Aseg031112.1
Basic Information
- Insect
- Agrotis segetum
- Gene Symbol
- -
- Assembly
- GCA_036375495.1
- Location
- JAQSVV010000657.1:1290547-1293075[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.6e-09 4.9e-06 27.1 0.0 2 45 13 55 12 55 0.92
Sequence Information
- Coding Sequence
- ATGCCGCCTGTAAAAGGACAAATGTTCCGTTATTCTGAAGCTGATATGGAAGCGGCTATACAAGAATGTAGGCGAGGTGTCCCGACAGCTACTGCGGCAAAAAAATTCGGCGTACCAAGAGTTACTTTAATGAATAAAGTGAAGGGAAAGACACCTATTAAACGTAAAATGGGAAGAACCTGTTACATGACCGAAGAAATAGAAAGTATGTTGGTTACATGGGCAAAAGCAATGGTGAAACAAGGTTTTCCAATAGGTAAGGATAATTTGCTAGATAGCGTTAAGAAAATAGTAGATGATTTAAATATAGAAACTCCTTTCAAGAATGGCAGACCTGGAAAAAGATGGTACACCAGCTTTTTAAAACGTCATCCTGATCTTATAACAAGACAGCCCCAAAACTTGACTGCTTCCAGAGCTTCTGTAACAACATCTCAGTTGAAAAATTGGTTTGAAGAAGTTAGCAGTTACTTGAATGATAATAGTCACAGTGACATTTTGAATGAACCGCGAAGAGTTTTTAATATGGATGAGACCGCTTTTTTCTTAAATCCTAAAGGAAGTAAGGTCCTAGCAGCTAAAGGAGATAAATCAGTGTACCAAAAAATTAACATGGATGAAAAAGAATGCTATACTGTACTTCTAGGTGGCAATGCTGCTGGAGATGTTCTACCTCCTatggtaatttttaaatatgagaGGATACCAAGAGATTTAAGTACGTCAGTTCCTGAATCTTGGGGTATTGGGCGTTCGGATAATGGCTGGATGACCAGAGAGACCTTTTATGAGTATATATGCAATATTTTCAACAAATGGTTAGATGACAAGAATATTCCAAGACCAGTTCTGCTTTTTATAGATGGTCATACGTCACATCTTTCTTTCCATGTCAGCAAATTTTGTTCCGAAAATGGCATTATTTTGATTGCTCTCTTTCCGAATGCGACGCATTTACTTCAGCCAATGGATGTCGCAGTTTTTAGAAGCCTCAAGGGAGCATGGAAAGCTGCAGTGCATTCTTGGCGGTTGGAAAATATTGATTCGCCTATTTTACGCAAAGCAAATTTTTGTCCTTTGTTAAACAAAGTGCTGAAGGATACATTGGTACatgaaatatttgtaaacggTTTTCGTAAGTGCGGACTCACGCCGTGGAACCCCGACGAAGTGTGCTGTGTCCTGGAGCCGCCAAACAATAAATCAGCCGATTTAACGGAACTACAGAAAATGGCGAAGATTAAGGAATTGGAACTTGGAAAAAAGTTTTTGGATAAGTACATAGACACTGAAAAAATAGTTAAGTTTAATAATTGTGATGAATGGCTTGGCGACAAAGAAGACGTAGAGTTgtttaaattatacaaaaatgttGAACTATCGTTAAAAAACTTGACAAGTCAGAATTTCGTACCAGAACCTAACAGTGCATCTGAAATAATACCTCCACTTGACGGCAATGTAGACGCAACATTACACATGTTTACAGATGACCCAAAAACACCTATTAAACTGCCTGATAATAACAGCGCAACTGAAATAATACCTCTGCTTAACGGCAATGTTGAGACAACATTATTTACCCTGACAGATGACCCAAAAACACCTATTCAACTACCTGATAATAACAGCGCAACTGAAATAATACCTCCACTTATGAATGACAACAATCATAATGTTACATTAGACGCCCAGGCAGAAAACTTTAAAACACCTATTAAACTAACTGTTAACAATACTTTCCAAAATCCTCACAGCATGAACATGAGTACAAACTTGATGATGCCATCCACATcaggaatacaaaaaaaaaactctagcgGTATGGCTATAATAATACCAAGTCCCTTCAAAAGAGCTTTGTTTTGGCCAACACCTaaagaaaaatccaaaaaaagaaagaaagaaaaaatacccTCTGTTATATCCTCAGTTCAATGGCAACAATATCATGAAAAcaaagagaagaaaaaaaatgaattagaggaagagaaaaaaagaagattagaggaaagaaagaagaagaaagaacaGAACGAAAAAGCAAGAAAACTTAAGACAGCTCAGAAACTAGCTAAGAAAAACCAAAATActgtgaaaaagaaaacttataagACTGATTATAATAGTGATACAAGTACTGAAGAAGAATGGGTGGATTCTGGAGATAGCGTAGATGATGTATCTGACGAGTGTGAGAATGGTGTTGAAGAATATGAATATACAAATGATGAAAATTGCCATGAAAAAAGTCAAATCAAGCAAGGTGATTATGTAATCATCAACTTTCCTGGTAAAAAGAAATACCATAAGTTTGTATGCattgtacaaaaaatatcacTTAGAGATATCGAAGTTATGGCTATGGTCAGCTGTGATCAAaccaaaacattatttaaagaaAACGACAAAGATATTAGTATCGTAAGTGAATCTCAAATCGTTGAAGTCCTCAAAGCGCCAAATATGATTATATCAGGTGATAGGATTAAGTATAAATTTGATTTTCCATTACAAGTTGATGGATAA
- Protein Sequence
- MPPVKGQMFRYSEADMEAAIQECRRGVPTATAAKKFGVPRVTLMNKVKGKTPIKRKMGRTCYMTEEIESMLVTWAKAMVKQGFPIGKDNLLDSVKKIVDDLNIETPFKNGRPGKRWYTSFLKRHPDLITRQPQNLTASRASVTTSQLKNWFEEVSSYLNDNSHSDILNEPRRVFNMDETAFFLNPKGSKVLAAKGDKSVYQKINMDEKECYTVLLGGNAAGDVLPPMVIFKYERIPRDLSTSVPESWGIGRSDNGWMTRETFYEYICNIFNKWLDDKNIPRPVLLFIDGHTSHLSFHVSKFCSENGIILIALFPNATHLLQPMDVAVFRSLKGAWKAAVHSWRLENIDSPILRKANFCPLLNKVLKDTLVHEIFVNGFRKCGLTPWNPDEVCCVLEPPNNKSADLTELQKMAKIKELELGKKFLDKYIDTEKIVKFNNCDEWLGDKEDVELFKLYKNVELSLKNLTSQNFVPEPNSASEIIPPLDGNVDATLHMFTDDPKTPIKLPDNNSATEIIPLLNGNVETTLFTLTDDPKTPIQLPDNNSATEIIPPLMNDNNHNVTLDAQAENFKTPIKLTVNNTFQNPHSMNMSTNLMMPSTSGIQKKNSSGMAIIIPSPFKRALFWPTPKEKSKKRKKEKIPSVISSVQWQQYHENKEKKKNELEEEKKRRLEERKKKKEQNEKARKLKTAQKLAKKNQNTVKKKTYKTDYNSDTSTEEEWVDSGDSVDDVSDECENGVEEYEYTNDENCHEKSQIKQGDYVIINFPGKKKYHKFVCIVQKISLRDIEVMAMVSCDQTKTLFKENDKDISIVSESQIVEVLKAPNMIISGDRIKYKFDFPLQVDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00043425; iTF_00711782; iTF_00745606; iTF_00745607; iTF_00745608; iTF_00357416; iTF_00147328; iTF_00147332; iTF_01246817; iTF_00147331; iTF_00147334; iTF_00147335; iTF_00147336; iTF_00147337; iTF_00147338; iTF_01246800; iTF_01246802; iTF_01246803; iTF_01246804;
- 90% Identity
- iTF_00745606;
- 80% Identity
- -