Acla014060.1
Basic Information
- Insect
- Agrotis clavis
- Gene Symbol
- -
- Assembly
- GCA_954870645.1
- Location
- OX940924.1:27868473-27903820[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00013 0.72 11.5 0.3 13 44 18 49 15 69 0.75 2 4 6.4 3.6e+04 -3.5 0.0 34 41 107 114 97 119 0.75 3 4 2.1e-05 0.12 14.0 0.2 14 44 305 335 304 337 0.94 4 4 0.018 1e+02 4.6 0.3 17 34 633 650 628 656 0.87
Sequence Information
- Coding Sequence
- ATGGCAGCGGTGGCAGACAGCCTCAGCCGGCCTCCTCCCGCATCGACAACATCGGACGAAATGTCCcaaatgcgggaggaggtcgccaagctcacggcggcgatggatGCTCTCCGTAAGGAGAACATCCAGCTGAAAGAGGAGCTGGCCGGACTGCGGAAGGGGGGCCGCCGAGAGGAGGTCCCGCAGGCGCGAACGCAGACGCAGGCGCAGACGCGGCAgaaggagccgccggcgaagcccgcaccaaAAGACGACAGCAACGCTGTCTtaaatctggtgcggcaggagctggcggccttcaaccagcgctttacagcgctggagaaccgcgtcttgcgccccccgctcgcgTCATCCTATgcggccgtagcggcttccGCGCCGCCCAGGCCAGCCCCGGAAAAGCGGGCCGCGGCGAAACCGCCGGCGCCTCCCAAACAGGCCACAGGGAGAGCTgccccggcggcggcggcaccggctggggcgaaggcggccccgcaGAGCCCGGCTgcgaagaaaagaaagaaaggtgttccggcggcggcggcggtgagcgtatgCTCTGGAAGCACGACAAGGAGGGACGAGGGGAGCGCCGCCAGCAGGAGGAAGGAATTCCTCAAGCGCTCCCGGGACGACGTCTCTTCATCCGAGGAGGATGCTGCCTCGAGCCGGAAGATCCCCACcagtgtgcggggtaaaggccgaggcgggacgtgcggTAGAGGGCGGGAAGCCGAGCCCTCCCTAGAAAAATTGGTGGAGGACGCCATCCGCACTATTAAGGCCAAGCCTGGCAGGCCCGGTAAAAAGGCCACAAAGGACTTGGCCATAAGTAAGGCCACGGCCACTATAATGGCGGCGGTGTCGGGCGGCATCGGACGGCCTCCACCCGCATCGAGCCCATCGGACGAAGTGTCCCAGTtgcgggaggaggtcgccaAATTGACGGCAGCGATGGATGTTCTCCGAAAGGAGAACATCCATCTTAAAACGGAGCTGGCCGGGCTAAAAAAGGGGACCCGCGGGGAGGAGATCCCGCAGACGCGGAGgaaggagccgccggcgaagcccgcaccaaCAGATGACAGCAATGTCTTAAGTCTGGTGCGACAGGAGCTGGCGGCTTTCAACCAGCGGTTCGCGGCTCTTGAAAGCCGCATCCTGCGTCCCCCGCTCGCGGCATCATACgcggccgtagcggcttccGCGCCGCCCAGGTCAGCTCCGGAAAAGCGGGCCGCGGCGAAACCGCCGGCGCCTCCCAAACAGGCCACAGGGAGAGctgctccggcggcggcggcaccggctggggcgaaggcggccccgcaGAGCTCGGCTGCCAAAAAGAAGAAAgCCACCAGACCTGTAcgaccctccctttacaaggGTATGTCTGTGTGCGCTCAAATGGTCACCCCCGACCCACATGACGCCCCGTACGAGCATCGGTCGACGGGGGAGTCCATGGGGGAAAAGCTGCTTTCCCCGAAGGAACGCGACGAGGTGAAGCGAAGAATAACCTTCGAGGACGCCACCCCTCGTGCGTATATCGAGGTCTTCACCACGCCAAAGGGGCGCCCGCCTCCCGTGGCCGCTACCGGATTGCTCGGTGGGGCTGTGGCCGAGCGTCGCAGTCGTCTTGAGGAGGCGAGAGATTGCCTACAGAAGGCGAAGCTCAACCTGGGCAACTCTCGCAACCTCAAGACAAACATCAAGAACGCGGTGCTGGAGGCCCTGGAACGGCTCTTCGAGCTGGTCGAGGACGCGGAACTCGAGCGGGCCCCTGATGCGCCAGTGACCGTGCCAGAGCCGAGGACCACCGCATCCACCGCTGTCCATAGTTCCGCACCCGTCTCCGTCGAGATTCTTGCTGGCCAGACTGAGCTCCTCAACACCCTCAAGGAGCATATCTCGGAGTTGAAAGACCACTCCGAGAAGATGGATAGACTCCGAGACAGTCTGGCCAGCGGGGAAAGTGTGGGGGGGGAAACATACGCGAGTGTTGCGTCAACGACTAGTCGCCATACCGGGACCCAGGCCCTGGAGCGAAAGACGCTGCACTCCGTGGTTGTCTCCTCCACTGAGGTGATGGATACGGGTGACGAGATCCTGGAAAGGGTCAGGAGAGCGGTGGATGCGAAGGACGGCTGGGTTCGGGTGGAACGTGTGAGAAAGGCCAAGGACCGGAAGATCATTATGGGGTGTGCGACAAAGGAGGAGAGAAAAAAGATCAGGGAGCGACTGCAGGCGGCCGGAGGAaacctcgtcgtcgaggacgTGAAGAATAGGGACCCGCTTCTGATTCTGAGGGATGTACTTTCAGTACACAGCGACGAGGAAGTGCTCGCAGCCCTCAGGAGTCAGAATCGGGAGATCTTCTGCGGCCTCGACGACGAGGAAGGGAGAATGTCTGTCAAATACAGGAAAAAGGTACGAAACCCGCATGTAAACTGCATTGTGCTGACTGTATCCCCCATTATCTGGAGGAGGGCACTCGAAGGAGGCAAGCTCCGAATTGACCTCCAGAGAGTGCGCGTCGAAGATCAGAcgcctctggtgcagtgcaccCGCTGCCTAGCATTCGGCCACGGCAAGCGATTCTGCACGGAGCCAGCCGATCTCTGCAGCCACTGCGGTGGTCCACACCTTAGGTTGGACTGCCCAGTCAAGCAGAGCGGCGGGGCAGCGGTATGCGTGAACTGCACCAGAGCAAAATTGGGGGAGCATCAGCACAGTGCTTTTAGTGACGTTTGCCCGATCCGTAGGAAGTGGGACGCATTCGCGAGGGAAGCAATAGCCTATTGCTAA
- Protein Sequence
- MAAVADSLSRPPPASTTSDEMSQMREEVAKLTAAMDALRKENIQLKEELAGLRKGGRREEVPQARTQTQAQTRQKEPPAKPAPKDDSNAVLNLVRQELAAFNQRFTALENRVLRPPLASSYAAVAASAPPRPAPEKRAAAKPPAPPKQATGRAAPAAAAPAGAKAAPQSPAAKKRKKGVPAAAAVSVCSGSTTRRDEGSAASRRKEFLKRSRDDVSSSEEDAASSRKIPTSVRGKGRGGTCGRGREAEPSLEKLVEDAIRTIKAKPGRPGKKATKDLAISKATATIMAAVSGGIGRPPPASSPSDEVSQLREEVAKLTAAMDVLRKENIHLKTELAGLKKGTRGEEIPQTRRKEPPAKPAPTDDSNVLSLVRQELAAFNQRFAALESRILRPPLAASYAAVAASAPPRSAPEKRAAAKPPAPPKQATGRAAPAAAAPAGAKAAPQSSAAKKKKATRPVRPSLYKGMSVCAQMVTPDPHDAPYEHRSTGESMGEKLLSPKERDEVKRRITFEDATPRAYIEVFTTPKGRPPPVAATGLLGGAVAERRSRLEEARDCLQKAKLNLGNSRNLKTNIKNAVLEALERLFELVEDAELERAPDAPVTVPEPRTTASTAVHSSAPVSVEILAGQTELLNTLKEHISELKDHSEKMDRLRDSLASGESVGGETYASVASTTSRHTGTQALERKTLHSVVVSSTEVMDTGDEILERVRRAVDAKDGWVRVERVRKAKDRKIIMGCATKEERKKIRERLQAAGGNLVVEDVKNRDPLLILRDVLSVHSDEEVLAALRSQNREIFCGLDDEEGRMSVKYRKKVRNPHVNCIVLTVSPIIWRRALEGGKLRIDLQRVRVEDQTPLVQCTRCLAFGHGKRFCTEPADLCSHCGGPHLRLDCPVKQSGGAAVCVNCTRAKLGEHQHSAFSDVCPIRRKWDAFAREAIAYC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -