Aseg020786.1
Basic Information
- Insect
- Agrotis segetum
- Gene Symbol
- egg
- Assembly
- GCA_036375495.1
- Location
- JAQSVV010000197.1:1482769-1505467[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8 1.7e+04 -3.5 0.1 29 38 1867 1876 1840 1877 0.65 2 2 5e-13 2.2e-09 37.7 0.0 4 73 1908 1970 1905 1974 0.88
Sequence Information
- Coding Sequence
- ATGAGTGATAAAGACGAAAAAGACAATAAAGAAGACGATACGTCGCAAATAAATCAAGATGGAGTTACGAAAAACCCCGAAACTTTATTTGAGGGTAATGTACTATCTTCAGATCTAAGTAAGGCAAATAATAGTGCTGTTACAGAAAATATGCCTCATTCGCCCATAGAAGGTAATGGAGATAATAAAGAAGTCTCAGAACTTGATTTAATAGAAGCTGAGTTGACAGAAATGTCAAAGGAATTGAATATGGATGCAGGCGAAGGTTCTACAGCCAAAGTAAAGGTTGGCAAAGATGCTAAAATAATGGACATACTTATTGAAATGGATGCAAATGCATCTAAAACCGATGCTAAAGAGGACAATGATGAGACAGACATCGACAAATGTGATGATATCAAACTTAAAAAGACTGGTGATGTGGAGGACATTGATGATGAAGATATAGAACTCAGatgggatgatgatgatgcgagCAATCAACTTGCGAGTGATGAAAAGAATGACAATATTCTCTCAGAAGACCAACTTTTGGAAGATTCTTCAGATGTTTTAACTAAAGACACTAATCCTAAAAGTGTAACAGTAAAAGATGATAATGAAGAGAAGAAATTTACAAATGATGATAATTTGAAAGAAATTGAAGCTCCTGAAGAATCAGCAACTAGCCCAAAATTAGAAATCCCTACTGAAAAGACTGATGATGAAAAATCCTTAGAAGATGAGCTCTTAGAAGAACCTGATGTTCACACTGAAGATATTAATAGCCCAGAAATGATATTCTCTGCAGAAGAAAGTATGGATAGAGATTTCATCAAGGTTTTAGAAGACAAATTACTTGATGAAGATGAAGTGAATATTGAAAAGGATGTTTTAGTTCCTGCCAAAGATATTCTTGAAGAGAAATTTATGGATAAAGTAATAAAAGAGACTGAAATTCCCACAGAGGATGCAAATGATAAAGAAACGAAAGATAACCTTGATATTATAAAAGAAGCTGAATTATTAGATGAATCTGAAAGCAATACTGAAGAAAAGACTGCATCATTGAAGATGACATCTTTCACAGATGTCATTCTGAATGAAGATAATGCTGATGGTGTTTCAGAAGAAAATCTTATAGAAAAACCTGATCTAAAGGACAACAATTCTACAAATGAATCTGAGAATGACATTGAAAGTGATGTTCCTGTAAAAGAACTCCCAATAAACAAAGAACTCGttgatgatgatgttctgcTAGAAGAAGAGCTTTTGGAAGAAACTGATGCAGCTAAAGCAGTTCCTGAAAGTGTCACTATGGAAGTTGACGATGAGAAAGAAGGAGAGTTGCTGAAGGATGATGAAGTTGAAGATGATAGCCATGCTCCTATGGATGTAGATGTTAGTGATCCATCAAATGAAGATGTGgaagacaaaattattgatCAGCCAATGGCTGAACAGTCCATAATAGAAAAAGAAGAGATAGCAATCCCAACAGATGATCAAACCAGTCTAAAAAAGGTTGATATAGATCAACCAACAGCTGAAATCCAAGGTATTGATGAAACTGATAAAGCCGTTCTGACTGAGAAAATTATTGATCAGCCAGTTGAAGATGCAACTAAAACAGTTGAGACTATTCCTGCTGAAGAACAATCCGAAACaggtgaaattaataaaaaatctgcTATTGAAGATAAATCAAAAATTGACGAGGAATATATAGATTCAGATATTTTGGAAAAAGAACATGAAAATCAACCAAGGACagaagaaaagaaaattgaagATCAAATTACTATAGAAACTGATACGGATGCACAATCTATAAAGAACTCTGAAGAAATTGTTCCACTGCCcatttcaaatactgaaatcgAAGAACCAGATAAATCTACTACAGACAAAAGTACACTTGACAAAGAAATCGTCATAGAGAAGGATCCAGAACAACCTGAATTAACTACAAAAAGTGTACACAAAGACGTTGATACAGAAAAGACTGAAAAATCTAAAGATATTGCAGAACTAGACACAAGTATAGACAAAACCAATGTTACTGCTGATGAAACACCTACTTCTACAACATTCCAAGACAATGTTTCACCTATCAAAGGCATGCATGGTTTGAACAAACCAGATGTGATGCTAGAAATACCAAGCCAAGAATTAATAGACATGGATTGTACAGATTTATCTTTAAATCTAGATGGCCTTAATGACAGCATTACTGCTAACATAAAAACTGAAGATGACATAGTGACTGATGATCCAGTAGATACAGTCAAAGGTGATGATGAAACTGTAATTGAAAAATCAGTAGATACTACtaaagctgatgatgatacagCAAGCCAAAATACAGTAGATCAAGTAGCCGTAGTTACTGAAACAAAAGCTGCTGAAATTGCcactgaaaatgataaaacagTGGATCAACAAACCACAGCAGCTGAAGCAACCGTAGATGAAGTGCAAACAGAAAGTAAGAGTGAAGAAAGTGAGAAAAAGGAGACAACTGTAGTTCAAGCCACTGTTGAAGAAAATATGGAGAGGATGTTTGCCGATGATGAACCGGAAGTTGCTCAAGAAGTTCCTGAGTGCATTGCATCCACCAGCCAGTTGGACCTCCCAGTGGAACAGCCACCAACATCGTCCACACAGATGACTCCAGACACATCAGATGAGGTTCCAGAGGTCTCAGACAGTTTAGGACTGCTGGCCGAGTCTGCAGGACGCATGATGGACGATGAGGAGGgcgaagatgatgatgatggagatgatgatgatgattttgatcAGGATGAAAGCAGCAACCAAGTCTCAGCAGAGCAGTCCGAAGACTCGAACCCAGCTGCCTTAGAGTCTGAACCGCAGACCGAGGCCGAGGACAAGGAGTTGGAGACACCTGAACCCAAGGAGGGAGAGTTTCCATTCTTGTGTAACATTACTTCCGAGGATAAAGAGGAGAAAATGGACATCGAGGAATTTGGGACGaTTGAATTACAAGCAGAAACAATACAAGGAATGACTGAAGAGGCAAAATCAGCCGTGGATGCGATATTGAATAATGACAACACTGACGACGCACAGGGAGAGGATGCAAAAGAAAGTGCTGAACAAATGGACGTAGTGAAACTATCAGATGTATCCGATAACGAACTGGATATCGAACCTACTGAGGTTACGAAGCCTGTGACGGAAGCGAGCAAGGAGGGAGAAGaaaaacaaagtcAATCACCATCTAAATCACCAGCTGATGTCTCTCCCAAGAAATCACCACCCAATCTGAGCCAATCACCCAGTAAGCAATCACCGAGCAAGATGAAGAACTTGGCGATCACCACGCAAGTGGCGAGCGCGGTCGTCAATATTGTGGATTTGGAAGAGAGCAGTTCTTCAGAAGATGACGTACAAGAAACAGCAGTTCAAAACAAACCACAACCGGAACCAGAGACAACAGACGCCGACAAACCTTCCGACCCGGACTCAACAGTTACTACCGTCAACATACCAACGGGCATAGACATCATGTGCACTTCCGGCGGAAATACCTCAGAGATAACTACTAAAGAGGGGGAGGTTACTATCAGTGGCGTACCCAAACCTCCGCCTCATAGACCTgcCAGATTAAATACCAGCGAAGTTTCGATAAAGACCGTTAGTTCAGCCGAGCCGATGGTTATACCTGAAACtaagatAAATGAACAAGCCCAACCATCAGGCCAGTCTAAACCTAAGTTGAGTCTAGAAATATTCAGTCTAGATTCTGATGAAGACGACGGTTCGGCTAAAGAAAAATCGGCAGCAACGCCCCCACACAAAATGACAGCCCTAGAATTGGAGAAAGCTCGAGAAACTTCCAAATGTGTGAACTATTCTTGTACGAGTGACAGCACAGTACAATACAGAGTCGCCGAGACGGCTGAAGTGTTATTCTACGACGCGAGCAGGAAGAGACGCGGCATGATATGTCAGCCTTGCGCTGATGTCGTCGCGGGGAGAACTAAGAATCTGATTCAAGGCATAAAGGATATGACTCCTCTCCTCGAACTGGACATGGATAAATTATCACAAGACTTAGTGGAGATATCAGATTCTGAGTCTGAAGAAGATTATATGAGTAGTGAAGAACCGAAGGAGACTATTGGAGAAGAAGGGGCTAAAGTTGCAGAAAGCAGTCTAGCCAAGTTCTTGAACGAAACGTGGCAAAAATACAACATGGACGCGCGACTCAAAGAGACGCAGATTATGTTGGACGATGAGATCGAGAAGCTAGAACaGGACAGCAAAGAAATAGACGCGATGTTGAACGAGTGTCAGGCAGCGACCGACAAGCTGCGTTGCGAGCTGTATGCTACCTTCGAGTGTCGCAGACAGCAACAACCGGCCCTTCTCATACTGGACACGCCTGACAATAGGTTCATTGGTCCGGAAGAACCATGCGCCCTTCCTCCCGTCGAACCAATTTCGACTCGTCAAGCCAAGCGTCGTTTATCCTCCACTAACGAGGTGCCTGCCAAACGTCCCGCAATACCTCTGGGATATGCGCCATTGGATTCCGGAGATGCTAAGGAAAAGGCAGCTATTCCTGGACCAGAGATTCAAATGGATGATGATAAGGAAGACATATCAGTAGTGAAGTTATCAGCGGAGGCCGCTCCACCGGACCTTCCTCCTCCCGGGGAGATCTCCCGCCCTCCTCTGAGGGTGGGCATGCCCGTGTATGCCATGAAGAACGCCTTCGGACCCTGGTTCAAAGGAAGAGTGCTGGAGATACAGCCCAAGAATGCTAGCACTGGCAACCCATACTCTTTCTGCCGCGTGAGATTCGACCATAAAGCCAAGACCAACGGAAAAGTGTTGAAAGCTAGCTCCGTCGCTTATTCTGATCCCGCCGATGTCAGAATGACTATTGGTACTCGCCTCATAGCCCTGATCAAGGATTCTAATAAGCGTGAGACTTACTATGCCGGCGTTGTAGCTGAGATACCAAATCCCGTCAATagttatagATACCTCGTTTTCTTCGACGATGGCTACGCTCAGTACGTACAACATCAACACACCCGGCTAGTGTGCGAAAGCTCGCCGTTAGTGTGGGAGGAGGTACATCAGTTCTCACGGGACTTCGTGCGCGAATACCTGCTGGCGTACCCGGAGAGACCCATGGTCAGGCTGCACAAGGGACAGCATCTTAAGACTGAGTGGAACGGAAAATGGTGGTCATCCCGTGTGACCCAAGTGGACGCGTCCCTCGCGCAGGTGTTGTTCGTGGGCGACGGTCGTCGCGAGTGGATCTACCGCGGGTCCACACGACTGGCGCCGCTCTACCTGGAGCTGAGGGCCGCGGAGAGACACAGACCACGGCCTATGCCCCGGAGTAAAGCACAGCCTAGGTCCAACATGCCCTACGTGGAGTACACTCGCTCGGACGAGCAGGAGTCCAACAAACCAACAGACGCACAAATACAGACGCTGCAACAAATacagcaacaacaacaacaactgcAGAATGAGGAGATCCGTCGCCAGCGCGCCGTGGCCAAGAAGTCCACCTCCTCCGTCCCGTCTCCCGCGCCGCCCGCACCGCTACCACCCAGCGCGGACCCCGTCACCAGCAGGGTTGTGTACTACACGCCTAAAAACGCAGTGAAACCTCTGAAGATGGTGCCACACAAGTGCACTCCTAAATGCAAACGAAGTGACGTACTGTCTCTGAAGGAGTTGAGGACTTACAATCCATTGGCTAAACCACTGCTCAGCGGATGGGAGAGgcaaaTAGTCCGCTTCAAAGGCCACAAGGACGTAATGTACCGTGCGCCGTGCGGACGTCGTATCCGCAACATGCGCGAGCTACATCACTACCTGCGCTCCATAGACAGCGACCTGCCTgtagacctgttcgacttccaCTACTCCACGCACTGCCTCGCTGAGTTCGTGCTCAACAAGTGTCTCGTTGGGAAGAAGGTATGTATCTCGAGCTAG
- Protein Sequence
- MSDKDEKDNKEDDTSQINQDGVTKNPETLFEGNVLSSDLSKANNSAVTENMPHSPIEGNGDNKEVSELDLIEAELTEMSKELNMDAGEGSTAKVKVGKDAKIMDILIEMDANASKTDAKEDNDETDIDKCDDIKLKKTGDVEDIDDEDIELRWDDDDASNQLASDEKNDNILSEDQLLEDSSDVLTKDTNPKSVTVKDDNEEKKFTNDDNLKEIEAPEESATSPKLEIPTEKTDDEKSLEDELLEEPDVHTEDINSPEMIFSAEESMDRDFIKVLEDKLLDEDEVNIEKDVLVPAKDILEEKFMDKVIKETEIPTEDANDKETKDNLDIIKEAELLDESESNTEEKTASLKMTSFTDVILNEDNADGVSEENLIEKPDLKDNNSTNESENDIESDVPVKELPINKELVDDDVLLEEELLEETDAAKAVPESVTMEVDDEKEGELLKDDEVEDDSHAPMDVDVSDPSNEDVEDKIIDQPMAEQSIIEKEEIAIPTDDQTSLKKVDIDQPTAEIQGIDETDKAVLTEKIIDQPVEDATKTVETIPAEEQSETGEINKKSAIEDKSKIDEEYIDSDILEKEHENQPRTEEKKIEDQITIETDTDAQSIKNSEEIVPLPISNTEIEEPDKSTTDKSTLDKEIVIEKDPEQPELTTKSVHKDVDTEKTEKSKDIAELDTSIDKTNVTADETPTSTTFQDNVSPIKGMHGLNKPDVMLEIPSQELIDMDCTDLSLNLDGLNDSITANIKTEDDIVTDDPVDTVKGDDETVIEKSVDTTKADDDTASQNTVDQVAVVTETKAAEIATENDKTVDQQTTAAEATVDEVQTESKSEESEKKETTVVQATVEENMERMFADDEPEVAQEVPECIASTSQLDLPVEQPPTSSTQMTPDTSDEVPEVSDSLGLLAESAGRMMDDEEGEDDDDGDDDDDFDQDESSNQVSAEQSEDSNPAALESEPQTEAEDKELETPEPKEGEFPFLCNITSEDKEEKMDIEEFGTIELQAETIQGMTEEAKSAVDAILNNDNTDDAQGEDAKESAEQMDVVKLSDVSDNELDIEPTEVTKPVTEASKEGEEKQSQSPSKSPADVSPKKSPPNLSQSPSKQSPSKMKNLAITTQVASAVVNIVDLEESSSSEDDVQETAVQNKPQPEPETTDADKPSDPDSTVTTVNIPTGIDIMCTSGGNTSEITTKEGEVTISGVPKPPPHRPARLNTSEVSIKTVSSAEPMVIPETKINEQAQPSGQSKPKLSLEIFSLDSDEDDGSAKEKSAATPPHKMTALELEKARETSKCVNYSCTSDSTVQYRVAETAEVLFYDASRKRRGMICQPCADVVAGRTKNLIQGIKDMTPLLELDMDKLSQDLVEISDSESEEDYMSSEEPKETIGEEGAKVAESSLAKFLNETWQKYNMDARLKETQIMLDDEIEKLEQDSKEIDAMLNECQAATDKLRCELYATFECRRQQQPALLILDTPDNRFIGPEEPCALPPVEPISTRQAKRRLSSTNEVPAKRPAIPLGYAPLDSGDAKEKAAIPGPEIQMDDDKEDISVVKLSAEAAPPDLPPPGEISRPPLRVGMPVYAMKNAFGPWFKGRVLEIQPKNASTGNPYSFCRVRFDHKAKTNGKVLKASSVAYSDPADVRMTIGTRLIALIKDSNKRETYYAGVVAEIPNPVNSYRYLVFFDDGYAQYVQHQHTRLVCESSPLVWEEVHQFSRDFVREYLLAYPERPMVRLHKGQHLKTEWNGKWWSSRVTQVDASLAQVLFVGDGRREWIYRGSTRLAPLYLELRAAERHRPRPMPRSKAQPRSNMPYVEYTRSDEQESNKPTDAQIQTLQQIQQQQQQLQNEEIRRQRAVAKKSTSSVPSPAPPAPLPPSADPVTSRVVYYTPKNAVKPLKMVPHKCTPKCKRSDVLSLKELRTYNPLAKPLLSGWERQIVRFKGHKDVMYRAPCGRRIRNMRELHHYLRSIDSDLPVDLFDFHYSTHCLAEFVLNKCLVGKKVCISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042660; iTF_00040842;
- 90% Identity
- -
- 80% Identity
- -