGTCTACCAATTCCTTATCAACGCCGAACAAAATCTGCAAGCAGATGACCTAACACACAACTTTGATCAAATGTTGGACACCAACGATGGAGCCAACGATTTGGTCTACATCTTGGACGATGGCACACAAATACGAGCTTCTCAAATACATTTTGATAATGATGATCCATTGGTAGACCTTACAGCAGAAACAATACCGTTTGTCAAATACGCAGATGACATAACAGATGTATTCTTTGACAACGTTCAAGTCCAAGAAACTAAAAAGATTAATATTTGTGAAAGCCCCGTGTCTAGATGGTCCAGTAAAAATTCTAGTCCCAAATGCAGTTTTATCAATTCCTTACCGTTCAAATTGGTATGCAATAACACGTCCGGTTTCGAAGCTCAATTCACGAAATATTTAGAAACTAACAATACTAAAACTTACGCGACTTTGAACCCAGTTACGACGAGGAATAAGTCTCCAAAAAGTTTGATTAAAGATAACTTTAAGAACTACGACGATAATTATCAGAGGAATGATAACTTTTCTTATACTCGAGAGGAGATATTGAACATGTTTAAAGACTCCCCGATGACATCTTTGCCTTATGACCAGGGTTACAGCGAAAGGAGACATGTACGGAAAACTGACCCTTCAAGACTTGTTCATAAGAACTGGAGCAAACCACTTTCCTATGTCGATATTGATGGAGTTTTAATCGGGGAAAGTGAGAGCCAAATATGTTTCATTTGCGGCAAACATGTGGATAATAACGTTGACAAACTGTACCTTTTTGACAATGAAGATCAGAGGTTGCATAGGTGTTCTCCGCAAAAGAAAATGTCTACACAGTTGAAAATTATCTGCGAATGCTGTCTTAACGAAAATTTCACGCCATGCCGAATGAAAAGCGCCAACCAATTCCTAAATCCTGATGAATTCCTGGTCATAAGAAATAATCAGCAATACATCTTCCAGAAGGTGACAAACTTCAGTTTTACGCATTTTGGCAAACCCATAGAGACCACGAGCAAGACAGAGAAAAAAATAGACAAAGAGGAGTTTGTGAAAGTCGAAATAGGTCCTGATGGAGAAATTATCACGAAACCTTATAGATCTGATGACATTATTATTATGAAAGATGAGCAAAAGGACGGTAGTTCTAGTGATGTGGAGATTATAGAACCTGAACCAGAGATAGATAATATCATAGACAATTTGGAGGAGGATGATGAGGAAGTGAAAGAGTTTTTGGGGAAATATCAAGTTGACGATAGTGAAGTTACTGAATTGAAGTGCAGATTCTGCGAGAAAATCTTCCCGGATCTCGCGGCAGTGGCAGATCATTGTGAGACCCATAAACATGACTTGGAAGATGGCGAAGTATATCCATGTCCACTTTGCAATTATGGTTATGCAAATTTAAAATGGCTGAAGGCCCATGTAAAGGCGGCACACGAGAAGACTGAAGCCCAAAAAGTATTAAAAGAGGAAAACGAGCCTCCTAAAGAGGAGAATAAAGATGGTGAAGAAACGCCTATTAAAGCTTCATCACCTATTGCTACACGAACTAGAAGTTCTAGTAAAAAAGATGATGGTGATAAAAAAGATAATGAAAAGTCAGATGAAATAAAGGCTGATTCTAACACCGAGACGAAAGAGCCACCCATCATAAAAACGGAGGTAAAGCAAGAATGTGTGGAAAGCAGCGAGGATGAGATCTGGATCGTTCAGACTGTTGATGATGACGCCACTCAGGAGCTGCAGAAACTACTGTGTGGTGCTAAGGTAAAAGAAGACCGGCAAGATGGAGAATCTGAAAAGACACCCAAATGTAGTAATTGCAGTCAAGTATTCGGGAACCGAGAAGATCTGTCAAACCATCGCTGTAGAAAACGAAACCGGAAGCGGAAGTCCAAAGACCTGGGGAACCTCATATGTATACCTACGGAGGAAGACTTCTTAAAGAGAGCTCAAGGGCGTCCACGACCACCTGAAACATCTATAGACAATGATCTTCTAGTTATGTTTCCCCGAAAGCGCCGCAATCGGGAACCGACCTCCAACCCACAAGTGGTGACCTGCCACAACTGTAACGAGTCCTTCACGTCCAAAGTTAGACTCAAGTTTCATATGCAGTTTCACGAATCATCAAGCCAAGCCCGAACAGACGGTCGGTACTCTTGCTCGGAATGCGACGACGCGACCTTCGCCACGGAGACCGAACTGTTTGACCACGTGCACTTCCAACATGATAAACAGAAGAGGTGGCAGTGTCCCGTCGAGGGCTGCGGGAAGACCTTCTTCCTAAGGGCAACCCTTACTAAACATAGTCGAACTCACACAGACACGCGTCGTTATGTGTGCATCACTTGTGACAAACGGTTCTTGGACAAGCAGACGTTAGATGAGCATGGAGTCACACACTTACAGATCAAACCCTTCCAATGCCACATATGCCTGAAGCAGCTGACCCGTCGCTCGCGCCTGCGCATGCACGTGCGCGCGCACGAGGAGGAGCTGGCGCCGCGCCTCGTGTGCGTGTGCGCCGTCTGCACGAGGGCCTTCAGAGATCATCGGCATGCACAGGAACATGCAACAAAATCAACGGAATGTATCGAAGCGTTTACAAGCGAGTTGAAGGAGGAGGCGGAGGAGGTGTCGGTGCAGTTGTCTCCCACTAGTGGACTAGTGAGACATGCTGTGCAGATTGTTGAATCTCCAAAACTATCAAAGCCAATAAAGCGCCAGGTGTCAGCGGCTGCAGCGACTCCCCTTCTGTCTCAGTTGGCAGATGAAGCGCGCGCGCTCATCAGGGTCGTCGAGATAGAGAAGGCCTTCCGATGCGAGTACTGCGAAGATGTGTTCTACTTGGAGAGTGGTCTCAACAGTCACCGTGCTATACATAAAGGTGTCAAGAATCCTTTCACCTGCCACATCTGTAAAGTTAGCTTCGCCACTTATTCCAGATGTACAACTCACAAAACAACGCACGGTTTCTACAAGCGCTCTCTGGCGGAGGCCACGAAGCAAGCGGACGGGGAGGACCCCGCCCGCTCCGCTACCGGGATACTGGGGTACGGGGACTTCCCGGTCGTCAAACACTTCCTGTGCGAGGACTGCGGTCGTTCGTACCTGCACTGGACGTACCTACAAGTACATCGACGTATGAAACACGCTAATGAAAACTTTCTATACAAATGTAATCAGTGCGAGCTTACCTTCCCTAACAGTTGGAGCATGGCGTATCACCGTAAGAAAGTGCACGGTAAGACGGTAGCCGACGAACCTGGAACTGCCAAACAGAACAACAGGGACGATTATAGAATTTTAAACAAAGCTACTTTTTATACCCGTGTCGCGAAAATGTCGGATGTAAATTTCGAACAAAGATGTGCGATCAAATTTTTGGTGAAACTTGGGACAAAACCGGCGGAAATTTTACAAAAACTTCAGACAGTGTACAAGGATGATTGTTATTCGAAAACACGCGTTTACGAGTGGGCCAAGCGGTTTAAGGAGGGAAGAGAGTCGCTCGATGACGATCCGCGGGAAGGTGCTCCTTCCACGTCTCGCACCGACGAAAATGTTGCCCGTTTGCGCGCGAAACTGAACGAAGACCGGCGTGTTAGCCTTCGAATGTTAGAGGAGGAACTAGGCATCAATCGAGAAACAATTCGACGCATGTTGCATGAAGATTTAGCAACAACGCTGCCGCACCCCCCATACAGCCCTGATCTAGCCCCCTGTGACTTTTTTCTATTCCCAGAAATAAAAAATCACCTGAAGGGAATTCATCACGGGGGGTTAGAGAAGGTGAAAGAAGCCACGACGCGAGTTCTGAAACAGATTCCACAAGCGCGCTACGAAAATTGTTTCCAGGCATGGGAGCGCCGTTGGCGCCGGTGCATAGAATTAGGAGGGGACTACTGCGAAGGTGTCTAA
Protein Sequence
MTETQAPLILCMENATGEEVALRIEPDDNFQMFLDKSRTLLGYDVDINSITRNQPVSLSENVYQFLINAEQNLQADDLTHNFDQMLDTNDGANDLVYILDDGTQIRASQIHFDNDDPLVDLTAETIPFVKYADDITDVFFDNVQVQETKKINICESPVSRWSSKNSSPKCSFINSLPFKLVCNNTSGFEAQFTKYLETNNTKTYATLNPVTTRNKSPKSLIKDNFKNYDDNYQRNDNFSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKNWSKPLSYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFTPCRMKSANQFLNPDEFLVIRNNQQYIFQKVTNFSFTHFGKPIETTSKTEKKIDKEEFVKVEIGPDGEIITKPYRSDDIIIMKDEQKDGSSSDVEIIEPEPEIDNIIDNLEEDDEEVKEFLGKYQVDDSEVTELKCRFCEKIFPDLAAVADHCETHKHDLEDGEVYPCPLCNYGYANLKWLKAHVKAAHEKTEAQKVLKEENEPPKEENKDGEETPIKASSPIATRTRSSSKKDDGDKKDNEKSDEIKADSNTETKEPPIIKTEVKQECVESSEDEIWIVQTVDDDATQELQKLLCGAKVKEDRQDGESEKTPKCSNCSQVFGNREDLSNHRCRKRNRKRKSKDLGNLICIPTEEDFLKRAQGRPRPPETSIDNDLLVMFPRKRRNREPTSNPQVVTCHNCNESFTSKVRLKFHMQFHESSSQARTDGRYSCSECDDATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCITCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVCVCAVCTRAFRDHRHAQEHATKSTECIEAFTSELKEEAEEVSVQLSPTSGLVRHAVQIVESPKLSKPIKRQVSAAAATPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLAEATKQADGEDPARSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSMAYHRKKVHGKTVADEPGTAKQNNRDDYRILNKATFYTRVAKMSDVNFEQRCAIKFLVKLGTKPAEILQKLQTVYKDDCYSKTRVYEWAKRFKEGRESLDDDPREGAPSTSRTDENVARLRAKLNEDRRVSLRMLEEELGINRETIRRMLHEDLATTLPHPPYSPDLAPCDFFLFPEIKNHLKGIHHGGLEKVKEATTRVLKQIPQARYENCFQAWERRWRRCIELGGDYCEGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00043879;
90% Identity
iTF_00712356;
80% Identity
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