Aseg031893.1
Basic Information
- Insect
- Agrotis segetum
- Gene Symbol
- -
- Assembly
- GCA_036375495.1
- Location
- JAQSVV010000704.1:531167-539929[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6e-11 6.5e-08 33.1 0.2 4 39 149 184 146 188 0.90 2 3 1.4e-14 1.6e-11 44.7 0.0 2 45 202 246 201 246 0.96 3 3 9.9e-18 1.1e-14 54.8 0.1 1 43 253 296 253 298 0.95
Sequence Information
- Coding Sequence
- GGCAGTGGCTTGGAGGAGTTGGCACCGCTGGCGCCGGCGGGCCCGGCAGCCACGCCGGTGTGTGTCAAGCAGGAGCGAGCTGACTCCCCTCCAGCTTCAACCCTGGAGACACTGGAGTCAGCACCACATAATGCTAAGAGCGTGTCCTTGTTGGATCGTCACATGGAATTTATGAACGTCACCGAAGTGCCTGATTCCACTGACTTCATGCCGCTTCTGGCTGTCAAGGATGAGCCCTCCTCCGAAGGTGAACAACCACAGCTCAGTGGTGAAGACACAAGTGATTCCTGCGGCCGGCAAGCTTCGCCTGCTCCGCGACACAGCCCCAAGAGCTGGACCCAACAAGATATGGAGCGAGCTTTGAATCGCTCTCAGAAACCACCAAATGAGCCTTACGAAGGCGTCAGCTACAAGGAGGGCGCCGCCAAGTCCTGGAGCGAGAGCGACCTGCGGGGGGCGCTGCACGCGCTGCGGGCCGGGGCCATCTCCGCCAACAAGGCCAGCAAGGCTTATGGCATTCCTAGCAGCACACTGTACAAGATAGCCCGCCGCGAGGGCATTCGACTGTCGGCGCCATTCAACGCGGCGCCGACCGCGTGGCGCCGCGCCGACCTGCAGCTGGCGCTCGCCTCCATCCGCTGCGGCGCCAGCTCCGTGCAGCGCGCCGCCACGCAGTATGGGATACCCACAGGAACGCTGTATGGTCGTTGTAAGAGGGAGGGCATCGAGCTGTCCCGCTCAAACCCCACGCCGTGGTCCGAAGACGCCATGGGTGAAGCACTGGAAGCTGTCAGGATTGGGCAGATGTCCATAAACCAGGCGGCGATCCACTACAACCTTCCCTACTCCTCTCTGTACGGACGGTTCAAGAGGTGCAAGTATCAGATGCAGAGTGTCTCACAGAACCAGCAGCAGTCCCAGCACGATCCTCACAAACTGGAGCAAGAGCAGCAACCTCACGAGGTGCAACAGTACTACCACCAGGTTCAACCCCACCAAGAAACAGACCCGCACACATACACCCACATGCACGAGTACACCCACACCCACGACCCGTATGGACAGGGACAGTACTACCAGGGTTTTAATAGTATCGCGACCAGCTGA
- Protein Sequence
- GSGLEELAPLAPAGPAATPVCVKQERADSPPASTLETLESAPHNAKSVSLLDRHMEFMNVTEVPDSTDFMPLLAVKDEPSSEGEQPQLSGEDTSDSCGRQASPAPRHSPKSWTQQDMERALNRSQKPPNEPYEGVSYKEGAAKSWSESDLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQLALASIRCGASSVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQMQSVSQNQQQSQHDPHKLEQEQQPHEVQQYYHQVQPHQETDPHTYTHMHEYTHTHDPYGQGQYYQGFNSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041698;
- 90% Identity
- -
- 80% Identity
- -