Basic Information

Insect: Agrotis clavis
Gene Symbol: -
Assembly: GCA_954870645.1
Location: OX940936.1:7455685-7457736[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-09 1.6e-06 29.1 0.0 1 37 15 52 15 59 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-09	1.6e-06	29.1	0.0	1	37	15	52	15	59	0.90

Sequence Information

Coding Sequence: ATGGtgagaaattataaaaaaaaaacaagtagagGGGATTGGTCAGAAGAAAGTATGAAAGATGCTGTGAAAAATGTGGTTGAAGGAAAAATGGGCTACAAGGTTGCAGCAAAATCATTTTCTGTCCCACAGACAACTTTAGAAAGAAAAGTGAAGCTTGCTCGAGAAAGTTTAGATAAGAATGATCCAATGACTGTTAAATTTAAGGTACCGTTAGGCCCAAAAGAGCAAGTTTTCACTGATAATGAAGAGGAAGAGCTATGTAAATACATAATAGATATGGAGAGCAGGCTTTATGGACTGACAATGAAAGACTTAAGAGGTTTAGTCTATAGACTAGcggtaaaaaataacaaacgtcATCCTTTTAACAATGAAAAAGAAGAAGCCGGGAAAGACTGggcattaggatttttaaaaAGGCACCCAGAACTGTCTATTAGACAGCCTGAAAGTACCTCAGCTGCACGTGCTGCTGGTTTCAATAAACAGGTGGTAGAccagtttttcaattttttgggCAATGTTTACGATGAACATCATCTAACACCTGATCGTATATACAACTGCGATGAAACTGGTATTTCAGTTGTGCCCAAAACCaaatcaaaaattatcgcaaGAAAGGGCAGAAAGCAAGTGGGAGCCATAACATCTGCTGAACGAGGTACGACCATTACAGTAGAAATCTGTTTTAGTGCTAGTGGTAATTTTATGCCACCCATGATGGTATATCCTAGAAAAAGAATGGATCCGCAACTTATGATTAATGCTGCCCCCGGAGCTTGGGGAGTTTGCAGTGATTCGGGCTGGATGACTTCAGAGCTTTTCCTAGATTGGTTTAAAAAGTTCGTCGAATTTAGCGGAGCAACACCTGAGCGTCCAGTTTTGTTATTATTGGATGGACATAGTACTCATACGAAGAACATTGATCTCATAAATGAAGCACGCACTCACGGCGTTATCATTTTATGTTTCCCACCACATACTACTCACCGTCTTCAGGTTGCAGACGTTGCTTACATGAGACCGTTAAGTACCTACTACGATCATCAAATCACGGCCTGGCTTCGCAGCAACCCAGGAACGACTGTCACTGTCCGACAAGTAGCTGAAATTTTTGGAAAGGCGTTCATACAAGCGTCTACGATGTCAACAGCTGTCAATGGTTTTAAGAAATGTGGGATTTGGCCATATGATCCAACAGTATTCTCTGAGACCGACTTTGCTCCGTCTTTGATGACAGATATTCAGCTTAATGTATGCGACGCACCTGCAAGCGATAATAGTTCGCTGATAATGGAATCGTCATCCACAGAACCAGCAACAAATAATCAGAATGCGCCAATTATATCTGAAGCCATTTCTGTTGCGGAAACTTTGACGGACGCAGCAGTGACGCCAGTGACAGTGGAAACAGAAACATTGTCGAGACTTGATACTGCCGCTAGTATTTCTGCGACTACGTCACTATCCACTAATCTGGTTACTGCACCTACTGTGCTACCTAATACAATGTCAACCCCTGAACCAGGATGTTCTCACTGGCTCGATAACTCCGATCTACTCGAAAGATCACGAACTCCGCAGCAATCAATATTTGGTGTTGTAAGTCCGCAGCAAATAATGCCCTTTCCAGCAACTACAAAAACATCTCGCTCATCTAGAAAACGAGGAAAAACCGCGGTGATCACATCTTCGCCGTATAAGAATGAGTTAGAAGAAACgattaagaaaaagaaacaagCGGAAGAGGATAAACAGAGAAAAAAAGAGTTGAGGGAActtaaaaaatctgaaaaagaCCCGGCAACTAAGAAGAAAAGAGTAACAAAGAAGAAACAAGGGGCTAAGAATAGATCATTAAACGAAAATAGTGACAGCGATATTGAAAATACACCTTGTTTGTATTGTAAAGGCCTATATTTGGACTCAAATGAAGGCTGGGCTGCTTGTTCAGCATGCGGCAAATGGGCTCACTGCAGCTGTGCAGGTGTGGACGACGAAGATGCAGATACCGTGTTCACTTGTGAACATTGTGAACAGTCCTAA
Protein Sequence: MVRNYKKKTSRGDWSEESMKDAVKNVVEGKMGYKVAAKSFSVPQTTLERKVKLARESLDKNDPMTVKFKVPLGPKEQVFTDNEEEELCKYIIDMESRLYGLTMKDLRGLVYRLAVKNNKRHPFNNEKEEAGKDWALGFLKRHPELSIRQPESTSAARAAGFNKQVVDQFFNFLGNVYDEHHLTPDRIYNCDETGISVVPKTKSKIIARKGRKQVGAITSAERGTTITVEICFSASGNFMPPMMVYPRKRMDPQLMINAAPGAWGVCSDSGWMTSELFLDWFKKFVEFSGATPERPVLLLLDGHSTHTKNIDLINEARTHGVIILCFPPHTTHRLQVADVAYMRPLSTYYDHQITAWLRSNPGTTVTVRQVAEIFGKAFIQASTMSTAVNGFKKCGIWPYDPTVFSETDFAPSLMTDIQLNVCDAPASDNSSLIMESSSTEPATNNQNAPIISEAISVAETLTDAAVTPVTVETETLSRLDTAASISATTSLSTNLVTAPTVLPNTMSTPEPGCSHWLDNSDLLERSRTPQQSIFGVVSPQQIMPFPATTKTSRSSRKRGKTAVITSSPYKNELEETIKKKKQAEEDKQRKKELRELKKSEKDPATKKKRVTKKKQGAKNRSLNENSDSDIENTPCLYCKGLYLDSNEGWAACSACGKWAHCSCAGVDDEDADTVFTCEHCEQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157642;
90% Identity: iTF_01156318;
80% Identity: iTF_00928611;