Basic Information

Insect: Agrotis puta
Gene Symbol: -
Assembly: GCA_943137145.2
Location: CALPBO020000183.1:1816271-1825139[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00039 0.026 15.2 0.2 2 23 142 163 141 163 0.93

2 10 0.00056 0.038 14.7 2.4 1 23 169 191 169 191 0.96

3 10 6.4e-05 0.0043 17.7 0.3 1 23 277 299 277 299 0.98

4 10 0.00059 0.039 14.7 0.0 3 23 378 399 376 399 0.90

5 10 0.00019 0.012 16.2 0.1 1 23 414 436 414 436 0.97

6 10 4.5e-05 0.003 18.2 0.2 1 23 469 491 469 491 0.98

7 10 0.0006 0.04 14.6 0.2 1 23 497 519 497 519 0.97

8 10 0.00034 0.023 15.4 0.3 1 23 525 547 525 548 0.95

9 10 0.0091 0.61 10.9 1.1 1 23 561 583 561 583 0.96

10 10 0.006 0.4 11.5 0.1 1 20 736 755 736 758 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00039	0.026	15.2	0.2	2	23	142	163	141	163	0.93
2	10	0.00056	0.038	14.7	2.4	1	23	169	191	169	191	0.96
3	10	6.4e-05	0.0043	17.7	0.3	1	23	277	299	277	299	0.98
4	10	0.00059	0.039	14.7	0.0	3	23	378	399	376	399	0.90
5	10	0.00019	0.012	16.2	0.1	1	23	414	436	414	436	0.97
6	10	4.5e-05	0.003	18.2	0.2	1	23	469	491	469	491	0.98
7	10	0.0006	0.04	14.6	0.2	1	23	497	519	497	519	0.97
8	10	0.00034	0.023	15.4	0.3	1	23	525	547	525	548	0.95
9	10	0.0091	0.61	10.9	1.1	1	23	561	583	561	583	0.96
10	10	0.006	0.4	11.5	0.1	1	20	736	755	736	758	0.93

Sequence Information

Coding Sequence: ATGGAGGGGGAAGCTGAAGACTTCAACCTCCAATGGGAGGAAGAAGTTGAAGTGAAGCACAGTCCAGGTGCTGTTGAGGCAGAGGAAGTGATAACAGGTCTAGATAATGTGCAGCACACTGGATATTCCAATATGACAGCAGAAGAGATGATGAGCACAGACCAAATGGCTGCAGAGAACTTAATGTTCTTATCTCAAGATGTAGTGAGCTACACAGAGACAGCCGAACTGGCTGATGACCCTAGCGTGGAGTGTGTCACAGAAGAGGTCATTACTGACGATTGGGTGACTCCTGGTGGGCAGGAAAGAGTGGAAGTTCCAATAGATCATCTGAATAATGCAGAAGTGGTTATGAAAGAAGAAAATGATCTTGATGTTCCTTTACCAACAGATCAAGATGAATACACAGCTATGCGTCCTTGGCCGTGCGACTTCTGTTCGCGACGGTTCCGCAAGAAGGCCGCACTCATGAACCATATGGTGGCTCACCAGAACGACCGGCCGCACGCCTGCAACCTGTGCGGCGTGCGCTACGTGCGCAAGTGCGACCTCATGAACCATCTCAAGGTCCACGCTTTTGTGCCTGAGAACACCGATTCTATAGATTTTGAGGATGTTTTAGACAATAACCAAATTGTGAAACCAAAGAAGAAACGCGGTCGGCGGAAAAAGAATCCTGAACCGGTAGAGGAAGAGAACGGCATGTGGGAGAACATGACGTCTGCGCGCACGCAGCAGTGGTCGCGGCGCGCGCGCTCCCCGCGGCCGCCCCCCTCCCCGCCCGCGCCGCCCTCCCCCCCGCCCGCGCCCAGCGACCCCACGCGGCCCTTCGTGTGCCGCCACTGCGGGGTGGGCTTCGCCAGGGAGAAGGCGCTGCAGTCACATGCCAGGGTGCACGGCGGTGACTCCCCCGTGGAGTGCGGCTCGTGCGGCGAGCTGTGCTGGTCGCGGGAGGCGCTGGCGGCGCACGCGCAGCAGCGGCACCCGCACCTGCCGCCCAGGGACCAGGCGCCAGACCCGCCCTACGAGGACGACGACTCGGGAGATGACATGGAGTTCCGTCTGTCCCCGCTGTCGCACGGGCCCCCCGAGCGGGCCGTGTACGACACCATGCGCGGGCCCGAGCTGTTCTGTCAGGACTGCGGCGTGGCCTTCCAGCGAGCGGACCTGCTGCGGAGACACGTGGCCGCCGCACACAGTTACAAGCGACACGACAGCTCGAGCAGCACCTGGGCGGAGCACACGTGCGACGTGTGCGGCGAGGGGTTCACTGACGCACTGCAGCTGCTGGCGCACGCTGAGACACACGTGGCCGAGAGACACCGCGCGCCGCACAACGTGCCCAGGTTAAAAAAAATAGGCAGAGGTCGGAATAATACGTCATCATCGAATAATTCTCGGCAGTTCCCTTGTCGAGTATGTGGCAAGGTGTTCGGGTCGCGCAGCTCGCAACAGATCCACGTGCGCATCCACACGGGAGAGCGACCGTACGCGTGCCGCTTCTGTTGGAAGGCCTTCGCGGACGGAGGGACGCTGCGGAAGCACGAGAGGATACACACAGGCGAGAAACCGTACGCATGCGCGGTGTGTCCGCGCGCGTTCAACCAGCGCGTCGTACTACGTGAACATGTGCGCTCACATCACTCCGCTCCCGACAGGCGCGCTAACGGTGGTCCGGCCTACTGTTGTGTAGTGTGTGGTCGCACGCTACACTCGAGTGCAGAGCTAGTGCAGCATCTTATACAACACTGTGACGCTAACACGGCGCTCAAGAGACAACCCCAGACGGGGCCGCGCAAATACAAAAGAAGACGGAAATTGAAGACAGAGCAGTCCCCCCCGCGCGACTGGGAGCGCCCCTCCCCCTCCCCTCCTCCCGTGTCGCGCTCCCCCTCCCCCGCGTCCGACACGCTGCCCCTGTCGCCCGCGTCCCCGCCCTCCCCCGCGTCGCCCCCGTCCCCCGCGCGCCGCCGCCGCCGCCGCCGCGCCCCCTCCCCCCCGCCCCGGCCGCGCATGATCCACACGGAGGCGCGGCGCGGCAGCCCCGCCCCGCGCCGGCGCCGCGGCCCCGCCCGCTCGGCCTCGCCCCCCTCCCCCGCCGCGCGCCCCGCCCGGCCGCGCCGCCCGCCCCGCCGCCCGGCCGACGACCTGCGCGCCATCCGTCCGAAGGACGAGCCCGAGCCGGACACAGACCTGGGCGGGCCCTACAAGTGTGAGATGTGCTCGCTAGAGTTCCCGCGGCGGGACGCGCTGCTGCTGCACGTGCCGGTACACATCTGA
Protein Sequence: MEGEAEDFNLQWEEEVEVKHSPGAVEAEEVITGLDNVQHTGYSNMTAEEMMSTDQMAAENLMFLSQDVVSYTETAELADDPSVECVTEEVITDDWVTPGGQERVEVPIDHLNNAEVVMKEENDLDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPENTDSIDFEDVLDNNQIVKPKKKRGRRKKNPEPVEEENGMWENMTSARTQQWSRRARSPRPPPSPPAPPSPPPAPSDPTRPFVCRHCGVGFAREKALQSHARVHGGDSPVECGSCGELCWSREALAAHAQQRHPHLPPRDQAPDPPYEDDDSGDDMEFRLSPLSHGPPERAVYDTMRGPELFCQDCGVAFQRADLLRRHVAAAHSYKRHDSSSSTWAEHTCDVCGEGFTDALQLLAHAETHVAERHRAPHNVPRLKKIGRGRNNTSSSNNSRQFPCRVCGKVFGSRSSQQIHVRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPAYCCVVCGRTLHSSAELVQHLIQHCDANTALKRQPQTGPRKYKRRRKLKTEQSPPRDWERPSPSPPPVSRSPSPASDTLPLSPASPPSPASPPSPARRRRRRRAPSPPPRPRMIHTEARRGSPAPRRRRGPARSASPPSPAARPARPRRPPRRPADDLRAIRPKDEPEPDTDLGGPYKCEMCSLEFPRRDALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01064911;
90% Identity: iTF_00040144; iTF_00043803;
80% Identity: -