Aexc006089.1
Basic Information
- Insect
- Agrotis exclamationis
- Gene Symbol
- jarid2b
- Assembly
- GCA_950005045.1
- Location
- OX465416.1:2341216-2366773[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-18 7.3e-15 56.6 0.0 10 89 1038 1114 1031 1114 0.88
Sequence Information
- Coding Sequence
- ATGTATGTGATCATTTACGATGTATGTGATTTCAGGGCGCGGTCTCGGCGCGTGCAAGCGCAGCGCAAATTCGCGCAGGGCGCCTACGTGCCGCCAAATGTCGCTGTCGCCGCCCCCGCGGACAACCGGCGCGACGCCGCCCAAGACCCCTCCAATGTCACACGAAACCATATGACGGCCTCCAATTTATTAGACGTCGTATCTCTCCAGAgTATGCACTACCATTTGACTTCACAACCTGTAGTGCTCGTTGAGAGGCTGCTCGGCAGACAGACGGCGCGCGTCGAGTCGCCGCCCTCGTCCAGGGACTCTTCTCAGCCAGGGCTCTCGGAATGTCAAGATGAAAGTTTCCAGCCGATACCTGTTGAGGGGCCCAGATTACGAACTGCTAAAAAAGCGAAAGAATATAAACGTGTTCACACCATGTCTTTGCGTTCACGCCGCCTTAACAAgattcaattaaataaattaattgccGAAAACAGTCTTAGTCCCAGAAAGGTTACATTTAAGAGGAAAAGGCACTCTTCAGATGAGGATGAACCCCtcatattccaaaaaaataagaataagaaaACATCGTCTAAATTTACTTTGAAACAGGTTGCTGCCAGGGAGAGTCATCCCTTAGTGGGCATTCTTAAGCAAAGCACTCCCCTAATGAACATGACTAGGCAGTACACTCCTAAAGTTCCCTTAAGCTCTGTTAAGCAAAGCGTTCTCAGGAAGCAAAGTACTCACAAGatgttcattaaaaaaaatgatcccAAGGTGAGCACTCCTGAACACGGCTCTCCCGAGAAATCACCAAAAAAGAAACATCCAAAGAAATGCTCGACTGAACAGCCCATGAAGAACACTTTTAAGCAGAGTTCTCCCGAACAGAGCTCTCGCGAGAAATGTCCAAAGAAGCTACATCCTAAGAATAAAGCAGTCGAACAGGGCTCTCCAAAACAGCAACATCCGAAGAACACAGTTGAACAGGGTTCTCCTGTTATATTTCCAAAGAAGAAACATCCCAGGAAGACTATTTCTGAACAGAGCTCTCTCCAGAAATATCTAAAGAAGAAGCAAGCCAAGAAGAGAACCACTGAGAAACcactgaagaagaagaagaataatatcAAAGTAGTAAGTGTCTTGCCCGAATCGTCCGCCACAGTCGATGTCAATGCAGATGAAGTACAATCGGATAAAACCATTGATTACGATCAGATTGTTACAAACCTTGACAAACAAGATGACCCAGTTACTGTTGTCTCAGGTGACCATCTCGACACAGATAGTGCGGTCGCTACGTGTGTCCGAGACGTCACGGATGAAACAGCTATCCCGTCTGTCCGGGCTATTCCGAACAATAAAGATCATGTACCAACAGATGATGGGGATGAAGAAGATTTTAAGTTACATTATGACGAAAATACAAAAGAAGATCAAGCAAATAGTGATGAAGAGGAGAACTACGATATATGGAAGTTTCTGGAGGGTCCTGTTAAGTCACATGACCAAGCTGTCACTAGTGACAAGGTCCTCGAAGAACCCATAGCTTCGACATCcggaaacaatttattttctccCACGCTACGTATGGCCTCTCCAGAACCTGGGCCAAGTGGCCTGCAGTATCAATTCAGCTCATACGATTCTGATAATGATGAAAAGGTGCACTTCTACAGTGATACAACAATTCATTTAGGAGAACCAGACATAAACGCACAATATCTACGCGAAGTGATGCATCAGACAGCTTTAAACCTTGAGCTTGAACGTACACGAAAGCTTCAAAAGAAAACTTGCGTCGGGGCATCGTTGCGGTCCGCCCAGGACGTTATAAAAGCATCCAAGGAACTATTAGATTCGCGATGCAAAGTCTGTAAACCTTGCGTAAGAATTAACAAACTGCTGAAACTTTCTtcacttgtcaaaacaaaaatagaattaaCTGACGAAAATACCGGACAGGATAATAATACCGACGCTGCAGACTACGAACTCGGAAGACGGGAAGAAGAACACGAAGACAACGAGGAACCTTCGGACCCGACGAAAGTAGACCAAGGTTATCTCTATTTGGATCTACTGCCGAAACAGTCCCGGTTGATAGTTAAAATAGGAACTAACGTCCAACACGGCAGAAGCCTCTTGTCAGTTTGTTTGATACCGAGAAGTAAGTCTGGGAAAATGGAACTGTTTTTACTAGAGGAAAAAGAGAGTATTCTTGATAACCTCATTGAGACTCTCACAATAAGTCAAGAGTCAGAAAATACAGATGTTATAAATGGCAATGCAGCCACTGTACGTGACAATTTAGAGACTagaaatgacaatactgaaggtCGAATGGATAGGTCCTATCCTCGAAGCAACATTCTAGTGGGTCGCACGCTGAGCATATCATCAGATTCAGATCTCAGTGATAGTGGCATTattcttgaacaaaataaaccaAACCGCGTTGTTCAGCATCACAAAATGATGGCTGCTAAGAGACGGTTAGCCAAGGCAAAGATGATGCAAGACCACATCagacaagaaaaagaaaaagagatTGCACAAATAGAAGAACAAAAACGCAAAGAAATATCTCGGATTATGGCTGAGAAGAATATGTGCGAGGCAGAGATATCCCGCTACCAGGAAAGATTTTCATCAATGCAGCAGGAGAAAGAAAGAGAGTTTGCTCGTCTTAAAATGGTGATCAGAGAAAAGGTGCGGGAAGAGATGGAGGCTGATCGCAGTATGATCGCCGAAGTCGACGATATGGCGAAGCTCCTCGAAAATGAAAGGGATGCCAAGAATATGAACCCGGAAGACTTTAATGACGATTTTGAACAGCCCAGCTGCAGCGGCTTGGTGCCGATGGAAGGTGGGGTGCTGGTTGATGCACCTGTGTACCATCCTACTTTAGAGGAATTTGCTgatcCCCTTATTTTCTATGAGAAGATCTGGCCTGAAGCAGTTCGTTTTGGAATCTGTAAGATAGTGCCCCCTCTTGGTTGGAATCCGCCACCCCATAAAGTACATGATGATATGAGGTTTGACGTCACGAACCAGTATATATCGCGACTGTTCAGCCGCTGGGGACCGGCCGCAAGAGAACTTTGTGCGATAAAGTTGTGCCTCCAGCAGCAAAAAATTGTAGTTACAAAATTACCCTGTCTGGATGGTGTTGAAGTAAATTTGCCAAAATTATACCACCTCGTGCAACGTCACGGAGGTCTTGAAACTGTTATAAACAAGAAGCGATGGGGAAGAGTCGCAGAAGATATGAAATTTACTAGAGGACCAATTACCGAGAGGAGATTGGATCAAATTTATGTCAAATTTCTCCTACCATATGACACCCTTTCTCATCAGGAGCGCCAAGAAATAATGGCAAAGGTAGAAATGGCATGGCACCGTAAAAATCAAAAGCTTTTAGACCGTGCCATGAACCCACTGTACCGCCAGAAGCGAATGCTTGGCCTACAGGAAGAATCTGAGGAAGAGACAGAAGACCCAGACACGATGGTGGCTCTCAAAGAGTCGGAGGACTGCATCATCAAGGGTGCCGTGACGACCCTAGCTAAATTTAAAAAGGTTGCCACCATGACGTACGAGAACACATTTGGACAAGGGTCAGAGAGTGGCACCGCTCCTAACTTAAAAGATGTCGAGGAGGAATACTGGCGCCTCGTGACGCATGGCGCCGAGCATACGTGCGTGAACTCTGCAGCCATTGACACCGGCGAAGAAGGCTACggcttcacaaaaaataagaatgagCCTTACGGGCTCCACCCATGGAATCCCAAGATGGTTAGCCAGAATCCTCGCAACGTACTCTCCTACTTAGATGCAATAATTGGCCTCACAATACCCACGCTTCTGCTGGGTATGTTATATTCGACATCATGCTGGCACAAGGATCCACACGCAATAGCTTGGATAGAATATCAGCACGAAGGACCTGCCAGAATATGGTAA
- Protein Sequence
- MYVIIYDVCDFRARSRRVQAQRKFAQGAYVPPNVAVAAPADNRRDAAQDPSNVTRNHMTASNLLDVVSLQSMHYHLTSQPVVLVERLLGRQTARVESPPSSRDSSQPGLSECQDESFQPIPVEGPRLRTAKKAKEYKRVHTMSLRSRRLNKIQLNKLIAENSLSPRKVTFKRKRHSSDEDEPLIFQKNKNKKTSSKFTLKQVAARESHPLVGILKQSTPLMNMTRQYTPKVPLSSVKQSVLRKQSTHKMFIKKNDPKVSTPEHGSPEKSPKKKHPKKCSTEQPMKNTFKQSSPEQSSREKCPKKLHPKNKAVEQGSPKQQHPKNTVEQGSPVIFPKKKHPRKTISEQSSLQKYLKKKQAKKRTTEKPLKKKKNNIKVVSVLPESSATVDVNADEVQSDKTIDYDQIVTNLDKQDDPVTVVSGDHLDTDSAVATCVRDVTDETAIPSVRAIPNNKDHVPTDDGDEEDFKLHYDENTKEDQANSDEEENYDIWKFLEGPVKSHDQAVTSDKVLEEPIASTSGNNLFSPTLRMASPEPGPSGLQYQFSSYDSDNDEKVHFYSDTTIHLGEPDINAQYLREVMHQTALNLELERTRKLQKKTCVGASLRSAQDVIKASKELLDSRCKVCKPCVRINKLLKLSSLVKTKIELTDENTGQDNNTDAADYELGRREEEHEDNEEPSDPTKVDQGYLYLDLLPKQSRLIVKIGTNVQHGRSLLSVCLIPRSKSGKMELFLLEEKESILDNLIETLTISQESENTDVINGNAATVRDNLETRNDNTEGRMDRSYPRSNILVGRTLSISSDSDLSDSGIILEQNKPNRVVQHHKMMAAKRRLAKAKMMQDHIRQEKEKEIAQIEEQKRKEISRIMAEKNMCEAEISRYQERFSSMQQEKEREFARLKMVIREKVREEMEADRSMIAEVDDMAKLLENERDAKNMNPEDFNDDFEQPSCSGLVPMEGGVLVDAPVYHPTLEEFADPLIFYEKIWPEAVRFGICKIVPPLGWNPPPHKVHDDMRFDVTNQYISRLFSRWGPAARELCAIKLCLQQQKIVVTKLPCLDGVEVNLPKLYHLVQRHGGLETVINKKRWGRVAEDMKFTRGPITERRLDQIYVKFLLPYDTLSHQERQEIMAKVEMAWHRKNQKLLDRAMNPLYRQKRMLGLQEESEEETEDPDTMVALKESEDCIIKGAVTTLAKFKKVATMTYENTFGQGSESGTAPNLKDVEEEYWRLVTHGAEHTCVNSAAIDTGEEGYGFTKNKNEPYGLHPWNPKMVSQNPRNVLSYLDAIIGLTIPTLLLGMLYSTSCWHKDPHAIAWIEYQHEGPARIW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00042416; iTF_00043263;
- 90% Identity
- -
- 80% Identity
- -