Agen047864.2
Basic Information
- Insect
- Agriphila geniculea
- Gene Symbol
- sip1_1
- Assembly
- GCA_943789515.1
- Location
- CALSUL010000738.1:316-20733[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 7.1e-36 1.5e-31 111.8 2.1 2 170 365 514 364 518 0.95 2 9 1.8e-07 0.0039 18.7 0.4 132 170 518 551 515 555 0.90 3 9 3e-07 0.0065 17.9 0.5 132 168 555 586 551 590 0.92 4 9 8.5e-05 1.8 9.9 0.6 140 170 587 612 585 616 0.87 5 9 1.7e-07 0.0037 18.7 0.5 132 170 616 649 613 654 0.90 6 9 1.7e-07 0.0037 18.7 0.4 132 170 653 686 649 690 0.90 7 9 1.3e-07 0.0027 19.2 1.3 132 168 690 721 686 723 0.93 8 9 8.8e-05 1.9 9.8 0.8 140 170 722 747 719 751 0.87 9 9 2.4e-32 5.3e-28 100.2 0.6 132 275 751 890 746 890 0.96
Sequence Information
- Coding Sequence
- atgtctGATGATGAGGTTATACGGTTCGAAATTACGGATTATGATTTGGACAATGAATTCAACCCCAATAGAGGCAGAAAAGCTAAAAAAGAGCACCAAATATACGGTGTGTGGGCTAAAGACAGCGATGAAGAGGACAATGAGGATAACATAAGACAGAGAACTCGGAAGCAGAAAGACTTTTCTGCTCCCATCGGTTTCGTGGCTGGCGGGGTCCAGCAGGCGGGCAAGAAGAAAGAAGACAAAAAAGAAATAGAACCATCTGATGCACCAAAAACAGCCTTTGCAGTGGACAGTTCTGATGAAGAAGGTCCAGCCAACCCTGATGAGAGGGACACGGCGGGCCTACGCCGACAGGGCATGGGTCTGCGGCCCCCCAACCTTGGAGGCAACGTCGGAAACTGGGAGAAACACACTAAAGGAATTGGTGCTAAACTACTCTTACAGATGGGCTACAAACCTGGTAAAGGTTTGGGTAAAGACCTCCAGGGTATCTCAGCACCCGTGGAAGCTACTGTGAGGAAAGGAAGAGGCGCCATTGGTGCCTATGGTCCTGAGAAGGCAGCTctAAAAGCAAAAAAGGAAGAAGAGCGCCGCCTAAAAGAGAAAGAAGAACAAGAGAAAGGCACGACAGAAAAGACATACAACTGGAAAAAGTCACACAAGGGCCGGTATTTCTACCGCGATGCGGCTGATGTCATACAGGAGGGTAAACCGACATTACATACTATATCcagTAGCGAGTTGTCGCGCGTGCCTGTGATAGACCTGACGGGCCGCGAAAAACGCGTGCTATCGGGCTACCACGCGCTGCGGGCCGCGGCCCCGCGGTTCGAGCACGAGCCGCGCCGCGACTGCCGGCACTTCGCGGCGCCGCAGCTCGCGCACAACCTAGAGCTGCTCGTGGACTGCTGTGAGCAGGATATAATCCAAAATGCCCGCGAGCTCCAAACCGCTGAAGACGAGATAGTAGTCCTCGAGAGGGATCTCGAGGAATGCGACCAGAAGATAGCTGACCAGGACGACGTGATCGGCAAGATGCAGGGCATCATCCGCCGCGTCGAGGAGTTGGCGGAACATGATGTGTCTCTGGAGACTGCGCACGAAGTGCTGGCAGATCTGAAGGAAACATACCCCACGGAGTACGAAGTATTTGGCCTAGGCACTATAGCTGGCAACATTGTGAGCCCTCTATTAAGCGCTATGCTAGCGACCTGGCAACCCCTCGAGAACCCTGAAGAACCAATACCGACATTCCTCAAGTGGAAGAAACTCCTTACAGACGAAGCGTACAGCAGTTTGCTCTGGCAACACTACGTCCCACACATCAACACTGCTTCTGAATCTTGGAACCCTCGCGTACCGGGTCCGATGTTACGCGCTCTAACTAGCTGGTCTGAAGCATGCCCTACTTGGGTGCTATCGCAGACTGCAGCGCGATGTGTAGTGCCTCGTATACTGGCCGCAGTCCGCGCGTGGGACCCCACGGGGGATACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGCTTCAGCACGTTGTGTAGTGCCTCGTATACTGGCCGCAGTCCGCGCGTGGGACCCCACGGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGCTTCAGCACGTTGTGTAGTGCCTCGTATACTGGCCGCAGTCCGCGCGTGGGACCCCACGGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGTCCGCGCGTGGGACCCCACGGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGCTTCAGCACGTTGTGTAGTGCCTCGTATACTGGCCGCAGTCCGCGCGTGGGACCCCACGGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGCTTCAGCACGTTGTGTAGTGCCTCGTATACTGGCCGCAGTCCGCGCGTGGGACCCCACGGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGCTTCAGCACGTTGTGTAGTGCCTCGTATACTGGCCGCAGTCCGCGCGTGGGACCCCACGCGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGTCCGTGCGTGGGACCCCACGGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGCTTCAGCACGTTGTGTAGTGCCTCGTATACTGGCCGCAGTCCGTGCGTGGGACCCCACGGGGGACACGCAGCCGCTGCACCAGTGGGTGCTGCCGTGGCATAATATAGCGGGTGAAGCGTTAGCTCGAGGGACATATCCAGCCATTCGGTCGCGTCTCGCGACAGCTTTAGGCGCCTGGCATCCAGCAGACCCTTCGGCTAGGACCCTCTTATGTGCGTGGAAACAAGCGTGGGGCGCCGCCCTAACCGCCATGCTGCACCAACACGTGGTGCCCAAACTAGACCACTGCCTGCAGCACGCGCCGCTGGAGCTGGTGGGGCAGGCCAACACTGCGTGGCTGTGGTGCGTAGATTGGCTGGAATTGCTCGGCGCTCCTACGTTAGCCGCCGTCGCGTCGCGCGCGCTTCTGCCGCGCTGGTTGGCCGCGCTGGCCGCCTGGCTCAACACCAACCCACCGCACGCCACTGTTCTCACTTCTTATACTGATTTCAAGAAAATGTTTCCAGAAGAAGTGTTAAAAGAACCAGCTGTTCGCGATGCGTTCCGCAAAGCATTAGACATGTTGAATCGCAGCACAGACATCGACTCCGTAGAACCTCCGCCTCCACCTCGTTTCACCATCACAGACACTCCTAAAGAAACCTCCAGAATAGCAGACGTTCTAGCTTCGACAACGCAACAAAAATCGTTCTCAGAATTACTAGAAACACGATGTTTAGAAAAAGGTATTACTTATGTACCTTTAGCGGGGAAAACGAGGGAAGGAAGACCGTTGTACAAGATTGGAGATATGCAGTGCTATGTCATTAGAAATGTTGTTATGTATTCAGAAGATAATGGAAGGGCTTTTGCGCCTATCAGTATGGACCGATTGTTAAATATTGTGGAAGATTAA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRGRKAKKEHQIYGVWAKDSDEEDNEDNIRQRTRKQKDFSAPIGFVAGGVQQAGKKKEDKKEIEPSDAPKTAFAVDSSDEEGPANPDERDTAGLRRQGMGLRPPNLGGNVGNWEKHTKGIGAKLLLQMGYKPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAALKAKKEEERRLKEKEEQEKGTTEKTYNWKKSHKGRYFYRDAADVIQEGKPTLHTISSSELSRVPVIDLTGREKRVLSGYHALRAAAPRFEHEPRRDCRHFAAPQLAHNLELLVDCCEQDIIQNARELQTAEDEIVVLERDLEECDQKIADQDDVIGKMQGIIRRVEELAEHDVSLETAHEVLADLKETYPTEYEVFGLGTIAGNIVSPLLSAMLATWQPLENPEEPIPTFLKWKKLLTDEAYSSLLWQHYVPHINTASESWNPRVPGPMLRALTSWSEACPTWVLSQTAARCVVPRILAAVRAWDPTGDTQPLHQWVLPWHNIAASARCVVPRILAAVRAWDPTGDTQPLHQWVLPWHNIAASARCVVPRILAAVRAWDPTGDTQPLHQWVLPWHNIAVRAWDPTGDTQPLHQWVLPWHNIAASARCVVPRILAAVRAWDPTGDTQPLHQWVLPWHNIAASARCVVPRILAAVRAWDPTGDTQPLHQWVLPWHNIAASARCVVPRILAAVRAWDPTRDTQPLHQWVLPWHNIAVRAWDPTGDTQPLHQWVLPWHNIAASARCVVPRILAAVRAWDPTGDTQPLHQWVLPWHNIAGEALARGTYPAIRSRLATALGAWHPADPSARTLLCAWKQAWGAALTAMLHQHVVPKLDHCLQHAPLELVGQANTAWLWCVDWLELLGAPTLAAVASRALLPRWLAALAAWLNTNPPHATVLTSYTDFKKMFPEEVLKEPAVRDAFRKALDMLNRSTDIDSVEPPPPPRFTITDTPKETSRIADVLASTTQQKSFSELLETRCLEKGITYVPLAGKTREGRPLYKIGDMQCYVIRNVVMYSEDNGRAFAPISMDRLLNIVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -