Acla041757.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrotis clavis
Gene Symbol
-
Assembly
GCA_954870645.1
Location
OX940944.1:3720610-3722949[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.0014 3.6 9.1 0.6 18 43 9 31 5 32 0.93
2 21 0.024 63 5.1 0.2 17 44 36 60 33 60 0.86
3 21 0.00068 1.8 10.1 0.1 18 43 68 90 63 91 0.87
4 21 8e-05 0.21 13.1 1.8 17 44 98 122 95 122 0.91
5 21 0.0003 0.8 11.2 1.5 18 44 129 152 127 152 0.94
6 21 9e-05 0.24 12.9 1.0 15 43 157 182 153 183 0.88
7 21 0.0025 6.5 8.3 0.3 17 44 188 212 184 212 0.90
8 21 0.005 13 7.3 0.5 18 43 220 242 214 243 0.82
9 21 0.25 6.7e+02 1.9 0.0 19 44 256 278 245 278 0.81
10 21 0.26 6.9e+02 1.8 0.4 15 43 300 325 284 326 0.75
11 21 3 8.1e+03 -1.6 0.3 18 32 333 346 330 351 0.77
12 21 0.45 1.2e+03 1.1 0.0 15 27 359 371 355 385 0.80
13 21 0.13 3.4e+02 2.8 2.4 14 43 403 429 396 430 0.79
14 21 0.0046 12 7.4 4.7 3 29 421 447 419 459 0.81
15 21 0.0002 0.53 11.8 2.8 6 43 453 487 450 488 0.83
16 21 0.05 1.3e+02 4.1 0.8 17 44 493 517 489 517 0.85
17 21 0.37 9.9e+02 1.3 0.8 18 28 524 534 520 547 0.82
18 21 2.1 5.5e+03 -1.1 0.8 19 43 555 576 550 577 0.75
19 21 9.6 2.5e+04 -3.2 0.1 14 28 580 594 578 596 0.78
20 21 6.9e-05 0.18 13.3 1.6 6 43 606 642 604 643 0.78
21 21 0.37 9.8e+02 1.3 0.2 13 40 658 687 650 701 0.85

Sequence Information

Coding Sequence
ATGTACACAAACCAGCTAGATTTCGTCTGTGATTACTGCTCAAGAACTTTCACGAGGAAATACAACTTGCAGACTCATATCGAAAACTGTCATGTAAATTCTTCATGCCGTTGTGATATATGTGGACAGAATTTTGGCAGTCCAGCTGGGTTGTTACAGCATTTATCCCGGGGCCACAACAACTACAGTCAACCCTTCCCAGAATGCGAGTTATGCGGTCGAATTTTCACCAGGAAACAGAACATCACTTCTCATATGATAACAGTGCATTTGCAAGGTTTGGGATACGAAATCCGCTGCCGATTATGCGATAAAACTTTCACTACTAAACGGAATTTGAAAAGACATATAAATCAACTACATAATCCTGATGTGGAGTACCCTACCTGTAATGATTGCCATAAGATTTTTAAAGGAAAGCATTCGCTTATAGCGCATATACAATCAGTTCATAATGTGAGTGAGAAAGATGCTATCAAATGCCATTTGTGCGAAAAAGTCTATACTAACAATAGAAACTTGAAAAGGCATGTAGAAATGTTCCATGGTGTTAAGGGAGAGTTTAGATGCGATATCTGTCCTAAAGTTTACACTTCGAATCAGAGTTTGCGGCGCCACGCCCGAACGAGGCATAGCACGGAAAACCAGGATCATTTAACGTGTAATTTTTGCATGAAAGTGATAATCGGGCGAGAGAATTTCGAAAGTCACGTTCAATTCCATCACCAAGATACAGAAATGGACGGTAAAAGCTCGGAGTTTGCCTGCGAATCGTGCGGTCAGAGTTTCGACGAAGAATCTTCTTTGAGACAACATGTCAAAACTGAGCATtctttcaaaactttttataaGTACTGCAAGAAATCTTTACTCAAACAGTACGGGATGGACTCACAGAATATTTacaactgtgagtattgtgacAACTCGTTTTTAACCGTGTATGAGTTGAAGGACCATATGCGAGTTAATCACGACATTGAGTATAGCCTTTCAACGTGTAATGTCTGCTTCAATAAGTTTTATAGTAAGGAAACAAGGCGAGCACATAGAAACATTTGTCTCCCCCCGCCAAACGTCAACAGTTGCAGCCACTGCGATAAGCTATTTACTGATATCTCAAGTTTAGAATTTCATACCAGAATTTTTCATCCGCAATCTCAAATCGCCGACTCTAACATATCTTCCACAAACATTGATGAGGAATCTCTATCGTTTAAATGCGAACACTGCGACCGTGTTTACTACAGCGAAAGATCCCTCAAGCATCATTTTAAGCTAAAACACACAACTGACGAAGAAGTAGAATGCCAACTTTGTGGCAAAATATGTAGCAACAAATACTACTTAGCGTCGCATATAAAAATAGTCCACAATAATGATTCTTGGGCCCGTTGTGAGTACTGCGACAAACAGTTTAAATCTAAACGAAATATTCGAAGGCATATAGAATACACACATTTAGGAATGCAAAGATACAAGTGTATCGAATGCGAGACTTTGTTTAAAGAGAAACGGAGCTTAAGAAAGCATGTTAGGACGAAACACCCAAATTCCGCGGCATTCCCTCAATGCCACATTTGTCATAAACGTTTCGAGTCTGCCAAATCTTGTAAGATACATCTAAAACTCTTGCATTCTTTCAATATGAACACCTATCCGTGCCATTTATGCTCAGTATCATTCAGTTCAAATGAGTCCCTGACAATACATTTAGAAACGAAACATTTAGCTGAAGATCAAATCTACAAATGCGAGGAATGCAACTTAGTTTTCAAAGGGCAAGAGAAGTTTGACGCTCATAATGAAGTTTGCCACGTCAATTTAGTCCCTACGGTCAAGCAGAAAGTTCTTCCAAGATGTATTCTATGCATGAAGGATTTCAGCACCAGAAAAACGCTAAAACGCCACATCAAAAAGTTCCACGAAGATTTTGATGTAGACGAGCTTGCGACTTTTGGTTCTCGACGCAGAACTTTTATCGTTGACTGTGAGGAGTGCATCAAGAATTTCAACGACGATTTTTATTTGAACGTCTATAACAAACTTAAGCACTTGAGAGACACTGAGATTTTTAAATGCCAGACTTGTTTCGAGTCCTACAATTCGTTGGAATTCGCTGTGCAAAGGTACAAGTTGACAAATGCGGATGCTTCCAAGTCTAAAATGATTTTAAGTGAGCTTTGTACAACTGAGATGAGTGAAGAGGAGAATGATTTCTCTCACTTCGGGGCACTGCATGATATGTTACCGGAAAGTACGACTAGTGATATTCATATTAAGTTGGAGCCTGTCGAAGATTTGGAGCCGGATATAAAGATGGAACCGGCTACACCAtaa
Protein Sequence
MYTNQLDFVCDYCSRTFTRKYNLQTHIENCHVNSSCRCDICGQNFGSPAGLLQHLSRGHNNYSQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIRCRLCDKTFTTKRNLKRHINQLHNPDVEYPTCNDCHKIFKGKHSLIAHIQSVHNVSEKDAIKCHLCEKVYTNNRNLKRHVEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHSTENQDHLTCNFCMKVIIGRENFESHVQFHHQDTEMDGKSSEFACESCGQSFDEESSLRQHVKTEHSFKTFYKYCKKSLLKQYGMDSQNIYNCEYCDNSFLTVYELKDHMRVNHDIEYSLSTCNVCFNKFYSKETRRAHRNICLPPPNVNSCSHCDKLFTDISSLEFHTRIFHPQSQIADSNISSTNIDEESLSFKCEHCDRVYYSERSLKHHFKLKHTTDEEVECQLCGKICSNKYYLASHIKIVHNNDSWARCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNESLTIHLETKHLAEDQIYKCEECNLVFKGQEKFDAHNEVCHVNLVPTVKQKVLPRCILCMKDFSTRKTLKRHIKKFHEDFDVDELATFGSRRRTFIVDCEECIKNFNDDFYLNVYNKLKHLRDTEIFKCQTCFESYNSLEFAVQRYKLTNADASKSKMILSELCTTEMSEEENDFSHFGALHDMLPESTTSDIHIKLEPVEDLEPDIKMEPATP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00447464;
90% Identity
iTF_01535147;
80% Identity
iTF_00040089;