Basic Information

Insect: Agriopis marginaria
Gene Symbol: -
Assembly: GCA_932301435.1
Location: CAKOAR010000202.1:408520-415986[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.2 3.1e+02 2.5 3.9 1 23 192 214 192 214 0.97

2 18 0.002 0.12 13.2 1.0 2 23 220 241 219 241 0.97

3 18 2.5 1.5e+02 3.5 1.5 1 23 247 269 247 270 0.94

4 18 0.21 12 6.9 3.4 2 22 505 525 504 525 0.95

5 18 5.8 3.4e+02 2.3 0.4 1 20 623 642 623 645 0.70

6 18 0.63 38 5.4 0.4 2 23 780 801 779 801 0.96

7 18 0.09 5.3 8.0 1.0 3 23 881 901 880 901 0.98

8 18 0.036 2.1 9.3 0.5 1 23 909 931 909 931 0.97

9 18 0.14 8.5 7.4 3.4 1 23 970 992 970 992 0.95

10 18 0.00028 0.017 15.9 4.0 1 23 1000 1022 1000 1022 0.99

11 18 1.1 66 4.6 1.0 1 23 1180 1202 1180 1202 0.95

12 18 0.046 2.7 9.0 0.1 1 23 1208 1230 1208 1230 0.97

13 18 0.0095 0.56 11.1 1.6 1 23 1296 1318 1296 1318 0.95

14 18 0.017 1 10.3 0.9 1 23 1324 1346 1324 1346 0.95

15 18 0.0079 0.47 11.4 2.6 1 23 1437 1459 1437 1459 0.97

16 18 0.0002 0.012 16.4 1.4 1 23 1465 1487 1465 1487 0.99

17 18 0.37 22 6.1 2.0 1 23 1579 1601 1579 1601 0.96

18 18 0.0035 0.21 12.5 3.7 1 23 1612 1634 1612 1634 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.2	3.1e+02	2.5	3.9	1	23	192	214	192	214	0.97
2	18	0.002	0.12	13.2	1.0	2	23	220	241	219	241	0.97
3	18	2.5	1.5e+02	3.5	1.5	1	23	247	269	247	270	0.94
4	18	0.21	12	6.9	3.4	2	22	505	525	504	525	0.95
5	18	5.8	3.4e+02	2.3	0.4	1	20	623	642	623	645	0.70
6	18	0.63	38	5.4	0.4	2	23	780	801	779	801	0.96
7	18	0.09	5.3	8.0	1.0	3	23	881	901	880	901	0.98
8	18	0.036	2.1	9.3	0.5	1	23	909	931	909	931	0.97
9	18	0.14	8.5	7.4	3.4	1	23	970	992	970	992	0.95
10	18	0.00028	0.017	15.9	4.0	1	23	1000	1022	1000	1022	0.99
11	18	1.1	66	4.6	1.0	1	23	1180	1202	1180	1202	0.95
12	18	0.046	2.7	9.0	0.1	1	23	1208	1230	1208	1230	0.97
13	18	0.0095	0.56	11.1	1.6	1	23	1296	1318	1296	1318	0.95
14	18	0.017	1	10.3	0.9	1	23	1324	1346	1324	1346	0.95
15	18	0.0079	0.47	11.4	2.6	1	23	1437	1459	1437	1459	0.97
16	18	0.0002	0.012	16.4	1.4	1	23	1465	1487	1465	1487	0.99
17	18	0.37	22	6.1	2.0	1	23	1579	1601	1579	1601	0.96
18	18	0.0035	0.21	12.5	3.7	1	23	1612	1634	1612	1634	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCTGAGCGCGCAAGTCGGCGAGGTCACAGCTATCGCGCGCCCCCTCGAAGGCCGCCTGTGCTTGGACGTCCTCTCGGAGGCATCGTCCGACGCGGCGGAAGATTTCGAATTGCCGCATTGCAAGATAAGAAGGAACTATAACTGTGCGAAGTGCACGTTCTATACGCAGAACCCACGCGCTTATCTTTTGCACACGCGTGACGTTCACTTCGGAAGGTTCAAGATATACGATTGCCAACATTGTATGTATGCTTCACAACACCACCAGAAGCTCCTGAGACATATGAAGATGGTGCATGGAGGATTACCCGCGCCTTCAGCGTCGACCGCCAGGACGGAGACGGAGCGCCCCATCGTCACCAGAGCGGAGCCGGAGCCCGTCGCGCCCAACAGCCCTGAGTACCACGAGCGGATGGAGGATTTACTAGAAGAAATCGAAGAATGTGACGATATACAGATAGATGAGGACGGCGACGACCAGTCCGACCGGATGGAAGACAGCGATCCCAGGGGCTCTAACTCCTCGAGACCCAAAGGAAAGGGCAAATTTTTCTCTTGTGACAAATGCAACTACGTCACCCACATAAAGGCGAGATATACGAAGCACGTCAAGTACCACTCGATGCCGATGATCAAGTGCACTATGTGCGACTTCCGCACCCCGTACAAGTGGAATTTGGATCGTCACATGAAGAATCACGGCGGGACCGGAAACTTTGTGTGTTCGAAATGCACCTTCACGGCGGATATCAAGCAGAGTCTGACCGTACACGAAATGAATCATCACACGCCGCCGGTGGGGCACGGTGGGAGCCGCCGCCGCAACCGGGTGGGCGCCAGTGACATGACGGCCGCCGACCCGATGGGCGCGCTGCTCCCCAAGGAGGAGGAAGGGAGCGCCGACTCGCACTCCTCACACTCGGCCTCGGACATAATGGGGTTACAATACGCAGAGAGGGACATAGTGAGCTGCAATAGCGATTCAAACGACGCGAGCTCGTCGCACGCCGACGACGCGCACCGAGACGGAACACAAGACGCCCCTAGCCAGCACTCGCCCGGTTCCGCGACCGACGACCCGAAGTCACAAAAACAGAGCAGGAAGGCCCCCCGGCCAATACCGCAACTCATCCCACTAAACGCGTCTACTCCTAATCAAAAATCATCCGGCGAGCCACCGGCCAAAAAGTTTAAAGAATCAACAAGCTCCGAATTCATCGGAAAGTTTGAAAACTTACCGGAAGATATAACTTTGATACCCGTCAATGTGCCACCCAAAGAATCCACAGCGCGCAAGAAAAACCATTCCTTTTTCGACAAATTAAAGGAAAGGCTCTTGACTGAAACGGGCGAAGAAGGATCGCTGAAATGCAAAAATTGTGGTTTCGAAAGCAAATGTCTGTCAGAACATTCGGTGCACGAGAAAAATTGCTCCACTCAGGGCAATCGTATTACGATGAATACGGCGCTTCCAACTAAGGGCTCCACTCGTTGTCAAAACTGTAGACACAGATGTAAATCCAGCGCAGACTTGTATGTGCACATGCAAACATGTGGAAAGAAAGACAAAGTTTCTACAGAAACTGTCACAAACACTAAATATAAGAATGAAGCTTCCACATCACAATTGGAGAAGGAAGCGGAACCACATCCTATGGAAAACGTTGTTTTCGTTTGGAATAATATCAATCAAGAGACCAACAAATTCGACAGACCTTTAGATATCAACATTAACGACGATTCGTCAATTACTGACCTAAATAGACATTACGACACCGAGACTGTAGACGACAATGAGGGCATGAACTTGTCACCAAACAGTTTGAGTCTCGGCAAGAACGTATACAAATGCCCAGATTGTAAATTTTGGGCGGCCACCGCATCCAGATTTCATGTGCATATCGTCGGCCATCTCAACAAAAAACCCTTTGAATGTTCCCTATGCAAATATAAATCCAATTGGCGATGGGATATTACCAAACACATTAAACTGAAATCTGCCAGGGACCCAGAGCACAACGACGCCAAGGTACTAATGACCGACGAAACCGGCAGAAGAAACTATAGTAAGTACAACAAGTTCTTGGCTGTGCCAGTTTTAAATGAAAATGGCGAAAACGATTTCCACTACATAGATCCAAATACGACGCTGGATGCGTCCATGGAAGTAGATGAATCATACGGCAATGAGACGACTGACATGATGCATGTGTCCTACGAGATGCAGCCGCTCAACCTTCAAACTCAAACCACTGATAAATATCACATGGATAATAGGAATACGGACAGTAAAAAGCCTAAGAAGACATTATGGAAATGCAAAAAGTGCAACTATAAGGACCCATCTAAAGAAGCCTTGCTAGAGCACGTGAGACAGCATTCGAGAGAGGGCGCAGATGATGCTCCTCAAAGCAACAACAAGAAGCTCGAAAATGCTCCTGATCCCGCGGATTTGGCATACCGTTGTGGACACTGCAATCAGCTTTCTAACTGGAAACACGTCATACAGAGGCACTGCCGTTTGAAGCACGACGGAATCATCAAAGTCATCACTACAGTGAAACCTAAACCAGATCCGTCTCAAGTACCAGGCAACGAAGGGTCATACAGCGACCTTTGTACGAAGTGCCCATTCAAGGCTAACGATAAAAAACAACTCCAAGAACATTTGCAACAGCATCAGCCATCACCAGAATCCATCTTCAAATGCTATTTCTGCCCTTACTTTGTCAAAGATGAACAAGACTTGATCCAGCATCTCTTGTTACATGGAATAACTGACCCAGAGGATTATATCTCTAAAGCGATGGGTTGCAGATCTCCATTACCGGACCGAATTCTCACAAACTCCGATATACCGCCACCGAGTCATACAACGAAACGTCACAAATGTACTGAATGTCCTTACGAAACAAACAGCAAATCTCAATACATGTATCACGAACAATTTCACAGGCTTCCGGCAGATACCCCCTACAAGTGCCCAGAATGCAACTATAGCGTATCAAAGAGACATTTACTTCACCAACACCTTAGAGTACACGGGATTCATCCATCATCGGACCGAAAGAAACATGAGTCAGAAGCAGAATTGGAAGCTAATATGGCTTCTCAAAGTAAACTAGACTTTGCAGATGATTTGCCTTTTGTTTGGGTTTCAGCGAGGGATGAATTTCATAAAATGTATAAGTGCCGCTATTGCTCTTATGTCAATTCTCAGAAATGTAAGTTACCAAACCACGAAAAAATTCATTGCCTGGAATTTGAAAATAGCGATGTTATTATTTACAAATGTTTAGAATGTAAATTTACATGTGATGACCCTGAAAAAGGTGCGGAACATTCCAAAAAGCATGGCCTGTTGTATGGTCGTATCTACAGCTATGTAGAAGATAATATTCCAGATGAGGATCAAATTGCTAAATTACGCAGGATCATCGAACAAGAAAAGGCTGTGGAGGAGTCAACAAAAGACGATAATGCAACTGCCGATTCACCTGAAAATAAAATTATGTTTTATTGTCGGAAATGTCCAGCTAATTACTTCAATGAAAGTGAAATAAAAGTCCATGAAAAGTTCCATGACCGTACTTTGGAATACAAATGTAAGATCTGCGAGTTCTCAGTGCCAGAAGAAACGGAACTGACGGCTCATGAAACTGTGCATTCGGACGATTACCATATCAGGACAAATATGCATAAATTCGTTCATAACTACCACTCTCTTTACAAACCACCTCGGTTGGAATTTACCCGTAGTTCCGAATCTTCAGCAACATTATGGAATGTGGTAGTAAACAAACCTATTGAACACGTGGAGCATGTTCATAAGAAATCAGAGTCAAAACATACACCAAAACAATATCATTGCAAAGAATGTCCAGCTAAATTTTTCAAAAGTTCAGCACTCTCATACCACATGGGTTTACATGGTGGGGAAGGCGAACATAAATGCAAAAAATGCAGTTATGCTGTCAAAAACGTTGGTAATTTAGCCAAACACGAAATATTGCACGACATCGAAAACAAACCGTCCGATCGCTGCGATTATGACTCCGGTGAAGATATGGATTACAAAAATGTTCCCCTCTCTGGGACAGATTTATTCCAAAGAAAGACTGAAGCTATTAAAAGAGTATTGACTGACAAAGATAAACTGGTCAGACCAAACGACCACTTTCCACCCGTGCTCCAAGCTGACCCACAATTCGGTTACCTCATGCATGGTAATCCTGAATTCATATATCCTACATATTTGAAAAATGGACGGCAAAAAGAAAAAAGATATAAATGCCACAAATGTCCATCAGCATTCGAAAAGAGAGAACAATACAAGATACATCTATCCCTCCACGGCTCGAAACAAAGATACAAGTGCGAACTGTGCGACTATTCTGTAAAGTATTACGCTAATTACGTGCAACACATGAGGAAACATCAAATGAACGATGAAGCTCAAGCAGAAAGGAAGAAGGGCAGTAGTGGTTTTATCGAACCTGATAATCAAGAAGACGAGAAAAAAGACGATAGCGCGGATAACATTAAATTAGCGATCAAAACTATGCCCAAAGGTGCGCCTAAAACAGATTTCCAGCAGTTCTCAATTAGAGACCAGCAAACCTTGCGACTATTACAACGGAGGAGGTCCATGAATACCGGCGGTAAAGACGCGGGCTCCAATGAAACCTCGCCGGCAAAAGAACGCAAATTGCACATGTGTCTCCTGTGTCCGTACACCAACCAACGGCAGGACGCCCTGAACAATCACTACAGGAGGCACGATGCCGCCGATATTCTTAATATCGGAAACCATAAATGCTCTTACTGCGACCTAGTCGTCGTTCAATCACATTTCCTACGTGACCATTTAAAAACTCATTTCAGTTATCATAAAACTCTGACACCTGAATGTTTTGTTGCTAATGAAAACGTGACTTTCACTATTAGCAAAGTTGATGAAGAAAGCGAACCTCTTGATCTCAAATTAGACGTGAAAAGCAAAATTATATTCAATGATGAAAAGATGTTTGTAAATATGAAAACTGGCGAAGTAGTCGTGGAATAA
Protein Sequence: MLQQMSSPLSAQVGEVTAIARPLEGRLCLDVLSEASSDAAEDFELPHCKIRRNYNCAKCTFYTQNPRAYLLHTRDVHFGRFKIYDCQHCMYASQHHQKLLRHMKMVHGGLPAPSASTARTETERPIVTRAEPEPVAPNSPEYHERMEDLLEEIEECDDIQIDEDGDDQSDRMEDSDPRGSNSSRPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGNFVCSKCTFTADIKQSLTVHEMNHHTPPVGHGGSRRRNRVGASDMTAADPMGALLPKEEEGSADSHSSHSASDIMGLQYAERDIVSCNSDSNDASSSHADDAHRDGTQDAPSQHSPGSATDDPKSQKQSRKAPRPIPQLIPLNASTPNQKSSGEPPAKKFKESTSSEFIGKFENLPEDITLIPVNVPPKESTARKKNHSFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCSTQGNRITMNTALPTKGSTRCQNCRHRCKSSADLYVHMQTCGKKDKVSTETVTNTKYKNEASTSQLEKEAEPHPMENVVFVWNNINQETNKFDRPLDININDDSSITDLNRHYDTETVDDNEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENDFHYIDPNTTLDASMEVDESYGNETTDMMHVSYEMQPLNLQTQTTDKYHMDNRNTDSKKPKKTLWKCKKCNYKDPSKEALLEHVRQHSREGADDAPQSNNKKLENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPSQVPGNEGSYSDLCTKCPFKANDKKQLQEHLQQHQPSPESIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYISKAMGCRSPLPDRILTNSDIPPPSHTTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIHPSSDRKKHESEAELEANMASQSKLDFADDLPFVWVSARDEFHKMYKCRYCSYVNSQKCKLPNHEKIHCLEFENSDVIIYKCLECKFTCDDPEKGAEHSKKHGLLYGRIYSYVEDNIPDEDQIAKLRRIIEQEKAVEESTKDDNATADSPENKIMFYCRKCPANYFNESEIKVHEKFHDRTLEYKCKICEFSVPEETELTAHETVHSDDYHIRTNMHKFVHNYHSLYKPPRLEFTRSSESSATLWNVVVNKPIEHVEHVHKKSESKHTPKQYHCKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHDIENKPSDRCDYDSGEDMDYKNVPLSGTDLFQRKTEAIKRVLTDKDKLVRPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGSSGFIEPDNQEDEKKDDSADNIKLAIKTMPKGAPKTDFQQFSIRDQQTLRLLQRRRSMNTGGKDAGSNETSPAKERKLHMCLLCPYTNQRQDALNNHYRRHDAADILNIGNHKCSYCDLVVVQSHFLRDHLKTHFSYHKTLTPECFVANENVTFTISKVDEESEPLDLKLDVKSKIIFNDEKMFVNMKTGEVVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00927143;
90% Identity: iTF_00033444;
80% Identity: -