Basic Information

Insect: Agrotis puta
Gene Symbol: -
Assembly: GCA_943137145.2
Location: CALPBO020000483.1:286406-296259[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.3 1.5e+02 3.4 1.2 1 23 216 239 216 239 0.87

2 15 5.5 3.7e+02 2.2 0.2 3 10 278 285 277 289 0.91

3 15 0.0038 0.25 12.1 0.6 1 23 331 354 331 354 0.95

4 15 0.0017 0.12 13.2 1.5 2 23 392 414 391 414 0.96

5 15 5 3.4e+02 2.3 5.0 1 23 418 440 418 440 0.96

6 15 0.29 19 6.2 1.9 1 20 670 688 670 690 0.91

7 15 0.5 34 5.5 2.3 1 23 703 725 703 725 0.92

8 15 0.075 5 8.1 1.6 2 23 731 752 730 752 0.97

9 15 0.97 65 4.5 1.8 1 22 775 795 775 796 0.73

10 15 0.011 0.71 10.7 0.2 2 23 873 894 872 894 0.96

11 15 4.8e-07 3.2e-05 24.4 2.7 1 23 900 922 900 922 0.99

12 15 6.3e-05 0.0042 17.7 0.4 3 23 929 949 927 949 0.96

13 15 0.00018 0.012 16.3 1.3 2 23 956 978 955 978 0.96

14 15 0.26 17 6.4 0.2 1 20 985 1004 985 1008 0.94

15 15 0.00099 0.066 14.0 0.8 3 23 1017 1038 1016 1038 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.3	1.5e+02	3.4	1.2	1	23	216	239	216	239	0.87
2	15	5.5	3.7e+02	2.2	0.2	3	10	278	285	277	289	0.91
3	15	0.0038	0.25	12.1	0.6	1	23	331	354	331	354	0.95
4	15	0.0017	0.12	13.2	1.5	2	23	392	414	391	414	0.96
5	15	5	3.4e+02	2.3	5.0	1	23	418	440	418	440	0.96
6	15	0.29	19	6.2	1.9	1	20	670	688	670	690	0.91
7	15	0.5	34	5.5	2.3	1	23	703	725	703	725	0.92
8	15	0.075	5	8.1	1.6	2	23	731	752	730	752	0.97
9	15	0.97	65	4.5	1.8	1	22	775	795	775	796	0.73
10	15	0.011	0.71	10.7	0.2	2	23	873	894	872	894	0.96
11	15	4.8e-07	3.2e-05	24.4	2.7	1	23	900	922	900	922	0.99
12	15	6.3e-05	0.0042	17.7	0.4	3	23	929	949	927	949	0.96
13	15	0.00018	0.012	16.3	1.3	2	23	956	978	955	978	0.96
14	15	0.26	17	6.4	0.2	1	20	985	1004	985	1008	0.94
15	15	0.00099	0.066	14.0	0.8	3	23	1017	1038	1016	1038	0.95

Sequence Information

Coding Sequence: ATGGCGGATACATCGAGGAAAAGGTCGAGAAAATCGAAGTTAGTGCCTCGAGAGTGTTCTTTGTACGAAGATGATCTTGAATTGCAGCTTCCAGAGTCAATAGTATTCAGAACAACTATTACCCCACAGCAACCTAGCAGTAAACAAAAAACAGTCAACAAGCCAGTTAAAGCACCAGAAAGTACAATTACAAAACCAATAGATACTAAACTACAAGAAGTAGACACAAGCGTCTTGAGGAAAATCAACGACTCTGCTAAAGAAGATGTTGAACCAAAAATGAAGATATCACCAAGAAAATTCGAAATTAACATAGAAGTAGAATCTTGTGATGATGATGATGATGAATTTGCAAGCATTAGAATTGAAAATAGCTTGACCACACCAGATGAAGATATACTAAGTGCACCACGTACAAAACCTATACCTCTTTCTCGAGAACGCATACTTGAAGCTACAGACAACATACTTGAAACTTCTACAGAAGCTGCTGATAGAATCTTAAGCTTATACGTAAGAAATACTATAGGAGAGGAGCAGGAAGAAAAATTAAAGACAAGCGGACATGAGATCAAAATCCAGCGAGCTTTAGAAGATTGGAGAGACTGGCAATACCGCAGTTTCCACCGAGAAGACCCTTTATTCTACAAATGCTACATTTGTACAAAATCCTGGTGGTTTTTATCAGATTTTCGTAACCATCTGTCTTCGCAACACCCTAATGATGCAGAAATCAAAATTATTATGGAAATATATGAATCCCATGAAGTAAATTTGATAGCGTATGAAAGTAAACTTGTTGTGATCAAAGACATATATACTGAAGGCCTTTGCCACCGCTGCGGCAAAGACTTTGCTGCTCACGAGTTAGGAGGGAGAATTCAAGAGAAATTTTACAACAATAAAGGATGTTATAAACAGTTTTATAGCTGTATGGGTCTAAGAGATCACCTCCCATCCTGTCCCGTTTGTAACGTAGAAAATAAGCCGTTCAAATGTGATATTTGCAAGTCAAGATTTGATACTGTATATGAATTGAATGATCACTTGGTTCGGTCCCACTCAGTTCGGTCCGATATTCCTATAATGGGTCACTACGATATTTGCTATAAGTGTTCGGAGAAATATTCTTCTAAATATCTGCATAAATGCTTACAAATGGGACCACATAGTGAATGCCCCAACTGCTTTAGGACTTTCTCAAATACCAAATCGATGGAACTCCATTTGAAACGTTCACATAATAAACCATACAAATGTGAAATTTGCAATACATTTATGAAATATAGCTGTAGTAAGTACAAGCATATGTTGGAACATACGGATAGATACATTATTGTAAGGAAATGTGTTAAATGTGATGGCTTGAATGTATTTCTGAATAATGATGATGCTGCAGCTCATAATGACTTGAAACATGAGCCAAAGGATACGGTGGAACAGATATATTTTCCTAAAATTCTTGTACCCTCATCTTGCGTATATCAGAGCTTAGCTGAATCTGAAATGGAGGAAGAGGAGTCATTAGTTGAGGAAGAAGAATTAGTGCTAGAGGGCAAAGAGTTGAAGCCATCGTCTGAACTGCAAATATCTACGGCAGAATTAATGATGAATAATGTTGTAGTCAAAGAAGAACCGCCGGAAACAGAAGACCTAGTAATCAAAGAAGAACCGATAGAAGAAACAGAGAACCAAACAGAAGAACAGCAAATGGACAACTTTGACCACGAGATAAACGTAAAAGAAGAAGTTTTAGAAGAAGAGGTAGATGAAGATGAAGATGATTTAATAAAATTAAACTTTGATATAGAAGACTTGTTGGTGAAGCAAGAAAATATGGATGATGAGACCGAATATTCACAAGACACATCAGAAATGCAAACAGATGATGATGATTCCCAAGAATTCCCTCAACCGATCAAAGAAGAAGGTGATGGTGATGTCACCTCAATACTAGAACCTCATATAATAATACTAGGCGGTGATAAAAAGAAGAAGAAAAATTTATATAAATGCACCAAATGTGGTTTCACATCGAATCATAGACAGTACAGAGCTCATATAGAATTTGATTGTCCCAAAAGTATAATGAAACGCAATAAACATTATTTGTGTACAAAATGTAACAGTACATTTAAGTCTATGAAGAAATATTTGGCGCATTTTGAACTTCATGGTTACAAACATAAATCTTGCCCTGATTGTTTGCATGAATTTGATAACTATAACGCCTTGGGGCATCATGTACAGACGCATATTAAACATAATTTCGTGCGCATCAAAATGATTACACATGCAGGCAAAGCGATGATAAAACCGGACTTTCAGTGTAAGAAATGTAACAAAACAATATCATTCACTGGATTCTTTGAGCACTGGGAGTCTCACATCAATGCTCAACCCACTCACCCGATGAAGGTCAGGTCTGGGCCTTCGCTGCGAAGGGGAGAACTACAACAAACTATCATAAAAGAATGCATTGCTCGCCTATCTAAAAACCCAAAAGAATGCAACCACTGTCACCGCTGGTTCAAGAGAGTGAACGAATGCAAACGGCACATCATAGAACATCTCCTGGCAGATGCTTACAACCAGAAGCACGTACTCCAGGAATTGAGATGCCAGATCTGTGAAGCCGGATTCCCCATCCAGGAGAAATATAAGCAACACATGAGAGACCATGCGTCATTGCCTGTGTATAAGTGTGAACTTTGTGATAGAACATTCAGTGATTCAAGTAATTTTACTAAACATAAAAAAGTGCATAATTTAAAAGTGATCATTTGTGATTTGTGCGGAAAGAAGTTTCAGTCGAAGATGTCTTTGGCGAAACATATTGAGAAACACCAAAGCACCGCTCCAATAACATGTGAGCTATGCAACAAGATCTTCTATTTCGAGAGCTCCTACCGTCGCCACATCAGATACTTCCACGAAAAAACTACCCATGGGTTTCGCTGCATGAACTGCGGTGCACGTTTTGAAAGCTTAAAACAAAAATGGGACCATATGTGGCTGGTGCATAAGGAGAGAAAACAAAAAGCTGACTGCCCTATATGCCATGAGTCTTTTAGAAAGTTCTCCGATGTGAGGGCTCATGCACGAGCAAAGCATTATATGGAAGTGTCCGTGCTGAGTGTGAAACGAGCTAGCGGACCCAATACTACGGTCATTGATAAGTTTTTGGGCGAGACTGCTAAGATTAAGGTTGGTAAGACGGAAACTTTGATCATTTATGATGCTGATGGATAG
Protein Sequence: MADTSRKRSRKSKLVPRECSLYEDDLELQLPESIVFRTTITPQQPSSKQKTVNKPVKAPESTITKPIDTKLQEVDTSVLRKINDSAKEDVEPKMKISPRKFEINIEVESCDDDDDEFASIRIENSLTTPDEDILSAPRTKPIPLSRERILEATDNILETSTEAADRILSLYVRNTIGEEQEEKLKTSGHEIKIQRALEDWRDWQYRSFHREDPLFYKCYICTKSWWFLSDFRNHLSSQHPNDAEIKIIMEIYESHEVNLIAYESKLVVIKDIYTEGLCHRCGKDFAAHELGGRIQEKFYNNKGCYKQFYSCMGLRDHLPSCPVCNVENKPFKCDICKSRFDTVYELNDHLVRSHSVRSDIPIMGHYDICYKCSEKYSSKYLHKCLQMGPHSECPNCFRTFSNTKSMELHLKRSHNKPYKCEICNTFMKYSCSKYKHMLEHTDRYIIVRKCVKCDGLNVFLNNDDAAAHNDLKHEPKDTVEQIYFPKILVPSSCVYQSLAESEMEEEESLVEEEELVLEGKELKPSSELQISTAELMMNNVVVKEEPPETEDLVIKEEPIEETENQTEEQQMDNFDHEINVKEEVLEEEVDEDEDDLIKLNFDIEDLLVKQENMDDETEYSQDTSEMQTDDDDSQEFPQPIKEEGDGDVTSILEPHIIILGGDKKKKKNLYKCTKCGFTSNHRQYRAHIEFDCPKSIMKRNKHYLCTKCNSTFKSMKKYLAHFELHGYKHKSCPDCLHEFDNYNALGHHVQTHIKHNFVRIKMITHAGKAMIKPDFQCKKCNKTISFTGFFEHWESHINAQPTHPMKVRSGPSLRRGELQQTIIKECIARLSKNPKECNHCHRWFKRVNECKRHIIEHLLADAYNQKHVLQELRCQICEAGFPIQEKYKQHMRDHASLPVYKCELCDRTFSDSSNFTKHKKVHNLKVIICDLCGKKFQSKMSLAKHIEKHQSTAPITCELCNKIFYFESSYRRHIRYFHEKTTHGFRCMNCGARFESLKQKWDHMWLVHKERKQKADCPICHESFRKFSDVRAHARAKHYMEVSVLSVKRASGPNTTVIDKFLGETAKIKVGKTETLIIYDADG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00043957;
90% Identity: -
80% Identity: -