Aseg012375.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrotis segetum
Gene Symbol
jarid2b
Assembly
GCA_036375495.1
Location
JAQSVV010000089.1:2429878-2444555[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-18 9.3e-15 55.8 0.0 10 89 1050 1126 1043 1126 0.88

Sequence Information

Coding Sequence
ATGTACATGTGTGGTTTCAGGGCGCGGTCTCGGCGCGTCCAAGCGCAGCGCAAATTCGCGCAGGGAGCCTACGTGCCGCCAAATGTCGCTGCCGCCGCCCCCGCGGACAACAGGCGCGACACGACACAAGACCGTTCGAACGTCACACGAAACCATATGACGGCCTCCAATTTATTAGACGTCGTATCTCTCCAGAGTATGCACTACCATTTGACTTCACAACCTGTAGTGCTCGTTGAGAGGCTGCGCGGCAGGCAGACGGCGCGCGTCGAGTCGCCGCCCTCGTCCAGGGACTCTTCTCACCCAGCGCTCTCGGAAAGTCAAGATGAAATTTTCCAGCCAAAACCTGTTGAGGGGCCCAGATTACGAACTGCTAAAAAAGCGAAAGAATATAAACGTGTACACGCCATGTCTTTGCGTTCACGCCGCCTTAGCAAGcttcaattaaataaattacttgcCGAAAACAGTGGTACCCCCAGAAAGGTTACATTTAAAAGGAAGAGGCACTCTTCTGATGAGGATGAACCCCTCATattccaaaaaaataagaataaaaaaacatcGTCTAAATTTACTTTGCAAGGGGTTGCTGCCAAAGAGGGCCATCCCTTAGTGGGCATTCTTAAGCAAGGCACCCCCCTTATGAACGTTAGTAAGCATTATACTCCTAAAAATCCCTTAAGCCCTGTTAAGCAGAGCGTTCCCAGGAAGCAAAGCACTCACAAGATATTgagtgataaaaaaaatgctccCACGGTTTGCACTCCTGAAAATGGCTCTCCCGAGAAATCTCCAAAAAAGAAACATCCAAAGAAATGCTCGACTGAACAGCCCAAGAAGAACTCTCTTGACCGGAGTTCTCCCGAACTGAGCTCTCGCGAGGTATCTCCAAAGAAGTTACTACCTAAGAATAAAGCAGTCGAACAGGGCTCTCCAAAAAAGCAACATCCCAAGAACACAGTTGAACAGGGTTCTCCTGTTTTATCTCCAAAGAAGAAACTTCCCAGGAAGACTATTTCTGAAGAGAGCTCTCTCCAGAAATACCTAAACAAGAAGCAAGACAAGAAGAGCACAACGTTCGATAAGAAAAAATCTCGCGCAGATATCACACCACTGAAGAAGTCGAAAACCAAACTAGTAATTATTTTGCCCGAATCGTCCGCGACGGTGGGTGCCAATGCAAATCAGGTACAAACGGATGAATCCACTGATTTCGATCGGATTGTTACGAACCGTGACAAACAAGACGATCCTGTTGTCTCAGGTGACCGTCTCGACACAGATAGCACGGTCGCTTCGTGTGTCCGAGACGCTGCTGATGACAGACCCATACCGTCTGTCCAGGTTAATCCGAACAATGAAGATCATGTACCAACAGGTGATAGAGATGAAGAAGATATTCCATTACATATTAACGATAATATAAAAGATCCAGATCCAGCAAGTAAGGTTAACGTTAATGATGAAAGAAACAATGCTATTGATGCGGAGGAGGACGAGGAAGATATATGGAGCTTTCTGGCACCTGTTAACTCACTTAACAAAGCTGTCTCTAAAGACAGGGTAGTCGAGGAACCCGTAGCTTCGACATCCGGAATGAATACGTATTGTCCCATGGTTTTGTCTCCAGAACCAAGACCTGGACCAAGTGGCTTGCAGTATCAATTCAGCTCATACGATTCTGATAATGATGAAAAAGTGGACTTCTTCAGTGACTCTTCAATTTATTTAGAAGAACCAGAATTAAACGAACAATATATACGCGAAGTGATGCATCAGACAGCTATAAGCCTTGAGCTTGAACGTACAAAAAAGCTTCAAAAGAAAACTTGCATAGGGGCATCGTTGCGGTCCGCCCAGGACGTAATAAAAGCATCCAAGGAACTATTAGATTCGCGATGCAAAGTCTGTAAACCTTGCGTAAGAATAAACAAACTCCTGAAACTTTCTTCACTAGTAATATCAAAAATAGAATTAACTGACGAAAATACTGGACAGGATAGTAATACCGACGCTGCAGATTTCGAGCCTGGAAGACGGGAAGAAGAACACGAAGACAACGAGGAACCTCCGGAGCGGACGGACGGAGACCAAGGCTATCTATATTTGGATCTACTGCCGAAACAGTCCCGTTTGATAGTTAAAATAGGAACTAACGTCCAACACGGCAGAAGCCTCTTGTCAGTTTGTTTGATACCGAGAAGTAAGTCAGGTAAAATGGAACTTTTTTTACTTGAAGAAAAAGAGAGTATTCTTGATAACCTCATTGAGACTCTCACAATCAGTCAAGAGTCGGAAAACACAGATATTACTAATGGCAATGCTGCCACTGTACGTGAAAATGTAGAGACTAGAAATGACAATACTGAAGGTCGAATGGATAGGTCCCACGCTCGCATTAGTAATCCAGTGGGTCGCACGCTGAGCATATCATCAGATTCAGATCTGAGTGATAGTGGGATTATTTTTGAACAACAGAAACCTAACCGAGTTGTTCAACATCATAAAATGATGGCCGCTCGGCGACGTTTAGCAAAAGCAAAGATGATGCAAGACCACATCagacaagaaaaagaaaaagaaatagctCATATTGAGGAGCAAAAACGCAAAGAAATATCTCGGATTATGGCTGAGAAGACGATGTGCGAAGCAGAAATATCACGCTATCAGGAAAGGTTCACAACAATGCAGCAGGAGAAAGAAAGAGAGTTTGCTCGTCTTAAAATGCAGATCAGAGAAAAGGTGCGGGAAGAGATGGAAGCTGATCGCAGTATGATTGCCGAGGTCGACGATTTGGCAAAGCTTCTCGAAAATGAAAAGGATGCCAAGAATATGAACCCAGAATACTTTGACGATTTTGAACAGCCTAGCTGCAGCGGCTTGGTGCCGATGGAAGGCGGGGTGCTGGTTGACGCGCCTGTGTACCATCCTACTTTAGAGGAATTTGCTgATCCCCTTATTTTCTATGAGAAGATTTGGCCAGAAGCAGTTCGTTTTGGAATCTGTAAGATAGTGCCCCCTATTGGTTGGAATCCGCCACCCCATAAAGTGCATGATGATATGAGGTTTGATGTCACGAACCAGTATATATCCCGCCTTTTTAGCCGGTGGGGACCCGCCGCAAGAGAACTTTGTGCGATCAAACTTTGCCTACAACAGCAAAAAATTGTAGTTACAAGATTACCCTGTCTGGATGGTGTTGAAGTAAATTTGCCAAAATTATACCACCTCGTGCAACGTCACGGCGGTCTTGAAACTGTTATAAACAAGAAGCGATGGGGTAGAGTCGCAGAAGATATGAAATTTACTAGAGGACCAATTACCGAGAGGAGATTGGATCAAATTTATGTCAAATTTCTTCTACCATATGACACCCTTTCTCATCAGGAGCGCCAAGAAATAATGGCAAAGGTAGAAATGGCATGGCACCGTAAAAATCAAAAGCTTTTAGACCGTGCCATGAACCCACTGTACCGCCAGAAGCGAATGCTCGGCTTGCAGGAAGAATCCGAGGAAGAAAATGAAGACCCAGACACGATGGTAGCTCTCAAAGAGTCGGAGGACTGCATCATCAAGGGTGCAGTGACTACCCTAGCTAAATTTAAAAAGGTTGCCACCATGACGTACGAGAACACATTTGGACAAGAGTCGGAGAGTGGCACCCCTCCTAACTTAAAAGATGTCGAGGAGGAATACTGGCGCCTTGTGACGCATGGCGCGGAGCATACGTGCGTGAACTCTGCAGCCATTGACACTGGCGAAGAAGGCTACGGcttcacaaaaaataagaaCGAGCCTTACGGTCTCCACCCATGGAATCCCAAGATGGTTAGCCAGAATCCTCGCAACGTTCTCTCCTACTTAGATTCCATAATTGGCCTCACAATACCCACGCTACTGCTGGGTATGTTATATTCGACATCATGCTGGCATAAGGATCCACACGCAATAGCTTGGATAGAATATCAGCACGAAGGACCTGCCAGAATATGGTATGCTATACCAGATCATCAGGCGGATACATTCAGGAAGGCTGTAGAAATTCTTAGCCCTACCTCTGTGCAAAATAAAAGTTTGTGGCTGCCGACGGACATCACGATGATCCCTCCGAACATGCTGCGCGAGCACAACGTGACGCTGTCACGCATCGAGCAGAACCCGGGCGAGTTCATCATGGCTTTCCCCAACGCCTACACATGCTGCATCAGCACCGGCTACACGGTGTCTGAGAGCGTATATTTCGCACCGCCATCCTGGCTCAAGAGACTGTGGAACGTCTTTaagGAGACCCGTGCTAGTTGCGAGCCCACAATGTTTGCAATGGAACACCTATTGTACAACATCGCGAGAGACCCGACAGCTGACCGAGAAATAGTGGAGACCGCGCAGCCGCTATTCGACAGAATGCTACGGGAAGAAGTCACCAATAGACAGATGTTACAAGAAAGGGGTGTATCATTTGTTCAAGAGCTGCTGAGCTCTGAACCAACCCCATCAACATCAAGTGGAAAGAAAAAGGGGGGTAAACAGTACATACCGCGCGATCAAGAGGAATGCGAGTATTGTCGTGCAACATTGTACCTGTCCAAGGTAAAGGGTCTCACAGAACGCAACACCTACTTGTGCTTGGAACATGCACTGAAGGTGTTGGAGTCTGACAAGCATAAGGACACGGATGTCAGCCAAGTCCAAGTTCTGGTTCACGTCAGCGTCAAGGAGCTGAACTCTGTGAACGACGATATGAAGCGGCGCTTGGGCTTCCAATAA
Protein Sequence
MYMCGFRARSRRVQAQRKFAQGAYVPPNVAAAAPADNRRDTTQDRSNVTRNHMTASNLLDVVSLQSMHYHLTSQPVVLVERLRGRQTARVESPPSSRDSSHPALSESQDEIFQPKPVEGPRLRTAKKAKEYKRVHAMSLRSRRLSKLQLNKLLAENSGTPRKVTFKRKRHSSDEDEPLIFQKNKNKKTSSKFTLQGVAAKEGHPLVGILKQGTPLMNVSKHYTPKNPLSPVKQSVPRKQSTHKILSDKKNAPTVCTPENGSPEKSPKKKHPKKCSTEQPKKNSLDRSSPELSSREVSPKKLLPKNKAVEQGSPKKQHPKNTVEQGSPVLSPKKKLPRKTISEESSLQKYLNKKQDKKSTTFDKKKSRADITPLKKSKTKLVIILPESSATVGANANQVQTDESTDFDRIVTNRDKQDDPVVSGDRLDTDSTVASCVRDAADDRPIPSVQVNPNNEDHVPTGDRDEEDIPLHINDNIKDPDPASKVNVNDERNNAIDAEEDEEDIWSFLAPVNSLNKAVSKDRVVEEPVASTSGMNTYCPMVLSPEPRPGPSGLQYQFSSYDSDNDEKVDFFSDSSIYLEEPELNEQYIREVMHQTAISLELERTKKLQKKTCIGASLRSAQDVIKASKELLDSRCKVCKPCVRINKLLKLSSLVISKIELTDENTGQDSNTDAADFEPGRREEEHEDNEEPPERTDGDQGYLYLDLLPKQSRLIVKIGTNVQHGRSLLSVCLIPRSKSGKMELFLLEEKESILDNLIETLTISQESENTDITNGNAATVRENVETRNDNTEGRMDRSHARISNPVGRTLSISSDSDLSDSGIIFEQQKPNRVVQHHKMMAARRRLAKAKMMQDHIRQEKEKEIAHIEEQKRKEISRIMAEKTMCEAEISRYQERFTTMQQEKEREFARLKMQIREKVREEMEADRSMIAEVDDLAKLLENEKDAKNMNPEYFDDFEQPSCSGLVPMEGGVLVDAPVYHPTLEEFADPLIFYEKIWPEAVRFGICKIVPPIGWNPPPHKVHDDMRFDVTNQYISRLFSRWGPAARELCAIKLCLQQQKIVVTRLPCLDGVEVNLPKLYHLVQRHGGLETVINKKRWGRVAEDMKFTRGPITERRLDQIYVKFLLPYDTLSHQERQEIMAKVEMAWHRKNQKLLDRAMNPLYRQKRMLGLQEESEEENEDPDTMVALKESEDCIIKGAVTTLAKFKKVATMTYENTFGQESESGTPPNLKDVEEEYWRLVTHGAEHTCVNSAAIDTGEEGYGFTKNKNEPYGLHPWNPKMVSQNPRNVLSYLDSIIGLTIPTLLLGMLYSTSCWHKDPHAIAWIEYQHEGPARIWYAIPDHQADTFRKAVEILSPTSVQNKSLWLPTDITMIPPNMLREHNVTLSRIEQNPGEFIMAFPNAYTCCISTGYTVSESVYFAPPSWLKRLWNVFKETRASCEPTMFAMEHLLYNIARDPTADREIVETAQPLFDRMLREEVTNRQMLQERGVSFVQELLSSEPTPSTSSGKKKGGKQYIPRDQEECEYCRATLYLSKVKGLTERNTYLCLEHALKVLESDKHKDTDVSQVQVLVHVSVKELNSVNDDMKRRLGFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00040578;
90% Identity
-
80% Identity
-