Aexc014357.1
Basic Information
- Insect
- Agrotis exclamationis
- Gene Symbol
- -
- Assembly
- GCA_950005045.1
- Location
- OX465421.1:7374322-7375128[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-08 1.6e-05 26.0 0.0 4 40 18 55 16 60 0.91
Sequence Information
- Coding Sequence
- ATGCCACGAACATATGTGAGAAAGTCAAATAGGCTGCAGTGGTCGGCGTCAGACATGCTTTTAGCCATAAATTCAGTGCTGGAGGGCAGAATGGGATATTTTTTAGCGTCACACACATATAGTGTACCCAAAAGTTCCTTAGAAGATCGTGTAAAGAAGATCAAGGCTGGAAAATCCAAAGACGAAGTGTTTCGAAAGTGCCCTGCTACTGCAAAATGCGTCTTCACTGATGAGCTGGAAGGTATGCTAGTTGAACATATCAAAACTATGGAATCTCGACTATTTGGATTGACTAAAACAGATCTGCGACTTTTAGCATTTCAATTGGCTGAAAGAAATAATTTGAACCATCCTTTTAATAAGGAAACTGGACTCGCTGGCTTAGATTGGGTTAGTGGATTTCTAAAACGACATTCTGAATTGTCACTAAGATCACCTGAAGCTACATCAGCTGCAAGAGCAATGGGCTTTAATAGAGCTGTAGTGTCATCGTTTTTTAATCTTTTAGATACACTTTATGCTAAGCACGCTTTCAATTCCACGCGAATTTATAACATGGACGAGACTGGATTGACCTCTGTaccaaaaaaaataggtaaaattatatcgttcaaaggtaaaaaacaagTTGGTGCCCTAGCTTCAGCTGAACGGGGACAGTTGGTAACGGCGGTGCTTTGCTTTTCTGCAGCTGGACATTATGTTCCACCTCTTGTGATTTTTCCTCGCGTACGAATGAAGAGTGAGCTTTTGGATGGTGCACCACCAGGCACAGTAGCTGTATGCCAAGGTGAAAGGTATCGGTAA
- Protein Sequence
- MPRTYVRKSNRLQWSASDMLLAINSVLEGRMGYFLASHTYSVPKSSLEDRVKKIKAGKSKDEVFRKCPATAKCVFTDELEGMLVEHIKTMESRLFGLTKTDLRLLAFQLAERNNLNHPFNKETGLAGLDWVSGFLKRHSELSLRSPEATSAARAMGFNRAVVSSFFNLLDTLYAKHAFNSTRIYNMDETGLTSVPKKIGKIISFKGKKQVGALASAERGQLVTAVLCFSAAGHYVPPLVIFPRVRMKSELLDGAPPGTVAVCQGERYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01564560; iTF_00771864; iTF_00771841; iTF_00771839; iTF_00771840;
- 90% Identity
- iTF_01085138;
- 80% Identity
- -