Aexc029287.1
Basic Information
- Insect
- Agrotis exclamationis
- Gene Symbol
- TIGD6
- Assembly
- GCA_950005045.1
- Location
- OX465431.1:14268884-14270743[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.3e-10 3.9e-07 31.2 0.1 1 42 15 55 15 58 0.87
Sequence Information
- Coding Sequence
- ATGCCGAGAAACCGAAAAAGGACCACCACTAAAGCGGCTTGGACCGAAGAAAACCTTCGATCTGCTAAAGCTGCGATTGAAAGAGGTATGTCTAAAAGAAAAGCCGCAAAACAATATAGCATACCATTTACTACTTTGAGAGATCGACTAAAAACTGAAAACATGAGCAACCCAAGACTAGGTCGCAAGCCCGTTTTCACCCAGCAGCAAGAAACTGAAATTGCTGAACAAGTTAAGTTGCTAGGTTCGCTATACTATGGACTTAATGTCGAGAATTTGCGTAAACTTGTTTATAAATATGCTGAGCTCAACAATATCAAAAACAATTTTGATCGAAGCAGTAAAACAGCTGGATTGGATTGGGTACACGCCTTTATGAGACGAAATCCTTCAGTTACTATACGCAAAGCTGAAGCAACAAGCTTAAATAGAATTTCTGCCTTCAATAAAGAAGAAATAACACATTTCTATGAAAAACTTGGCGACTTAATGGATAAATATAAGTTTATTCCCAACAATATATATAATGCTGACGAAACTGGTATCACCACGGTGACAGACCCAGGAAAAGTGCTCGCCGAAAAAGGACAAAGAAGAGTCGGGTCTGTTACAAGCGGCGAACGAGGAAGTAACACAACAGTTATGTGTGCGATGAGTGCAGCCGGTAACTTCATACCACCCATGTTTATTTTTGCCAGACAGAGAATGACGCCTTTATTAGAAAAAGATGGACCAGCTGGTGCACTATACACCAACTCTAAAAATGGCTGGATAAACGAAGACTTATTTGTCACTTGGCTCAAACATTTCGCAGCATTTGCTAAGCCTTCCCAAAAATCACCTGTGTTGTTAATTCTTGACAATCACAGCAGTCACATTTCCCTTGaagcttttattttttgcaaggAAAACCACATCACAATGCTTTCCATTCCACCACATAGTTCTCACAGAACACAGCCACTGGATGTGTCTTTTTATGGGCCTCTGAAAGCTGCTTATAGGCAAGAATGCAACAGACACATGAAGACACATTTAATGTCTAAAATAACTCCATACGATGTTGCAGGTCTTTTTAATAAGGCATACGTACAAGTTGCTAATATAAGTAAAGCAGAATCTGGATTTCGAGCCACGGGAATTTATCCATTGAACCCAAATGTTTTCAATGATCAAGATTTTCTGCCAGCGTCGCTGATGTCACAACAACTGGAAACAAATGCTGAAAACCAAGACCCAAATGTCCAGAATGTTGAAGATGCACAGTCTTATGTTATGGCCATAATTTCAAGACATACATCTCCTTTGGCAGGTCCATCAAATAGGGATCAATGCTCTGAATATGTTTCGGCAGTTGCTTGTTCCCAAGAACTTGTGGATGGGCACAGAACTCCGGTATCCTTTGCTGCTATAGCAAAAACACCAACTATTGCGCCATCTTCTAAACCAGGTCAAAGAAAGCGAAAACAACATGCTACCATACTAACTGCGACTCCTATGAAAACTGTTTTAGAggataaagaaaagaaaaaagcagCGAAACTCAATAAGATTGGAAAAGTTGTCAAAGAAAAGAACAATAAACAGAATAATAAGAAACAAACTCACAAGAGAAAAATTTTACGAGAAAGTTCTTCAGAGAGTGAAGATGAAGAGCACCTTTGCGACGACAACAGTGATGACGATATGAATGTGGAcgatcaaaattataataaatgcaTAATTTGTGAAGAATTCGGAAAAAATAACGAGTTGTGGTATCGCTGCACCATCTGCGGACTGTGGGCTCATGCCATATGTTCAGGATGGGATTCGCCAGATGGCTACATCTGTGATCATGATTTATGGGCCCAAAAGTAA
- Protein Sequence
- MPRNRKRTTTKAAWTEENLRSAKAAIERGMSKRKAAKQYSIPFTTLRDRLKTENMSNPRLGRKPVFTQQQETEIAEQVKLLGSLYYGLNVENLRKLVYKYAELNNIKNNFDRSSKTAGLDWVHAFMRRNPSVTIRKAEATSLNRISAFNKEEITHFYEKLGDLMDKYKFIPNNIYNADETGITTVTDPGKVLAEKGQRRVGSVTSGERGSNTTVMCAMSAAGNFIPPMFIFARQRMTPLLEKDGPAGALYTNSKNGWINEDLFVTWLKHFAAFAKPSQKSPVLLILDNHSSHISLEAFIFCKENHITMLSIPPHSSHRTQPLDVSFYGPLKAAYRQECNRHMKTHLMSKITPYDVAGLFNKAYVQVANISKAESGFRATGIYPLNPNVFNDQDFLPASLMSQQLETNAENQDPNVQNVEDAQSYVMAIISRHTSPLAGPSNRDQCSEYVSAVACSQELVDGHRTPVSFAAIAKTPTIAPSSKPGQRKRKQHATILTATPMKTVLEDKEKKKAAKLNKIGKVVKEKNNKQNNKKQTHKRKILRESSSESEDEEHLCDDNSDDDMNVDDQNYNKCIICEEFGKNNELWYRCTICGLWAHAICSGWDSPDGYICDHDLWAQK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158766;
- 90% Identity
- iTF_00147383;
- 80% Identity
- -