Basic Information

Insect: Agrotis clavis
Gene Symbol: Znf296
Assembly: GCA_954870645.1
Location: OX940917.1:19839568-19858059[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.73 90 5.3 1.5 1 21 155 175 155 176 0.94

2 14 0.00052 0.064 15.2 0.6 2 20 189 207 188 211 0.95

3 14 0.15 19 7.4 0.1 2 23 251 272 250 272 0.95

4 14 0.41 51 6.0 1.0 2 21 279 298 278 299 0.93

5 14 3.1 3.8e+02 3.3 0.2 2 23 350 372 349 372 0.89

6 14 0.012 1.4 10.9 0.3 1 20 377 396 377 398 0.92

7 14 4.3e-05 0.0053 18.6 0.8 1 23 406 429 406 429 0.98

8 14 0.0001 0.013 17.4 3.4 1 23 450 472 450 472 0.99

9 14 5.1e-06 0.00063 21.5 3.6 1 23 479 501 479 501 0.99

10 14 1.5e-07 1.8e-05 26.3 2.3 3 23 515 535 513 535 0.96

11 14 3.4e-05 0.0042 18.9 3.2 1 23 541 563 541 563 0.99

12 14 2.9e-06 0.00036 22.2 2.6 2 23 570 591 569 591 0.96

13 14 1.7e-07 2.1e-05 26.1 1.4 1 23 597 619 597 619 0.99

14 14 0.0041 0.51 12.3 0.1 1 23 625 647 625 647 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.73	90	5.3	1.5	1	21	155	175	155	176	0.94
2	14	0.00052	0.064	15.2	0.6	2	20	189	207	188	211	0.95
3	14	0.15	19	7.4	0.1	2	23	251	272	250	272	0.95
4	14	0.41	51	6.0	1.0	2	21	279	298	278	299	0.93
5	14	3.1	3.8e+02	3.3	0.2	2	23	350	372	349	372	0.89
6	14	0.012	1.4	10.9	0.3	1	20	377	396	377	398	0.92
7	14	4.3e-05	0.0053	18.6	0.8	1	23	406	429	406	429	0.98
8	14	0.0001	0.013	17.4	3.4	1	23	450	472	450	472	0.99
9	14	5.1e-06	0.00063	21.5	3.6	1	23	479	501	479	501	0.99
10	14	1.5e-07	1.8e-05	26.3	2.3	3	23	515	535	513	535	0.96
11	14	3.4e-05	0.0042	18.9	3.2	1	23	541	563	541	563	0.99
12	14	2.9e-06	0.00036	22.2	2.6	2	23	570	591	569	591	0.96
13	14	1.7e-07	2.1e-05	26.1	1.4	1	23	597	619	597	619	0.99
14	14	0.0041	0.51	12.3	0.1	1	23	625	647	625	647	0.97

Sequence Information

Coding Sequence: ATGGCCTCTACTCTGGAActcgaaataaaaattgaagaattgTGTAGAACATGTTTGTCTAAGGATAGTGAACTAGTTTCGATATTTGATGTATTTCTTGGTTCGACAGTGCCGTTAGATTACATATTAACTTCAACTACAGGTTTAAAGATAAGCAGAAATGATGGTCTACCATCAACAATTTGCTGTGACTGCAAAGAGAAAGCTTCAAAGGCATATGAGTTCAAGAAAAAATCAGAGGAGGCTAATATGTCTCTTAGAgggatattattaaaaaaagaaaagaaagaaagcacAATATCAATAAGCATCATAGGTCAAACCAATTCTTCAGCTGTGAAGACTGAAGATTTCTCATCACATGACAATGATGAGTATGCCGACAGTGATTTTAATGATCCAGACTTACATGAACAGGAACATGTTAAGATTGAGCATGAGAGCTCAGAACGCAAGTCATGTTATGTGTGCAAGAGCTGCTTAGTTGTTTTCGATACACACTGTAAATTGCAAGAACATGAGAAGATATGCATAAAGGttgagTGTGATGAAACCAACCGTACTTACTGCCCACTTTGCGGTACATGCTACAATGGTGCGGAGAACTTAACGAAACATATGTGGGAGAATCATGCAGACCTTATGGGCCCAAAAAAGAGAGGCAGACCTAAGAAGATGTTAACTAGTACTATTCTTAACAAGTTATCAGAAAATGGATTTTGCATAACATCAATGCCTGCTAAAAAGATTGAGTGCGCATTTTGCAAGCAACTTTTTGAAACCAAAGAAGAATTAGGATCACATGCTGCAACTCATAAAGataCGAAAGTGCTACGTTGTGTGTTGTGCAAGAAAATATACCTCGATAAGAAAAATTTTGAACAACATATCTGTATTGAAGAGAAAGATGATATAAACAATGTAGAAAATGATTCAGCTAATACAGAAACAAGGCATGCAAAAAGGCCTCAAAACTATCCATCAGAAATAACATTGCGAGAATTGCTTGACCCGAATCTGGATATGGACAACATCAACTTGCTCATAGTTTGTAGTACTTGCAACTGCATATTGCAATCGGAAGGGGAGCTCATTAGCCATCGGGATGCTGAGCACCCGGAACTATCTCACCGATGCAACCTCTGCACAAAGGTGTTTGCTTCATTGCGGTCAGCAGCACGCCATAGAAGCATTTGCAAGCAAAttgaaagaaaatataaatgtaatacctGTGGCTTGAAATTTGCTTAtgaaatatctttaaataagCATATTCTACGATATCATGAAGGACAAAGCGTATCGGTTAAATTTATTGATTCTAAAACCAAACGAGAAGAGAGACAGTATCAGTGTGATACTTGTAATAGAATTTTCTGCAAGAGGGATTTACTAGTAAAACATACTAAAATACACATGCCAATCGAGAACTTCTACCAATGCGATGTTTGTGAAAAGAAGTTTCACAGAAGTGACAATCTCCGTTCTCACAAACGAATTCATCAGCCGCAGCGCGAAAAGACTTCGTCTAGTAACTGCTTATGCCTTTACTGTGGCCGCAGTTTCTCGAACTCGTCGAACTTAATCGTACACATGCGCCGCCACACCGGAGAGAAGCCCTACAAGTGTGATTTTTGTGGCAAAGGTTTTCCAAGATCTTCGGATCTTCAGTGTCACCGGAGATCTCATACTGGAGAAAAACCATGCATATGCCGTGTTTGTGGTAAAGGTTTTTCGCGGAGCAATAAGTTGTCTCGACACATGCGAGTCCACACTGGCCAGCGTCCATACAAGTGCACGTACTGCGAGAAAGCGTTCTCGCAGAGCAACGATCTCAACCTGCACATCCGTCGACACACTGGCGACCGGCCTTATATTTGCGAAGTATGCGGCGACAGATTTATACAGGGTACCGCGTTGCAGAATCATCGACGAGCTCATGGTCATTTTCCTGCTCCTCCCACTACCGAGGCTCCTACCGAAGTACAAGCACTGACTTTTACAGTCCAGAGCATAAGCCAGAATAATAGTCATtaa
Protein Sequence: MASTLELEIKIEELCRTCLSKDSELVSIFDVFLGSTVPLDYILTSTTGLKISRNDGLPSTICCDCKEKASKAYEFKKKSEEANMSLRGILLKKEKKESTISISIIGQTNSSAVKTEDFSSHDNDEYADSDFNDPDLHEQEHVKIEHESSERKSCYVCKSCLVVFDTHCKLQEHEKICIKVECDETNRTYCPLCGTCYNGAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECAFCKQLFETKEELGSHAATHKDTKVLRCVLCKKIYLDKKNFEQHICIEEKDDINNVENDSANTETRHAKRPQNYPSEITLRELLDPNLDMDNINLLIVCSTCNCILQSEGELISHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKQIERKYKCNTCGLKFAYEISLNKHILRYHEGQSVSVKFIDSKTKREERQYQCDTCNRIFCKRDLLVKHTKIHMPIENFYQCDVCEKKFHRSDNLRSHKRIHQPQREKTSSSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPAPPTTEAPTEVQALTFTVQSISQNNSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00072259;
90% Identity: iTF_00041994;
80% Identity: -