Basic Information

Insect: Agrotis segetum
Gene Symbol: znf423
Assembly: GCA_036375495.1
Location: JAQSVV010000162.1:266445-270689[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0015 0.14 13.7 1.9 1 23 84 107 84 107 0.92

2 15 0.05 4.5 8.9 0.1 2 23 134 156 133 156 0.95

3 15 0.14 13 7.5 3.6 2 23 179 200 178 200 0.92

4 15 0.00079 0.071 14.5 0.3 1 23 204 226 204 226 0.95

5 15 0.017 1.6 10.3 0.9 1 14 231 244 231 245 0.91

6 15 0.79 71 5.1 1.3 1 23 328 351 328 351 0.93

7 15 0.0034 0.3 12.6 0.1 2 23 378 400 377 400 0.95

8 15 0.025 2.3 9.8 3.0 2 23 423 444 422 444 0.97

9 15 0.021 1.9 10.1 0.0 1 23 448 470 448 470 0.96

10 15 0.0012 0.11 14.0 3.4 1 23 475 498 475 498 0.97

11 15 0.023 2.1 9.9 0.9 1 23 504 527 504 527 0.91

12 15 0.03 2.7 9.6 1.4 2 23 535 557 534 557 0.96

13 15 0.0016 0.14 13.6 1.5 1 23 563 585 563 585 0.96

14 15 0.00035 0.032 15.6 0.2 1 23 591 613 591 613 0.99

15 15 5.8e-05 0.0053 18.1 3.2 1 23 619 642 619 642 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0015	0.14	13.7	1.9	1	23	84	107	84	107	0.92
2	15	0.05	4.5	8.9	0.1	2	23	134	156	133	156	0.95
3	15	0.14	13	7.5	3.6	2	23	179	200	178	200	0.92
4	15	0.00079	0.071	14.5	0.3	1	23	204	226	204	226	0.95
5	15	0.017	1.6	10.3	0.9	1	14	231	244	231	245	0.91
6	15	0.79	71	5.1	1.3	1	23	328	351	328	351	0.93
7	15	0.0034	0.3	12.6	0.1	2	23	378	400	377	400	0.95
8	15	0.025	2.3	9.8	3.0	2	23	423	444	422	444	0.97
9	15	0.021	1.9	10.1	0.0	1	23	448	470	448	470	0.96
10	15	0.0012	0.11	14.0	3.4	1	23	475	498	475	498	0.97
11	15	0.023	2.1	9.9	0.9	1	23	504	527	504	527	0.91
12	15	0.03	2.7	9.6	1.4	2	23	535	557	534	557	0.96
13	15	0.0016	0.14	13.6	1.5	1	23	563	585	563	585	0.96
14	15	0.00035	0.032	15.6	0.2	1	23	591	613	591	613	0.99
15	15	5.8e-05	0.0053	18.1	3.2	1	23	619	642	619	642	0.98

Sequence Information

Coding Sequence: ATGAAACAAGAAACAGGCGACATAGCATCTAAAGGCAGTGTAGGAGAAAAACAGGATACGAAAGACATGACATTTACAGAAAATGTACATGATATAGAAAGAACTAACGAAACAGACAgtatagaagaaaaaaataaagaagcagAAAAAATAACACCAAGAACGGAACTTTtaaaacatagaaaaataattaaagaaataCTTGATAATTCTAACGCTACACCAATACGACGGTACGGAGGTATTGGATACAACTGCTGCTATTGTTCAGAACAGTTTGAACAACCTGCTGACCTGAAAAAACATACATTGGACAACCACAATGATGTGGCAGAAGCAAACTTTATGAAGAAAATGAACATGTCAGAATATGTCGTCAAATTAGACATAACTGCACTAACATGCAAGATATGTAACGCTGAAATGAGTAATCTGGACAACTTAGTTCTACACCTTAATAATACACATGACAAGAAAATAGATGTGAACTATACGAACCACATCTTCCCTTTAAAATTGGATGACAGTTTACTCAAATGCATCTTTTGTGGTCATACTTTTACAACATTCAGAACTCTGGTTGGACACATGCATGTTCATTACAGAAATTACGTCTGCACTATTTGTGATGCAGGATTCGTAAATCGAAACTCATTTACTCAACATACGGTTAACCATAAAACAGGGAGTTTCGTTTGTAGTCACTGTCCAAAAGTCTTTAATACTCAAGGTAAACCTCAGGCAGTTACAGTCGCGATTAAAAAAGAAGTCAACAAACCGGATCAagctaaaaaaggaaaaataacaaCTACGAAAGTTCCTGCTATTGGTGCGGGACACCCTAGAGTAGCAGGGTCTGACTGCAATAATCCTATAGCTTCAAAATGGTTCAGTTATGAGATCTACAAACATAAAtctaatattattgaaataatgcGCAGTTCTAATGCTACACCAATTAAGATGTGGGGAGATAAGGGTTACATGTGTTGTCACTGTGAAGACCAATACCCAGAGGCTGCAGATCTTAAGAAACACACCCTGGAAGAACATGACGATGTATCCAAAACATGTTTCTTGAAAAACATGAGCATGTACCATTACATCGTCAAATTAGACATCACTGATCTACAGTGCAAGATTTGTAGCAAAAGTATTGACACTCTTGAGGAACTAATGGAGCACTTACAGAATGAACACAAAAAACTTATATATACAGACATCAAAAACCACGTAATCCCTTTCAAATTAAACACAAAACCCCTCGAATGTTTCATCTGCAAGAATGTATTCCACAAATTCAAACTGTTGACCATTCATATGAATAAACACTACAGAAATTATGTTTGTGATATCTGCGATGCGGGATTCGTAAATATCTCTGGGATTAGGCTTCATAAGTCCATACACAAGATTGGAAGTTACAACTGTACGAAATGTAATATGACTTTCGACACCAAAGCTAAGAGAAATCGGCATGTAAAAACTAAGCATACCAAAGAAATTCGCCACACTTGCGGATACTGTAAAGAATCTTTCAACGATTACAGAAAAAAGGAGGCTCATCTCATAGCTGCACACGGAATGACTCAACCGAAACTAAAATGTCAAGCTTGCGACAAATTATTTGATCACCAAAAACGTTTGGCCGTCCACGTGAAAAGAGACCACTTGATGGAAAGACCACATGCATGCACAGTATGTGAAAAGAAGTTCTTTGCTTTGGGCGAGCTGAGAAATCATATGACGAAGCATACAGGAGAAAGGCCTTACAAATGTGAGGTTTGTTTAAAGGCTTATGGATTAGCGAAGACCTTGAGAGAGCATATGAGGATTCATAATGATGATAGGCGTTTTAAATGTGAGCAATGTGGTCAGGCTTTCGTCCAGAAGTGCAGTTGGCGAAGTCATATGAAGTCTAAGCACGGGGAAAAAGTTTAA
Protein Sequence: MKQETGDIASKGSVGEKQDTKDMTFTENVHDIERTNETDSIEEKNKEAEKITPRTELLKHRKIIKEILDNSNATPIRRYGGIGYNCCYCSEQFEQPADLKKHTLDNHNDVAEANFMKKMNMSEYVVKLDITALTCKICNAEMSNLDNLVLHLNNTHDKKIDVNYTNHIFPLKLDDSLLKCIFCGHTFTTFRTLVGHMHVHYRNYVCTICDAGFVNRNSFTQHTVNHKTGSFVCSHCPKVFNTQGKPQAVTVAIKKEVNKPDQAKKGKITTTKVPAIGAGHPRVAGSDCNNPIASKWFSYEIYKHKSNIIEIMRSSNATPIKMWGDKGYMCCHCEDQYPEAADLKKHTLEEHDDVSKTCFLKNMSMYHYIVKLDITDLQCKICSKSIDTLEELMEHLQNEHKKLIYTDIKNHVIPFKLNTKPLECFICKNVFHKFKLLTIHMNKHYRNYVCDICDAGFVNISGIRLHKSIHKIGSYNCTKCNMTFDTKAKRNRHVKTKHTKEIRHTCGYCKESFNDYRKKEAHLIAAHGMTQPKLKCQACDKLFDHQKRLAVHVKRDHLMERPHACTVCEKKFFALGELRNHMTKHTGERPYKCEVCLKAYGLAKTLREHMRIHNDDRRFKCEQCGQAFVQKCSWRSHMKSKHGEKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00042074;
90% Identity: iTF_00042074;
80% Identity: -