Basic Information

Insect: Agriopis leucophaearia
Gene Symbol: -
Assembly: GCA_949125355.1
Location: OX421263.1:6474438-6482011[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.3 3.9e+02 2.5 3.9 1 23 193 215 193 215 0.97

2 18 0.002 0.15 13.2 1.0 2 23 221 242 220 242 0.97

3 18 2.5 1.9e+02 3.5 1.5 1 23 248 270 248 271 0.94

4 18 0.21 15 6.9 3.4 2 22 506 526 505 526 0.95

5 18 5.8 4.3e+02 2.3 0.4 1 20 624 643 624 646 0.70

6 18 0.64 47 5.4 0.4 2 23 781 802 780 802 0.96

7 18 0.091 6.7 8.0 1.0 3 23 882 902 881 902 0.98

8 18 0.037 2.7 9.3 0.5 1 23 910 932 910 932 0.97

9 18 0.15 11 7.4 3.4 1 23 971 993 971 993 0.95

10 18 0.00029 0.021 15.9 4.0 1 23 1001 1023 1001 1023 0.99

11 18 1.1 83 4.6 1.0 1 23 1181 1203 1181 1203 0.95

12 18 0.0077 0.56 11.4 0.1 1 23 1209 1231 1209 1231 0.97

13 18 0.0096 0.7 11.1 1.6 1 23 1297 1319 1297 1319 0.95

14 18 0.034 2.5 9.4 0.9 1 23 1325 1347 1325 1347 0.92

15 18 0.008 0.58 11.4 2.6 1 23 1438 1460 1438 1460 0.97

16 18 0.0002 0.015 16.4 1.4 1 23 1466 1488 1466 1488 0.99

17 18 0.37 27 6.1 2.0 1 23 1580 1602 1580 1602 0.96

18 18 0.0035 0.26 12.5 3.7 1 23 1613 1635 1613 1635 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.3	3.9e+02	2.5	3.9	1	23	193	215	193	215	0.97
2	18	0.002	0.15	13.2	1.0	2	23	221	242	220	242	0.97
3	18	2.5	1.9e+02	3.5	1.5	1	23	248	270	248	271	0.94
4	18	0.21	15	6.9	3.4	2	22	506	526	505	526	0.95
5	18	5.8	4.3e+02	2.3	0.4	1	20	624	643	624	646	0.70
6	18	0.64	47	5.4	0.4	2	23	781	802	780	802	0.96
7	18	0.091	6.7	8.0	1.0	3	23	882	902	881	902	0.98
8	18	0.037	2.7	9.3	0.5	1	23	910	932	910	932	0.97
9	18	0.15	11	7.4	3.4	1	23	971	993	971	993	0.95
10	18	0.00029	0.021	15.9	4.0	1	23	1001	1023	1001	1023	0.99
11	18	1.1	83	4.6	1.0	1	23	1181	1203	1181	1203	0.95
12	18	0.0077	0.56	11.4	0.1	1	23	1209	1231	1209	1231	0.97
13	18	0.0096	0.7	11.1	1.6	1	23	1297	1319	1297	1319	0.95
14	18	0.034	2.5	9.4	0.9	1	23	1325	1347	1325	1347	0.92
15	18	0.008	0.58	11.4	2.6	1	23	1438	1460	1438	1460	0.97
16	18	0.0002	0.015	16.4	1.4	1	23	1466	1488	1466	1488	0.99
17	18	0.37	27	6.1	2.0	1	23	1580	1602	1580	1602	0.96
18	18	0.0035	0.26	12.5	3.7	1	23	1613	1635	1613	1635	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCTGAGCGCGCAAGTCGGCGAGGTCACAGCTATCGCGCGCCCTCCCTTCGAAGGCCGCCTCTGCTTGGACGTCCTTTCGGAGGCATCGTCCGACGCGGCGGAAGATTTTGAATTGCCGCATTGCAAGATAAGAAGGAACTATAACTGTGCGAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTTTTGCACACGCGTGACGTTCACTTCGGTAGGTTCAAGATATACGATTGTCAACATTGTATGTATGCTTCGCAACATCACCAGAAGCTCCTGAGACATATGAAGATGGTGCACGGAGGATTATCCGCGCCCTCGTCATCGACCGCCAGGACGGAGGTGGAGCGCCCCATCGTAATCAGACCAGAGCCGGAGCCCGTCGCGCCCAACAGCCCTGAGTACAACGAGCGAATGGAGGATTTACTAGAAGAAATCGAAGAATGTGACGATATACAGATAGACGAAGACGACGACGACCAGTCCAACCGGATGGAAGACAGCGATCCCAGGGGCTCTAATTCCTCGAGACCCAAAGGAAAGGGCAAATTTTTCTCTTGTGACAAATGCAACTACGTCACCCACATAAAGGCGAGATATACTAAGCACGTCAAATACCACTCGATGCCGATGATCAAGTGCACTATGTGCGACTTCCGCACCCCGTACAAGTGGAATTTGGATCGTCACATGAAGAATCACGGCGGGACCGGAAGCTTCGTGTGTTCGAAATGCACCTTTACAGCGGACATCAAGCAGAGTTTGACCGTACACGAAATGAATCATCACACGCCGCCGGTGGGGCACGGTGGGAGCCGCCGCCGCAACCGGGTGGGCGCCAGTGACATGACGGCCGCCGACCCGATGGGCACGCTGCTCCCCAAGGAGGAGGAAGGGAGCGCCGACTCGCACTCCTCACACTCGGCCTCGGACATCATGGGGTTACAATACGCAGAGAGGGACATAGTGAGCTGCAATAGCGATTCAAACGACGCGAGCTCGTCGCATGCCGACGACGCGCATCGAGACGGAACACAAGACGCCTCCGGCCAGCACTCGCCTGGTTCCGCGACCGACGACCCAAAGTCACAAAAACAGAGCAGGAAGGCCCCCCGGCCAATACCGCAACTCATCCCACTGAACGCGTCTACTCCTAATCAAAAAACATCCGGCGAGCCACCGGCCAAAAAGTTTAAAGAATCAACGAGCTCCGAATTCATCGGAAAGTTTGAAAACTTACCGGAAGATATAACTTTGATACCCGTTAATTTGCCCCCCAAAGAAACTACAGCTCGCAAGAAAAACCATTCCTTTTTTGACAAATTAAAGGAAAGGCTCTTGACTGAAACGGGCGAAGAAGGATCGCTGAAATGCAAGAACTGCGGTTTTGAAAGCAAATGTCTGTCGGAACATTCCGTGCACGAAAAAAATTGCTCCACTCAGGCCAATCGTATTACGATGAATACGGCGCTTCCAACTAAGGGCTCGACTCGTTGCCAAAACTGTAGACACAGATGTAAATCCAGCGCAGACTTGTATGTGCACATGCAAACTTGTGGAAAGAAAGACAACGTTTCTACAGAAACTGTCACAAACACTAAATATAAGAATGAAGCATCCACTTCACAAATTGAAAAGGAAGCGGAACCACATCCTATGGAAAACGTTGTTTTCGTCTGGAACAATATCAATCAAGAGACCAACAAATTCGACAGACCTTTAGATATCAACATTAACGACGATTCATCAATTACTGACCTAAATAGACATTACGACACCGAAACTGTAGACGAGAATGAGGGCATGAACTTGTCACCAAACAGTTTGAGTCTCGGGAAGAACGTATACAAATGCCCAGATTGTAAATTTTGGGCTGCCACCGCATCCAGATTTCATGTGCATATCGTCGGCCACTTAAACAAAAAGCCCTTCGAATGTTCCCTATGCAAATATAAATCCAATTGGCGATGGGATATCACTAAACACATTAAGTTGAAATCTGCCAGGGACCCAGAGCACAACGACGCCAAAGTACTAATGACAGATGAAACCGGCAGAAGAAACTATAGTAAGTACAACAAATTCTTGGCTGTGCCAGTTCTAAATGAAAATGGCGAAAACGATTTCCACTACATAGATCCAAATACGACTCTGGATGCGTCCATGGAAGTAGATGAATCGTACGGCAATGAGACGACTGACATGATGCACGTGTCATACGAGATGCAGCCGCTCAACCTTCAAACTCAAACCACTGATAAATATCACATGGATAATAGGAATACGGACAGTAAAAAGCCTAAGAAAACATTATGGAAATGCAAAAAGTGCAATTATAAGGATCCATCGAAAGAAGCGTTGCTAGAGCACGTGAGACAACACTCGAGAGAGGGCGGAGATGATGCTCCTCAAAGTAACAACAAGAAACTCGAAAATGCTCCTGATCCCGCGGATTTGGCATACCGTTGTGGACACTGCAATCAGCTTTCTAACTGGAAACACGTCATACAGAGGCACTGCCGTTTGAAGCACGACGGAATCATCAAAGTCATCACCACAGTGAAACCTAAACCAGATCCGTCTCAAGTACCAGGCAACGAGGGCTCGTACAGCGACCTTTGTACGAAGTGCCCATTCAAGGCTAATGACAAGAAACAACTCCAAGAACATTTGCAACAGCATCAGCCGTCTCCAGAATCCATCTTCAAATGCTATTTCTGCCCTTACTTTGTCAAAGATGAACAAGACTTGATCCAGCATCTCTTGTTACATGGAATAACTGACCCAGAGGATTATATCTCTAAAGCGATGGGCTGCAGATCTCCATTACCAGACCGAATTCTTACCAACTCCGATTTACCGCCACCGAGTAATACAACGAAACGTCACAAATGTACTGAATGTCCTTACGAAACAAACAGCAAATCTCAATACATGTATCATGAACAATTTCACAGGCTTCCGGCAGACACACCCTACAAGTGCCCAGAATGCAATTATAGCGTATCAAAGAGACATTTACTTCACCAACACCTTAGAGTACACGGGATTCATCCATTATTGGACCGAAAGAAAAATGAGTCAGAAGCAGAATTGGAAGCAAATATGGCTTCTAAAATCAAACTAGAGTTTGCGGATGATTTGCCTTTTGTTTGGGTTTCAGCTAGGGATGAATTTCATAAAATGTACAAGTGTCGCTATTGCTCTTATGTCAATTCTCAGAAATGTAAGTTACCAAACCACGAAAAAATTCATTGCCTAGAATTTGAAAATAGTGatgtaattatttacaaatgttTAGAATGTAAATTTACATGTGATGACCCTGAAAAAGGTGCGGAACATTCCAAAAAGCATGGCCTGTTGTATGGTCGCATCTACAGCTATGTAGAAGATAATATTCCTGATGAGGACCAAATTGCTAAATTACGCAGGATCATCGAACAAGAAAAGGCTGTAGAGGAATCTACAAAAGACGATAATGCGACTGCCGAAtcacctgaaaataaaattatgttttactgTCGGAAATGTCCAGCTAATTATTTCAATGAAAGTGAAATAAAAGTCCATGAAAAATTCCATGACCGTACTTTGGAATACAAATGTAAGATCTGTGAGTTCTCAGTGCCAGATGAAACAGAACTGACGGCTCACGAAACTGTGCACTCGGATGATTACCATATCAGGACAAATATGCATAAATTCGTTCATAACTACCACTCGCTTTACAAACCACCTCGACTGGAATTTATCCGTAGTTCCGAATCTTCAGCAACATTGTGGAAAGTGGTAGTAAATAAACCTGTTGAACACGTGGAGCATGTTCATAAGAAATCAGAGTCAAAACATACACCAAAACAATATCATTGCAAAGAATGTCCAGCCAAATTTTTCAAAAGTTCCGCACTCTCTTACCACATGGGGTTACATGGTGGGGAAGGCgaacataaatgtaaaaaatgcaGTTATGCTGTCAAAAACGTTGGTAATTTAGCCAAACATGAAGTATTGCACGACATCGAAAACAAGCCATCCGATCGCTGCGATTATGACTCCGGTGAAGATATGGATTACAAAAATGTTCCCCTCTCTGGGACAGATTTATTCCAAAGAAAGACTGAAGCTATTAAAAGAGTATTGACTGACAAAGATAAACTGGTCAGACCTAACGACCACTTTCCACCCGTACTCCAAGCTGACCCCCAATTCGGTTATCTCATGCATGGTAATCCTGAATTCATTTACCCTACATATTTGAAAAATGGACGGCAAAAAGAAAAAAGGTATAAATGCCACAAATGCCCATCAGCATTCGAAAAGAGAGAACAATACAAGATACATCTATCCCTCCATGGCTCGAAACAAAGATACAAGTGCGAACTGTGCGATTATTCTGTAAAGTATTACGCAAATTACGTGCAACACATGAGGAAACATCAAATGAACGATGAAGCTGTAGCAGAAAGGAAGAAGGGCAATAGTGGTTTTATCGAACCTGATAATCAAGAAGACGAGAAAAAAGACGATAGCGCGGATAACATCAAATTAGCGATCAAAACTATGCCCAAAGGCGCGCCCAAAACAGATTTCCAGCAGTTCTCAATTAGAGACCAGCAAACCCTGCGACTATTACAGCGGAGGAGGTCCATGAATGCCGGCGGCAAAGACGCAGGCTCCAAAGAAACCTCGCCGGCAAAAGAACGCAAATTGCACATGTGTCTTCTGTGTCCGTACACCAACCAACGGCAGGACGCTCTGAACAATCACTACAGGAGACATGATGCCGCCGATATTCTTAATATCGGAAACCATAAATGCTCTTACTGCGACCTAGTCGTCGttcaatcacatttcctacgtGACCATTTAAAAACTCATTTCAGTTATCATAAAACTCTGACACCTGAATGTTTCGTTGCTAATGAAAATGTGACTTTCACTATTAGCAAATTTGATGAAGAAAGCGAACCTCTTGATCTCAAACTAGACGTTAAAggcaaaattatattcaatgATGAAAAGATGTTTGTAAATATCAAAACTGGCGAAGTTATCGTGGAATAG
Protein Sequence: MLQQMSSPLSAQVGEVTAIARPPFEGRLCLDVLSEASSDAAEDFELPHCKIRRNYNCAKCTFYTQNPRAYLLHTRDVHFGRFKIYDCQHCMYASQHHQKLLRHMKMVHGGLSAPSSSTARTEVERPIVIRPEPEPVAPNSPEYNERMEDLLEEIEECDDIQIDEDDDDQSNRMEDSDPRGSNSSRPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGTGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGHGGSRRRNRVGASDMTAADPMGTLLPKEEEGSADSHSSHSASDIMGLQYAERDIVSCNSDSNDASSSHADDAHRDGTQDASGQHSPGSATDDPKSQKQSRKAPRPIPQLIPLNASTPNQKTSGEPPAKKFKESTSSEFIGKFENLPEDITLIPVNLPPKETTARKKNHSFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCSTQANRITMNTALPTKGSTRCQNCRHRCKSSADLYVHMQTCGKKDNVSTETVTNTKYKNEASTSQIEKEAEPHPMENVVFVWNNINQETNKFDRPLDININDDSSITDLNRHYDTETVDENEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVLNENGENDFHYIDPNTTLDASMEVDESYGNETTDMMHVSYEMQPLNLQTQTTDKYHMDNRNTDSKKPKKTLWKCKKCNYKDPSKEALLEHVRQHSREGGDDAPQSNNKKLENAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPSQVPGNEGSYSDLCTKCPFKANDKKQLQEHLQQHQPSPESIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYISKAMGCRSPLPDRILTNSDLPPPSNTTKRHKCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIHPLLDRKKNESEAELEANMASKIKLEFADDLPFVWVSARDEFHKMYKCRYCSYVNSQKCKLPNHEKIHCLEFENSDVIIYKCLECKFTCDDPEKGAEHSKKHGLLYGRIYSYVEDNIPDEDQIAKLRRIIEQEKAVEESTKDDNATAESPENKIMFYCRKCPANYFNESEIKVHEKFHDRTLEYKCKICEFSVPDETELTAHETVHSDDYHIRTNMHKFVHNYHSLYKPPRLEFIRSSESSATLWKVVVNKPVEHVEHVHKKSESKHTPKQYHCKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHEVLHDIENKPSDRCDYDSGEDMDYKNVPLSGTDLFQRKTEAIKRVLTDKDKLVRPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAVAERKKGNSGFIEPDNQEDEKKDDSADNIKLAIKTMPKGAPKTDFQQFSIRDQQTLRLLQRRRSMNAGGKDAGSKETSPAKERKLHMCLLCPYTNQRQDALNNHYRRHDAADILNIGNHKCSYCDLVVVQSHFLRDHLKTHFSYHKTLTPECFVANENVTFTISKFDEESEPLDLKLDVKGKIIFNDEKMFVNIKTGEVIVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00927143;
90% Identity: iTF_00034348;
80% Identity: -