Amar018645.1
Basic Information
- Insect
- Agriopis marginaria
- Gene Symbol
- dl
- Assembly
- GCA_932301435.1
- Location
- CAKOAR010000209.1:670908-677103[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-38 9.2e-35 120.4 0.1 1 167 37 216 37 218 0.92 2 2 0.27 1.2e+03 -0.4 0.0 73 107 343 377 336 383 0.82
Sequence Information
- Coding Sequence
- ATGCCATCACCGGTCCATGGTGGAGCGAGTTCATCGAACGACAACGTCGCAGTGCCTTCCTCACATTCCGTGGAACGCCCGCCGGTACAGCCTAGCCCCGGGCCGTCTGTGAAGATAATCGAGCAGCCAACACCTTTAGTAAGATTTCGATATAAGCCTGAGAACCGAGGGGGTCCGATTCCTGGTATTTGCAGCACGCCAGACCATCCGACATATCCCACAATCAGCATACACAACCACATCGGGCCCGCACTCATCGTTGTGTCTTGCGTCACCGCAGATAGACCATACAAGGTGCACCCGCACAACTTGTTCATCGGAAAGAACTCGAACAACGATAGTATTGATGGCATAGTTGCGGTCAAGCAGATGATCAAGAAGAATAACAATGTGGTGGAGCTTAAAAAGATTAAAATTCAGTGCGTCAAGTGGCCTGAAGTCCAAGATGGCATGCAGCGACGTAAGCACTTGCGCGTACCGGAGCTTCACGCATTGGAAATCGACCCCTTCCGCCAGGGATTCGACTACTGCAGAAATCGTCAAAGCATAGACCTGAACAAGGTGCGGCTGGCGTTCCAAGTGTTCGTGCGTCACAATGACAATGAGCCGTGGAACGCGCTGGGGCCCGTCGTTTCAGAAACGATTTCTAAGGCCCCAGGAGTCCCAGGCCAAGGGCCAAGGAGCTGCCCTTCCACGGTGCCTGACATAAAATGCGCTTCACACGACTCTGGCACAACGGCAGGCGGTACAAAGATGATTATCTTGCTCTCTGAAATGATAGATATCAATGACATGGATGTGGTGTTCTACGAGAGAGGTGACGCAAAACAAACGGTGTGGACGGCGGCAGCGACCATGGAGTTGGTGTTCACTGATAATATAGCTATAGTACTTAAGACGCCGCCCTACTCTGGGCAGTCCCTCGACGACCGTATCAGTGTGTATTTCAACTTATACAAGCGATCCGTCAACCAATGCAGTAGGTCGTTGCCCTTCAACTACATCTCCGAGTTCCGAGTAAGCGAGCGCTCGTCAAAGGACAAGGGTAAAACAATAAAAGTGCGCGTGCGTCGAGCGGCACCAAACTTCGAAGAGGTGGGCATAGCGACGCCGACAAAGGAGAAGACGGAGGCTGGCGACACTGACAAGGGCCTAAACGACTTCCTCGCGCAGCTCTCCATAAAATCTTATTAG
- Protein Sequence
- MPSPVHGGASSSNDNVAVPSSHSVERPPVQPSPGPSVKIIEQPTPLVRFRYKPENRGGPIPGICSTPDHPTYPTISIHNHIGPALIVVSCVTADRPYKVHPHNLFIGKNSNNDSIDGIVAVKQMIKKNNNVVELKKIKIQCVKWPEVQDGMQRRKHLRVPELHALEIDPFRQGFDYCRNRQSIDLNKVRLAFQVFVRHNDNEPWNALGPVVSETISKAPGVPGQGPRSCPSTVPDIKCASHDSGTTAGGTKMIILLSEMIDINDMDVVFYERGDAKQTVWTAAATMELVFTDNIAIVLKTPPYSGQSLDDRISVYFNLYKRSVNQCSRSLPFNYISEFRVSERSSKDKGKTIKVRVRRAAPNFEEVGIATPTKEKTEAGDTDKGLNDFLAQLSIKSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -