Basic Information

Insect: Agriopis leucophaearia
Gene Symbol: -
Assembly: GCA_949125355.1
Location: OX421275.1:7117890-7136097[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00045 0.033 15.3 0.2 2 23 139 160 138 160 0.93

2 11 0.00065 0.048 14.8 2.4 1 23 166 188 166 188 0.96

3 11 0.00015 0.011 16.8 0.1 1 23 277 299 277 299 0.98

4 11 4 2.9e+02 2.9 0.1 3 23 307 328 305 328 0.91

5 11 0.00057 0.042 15.0 0.0 3 23 379 400 377 400 0.90

6 11 0.059 4.3 8.6 0.3 1 23 410 432 410 432 0.94

7 11 3.5e-05 0.0026 18.8 0.2 1 23 463 485 463 485 0.98

8 11 0.0007 0.051 14.7 0.2 1 23 491 513 491 513 0.97

9 11 0.0004 0.029 15.5 0.3 1 23 519 541 519 542 0.95

10 11 0.0071 0.52 11.5 1.0 1 23 555 577 555 577 0.95

11 11 0.0015 0.11 13.6 0.1 1 20 714 733 714 736 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00045	0.033	15.3	0.2	2	23	139	160	138	160	0.93
2	11	0.00065	0.048	14.8	2.4	1	23	166	188	166	188	0.96
3	11	0.00015	0.011	16.8	0.1	1	23	277	299	277	299	0.98
4	11	4	2.9e+02	2.9	0.1	3	23	307	328	305	328	0.91
5	11	0.00057	0.042	15.0	0.0	3	23	379	400	377	400	0.90
6	11	0.059	4.3	8.6	0.3	1	23	410	432	410	432	0.94
7	11	3.5e-05	0.0026	18.8	0.2	1	23	463	485	463	485	0.98
8	11	0.0007	0.051	14.7	0.2	1	23	491	513	491	513	0.97
9	11	0.0004	0.029	15.5	0.3	1	23	519	541	519	542	0.95
10	11	0.0071	0.52	11.5	1.0	1	23	555	577	555	577	0.95
11	11	0.0015	0.11	13.6	0.1	1	20	714	733	714	736	0.93

Sequence Information

Coding Sequence: ATGGACGGCGACAGAGAATTCAACCTCCACTGGGGAGGGGAGGTTGTGGTGAAGCATGATCCAGACACAGTTACAAATGAAGTGATATGTGGATATGATAATGTTCACAATTCTTCATTTTCTAACATGACATCAGAAGAAATGATAACTAACACGGACCAAATGGCAGCAGAGAACTTGATGTTTCTCTCTCAAGATGTTGTCGGTTACACGGAGACAGCTGAGCTGGCCGACGATCCTAATGTTGAGTGTGTTACTGAGGAAGTCATCACTGATGATTGGGTCGGTGGACAAGAGAGAATGGAAGTTCCTATAGAACATTTTACACATCCCATGTTAGAGCCAAAACTGGAGAATGATATTGACGTACCATTACCTACTGATCAGGACGAGTACACAGCAATGCGGCCGTGGCCATGCGACTTTTGTTCACGTCGGTTTCGCAAGAAGGCAGCGCTTATGAACCACATGGTTGCACATCAGAACGATCGACCTCACGCGTGCAACCTCTGCGGCGTCCGCTACGTCCGCAAGTGTGACCTCATGAACCACCTCAAAGTGCACGCCTTTGTGCCCGACGACGCCGACTCACAGGATATCGAAGACATGCTAGAAAACAACCAAATCTTAAAACCAAAGAAAAAACGCGGTCGACGGAAAAAGGCTCCGGAACCCGAGGAGGACTCGTGGGAGAACATGACGTCGGCGCGCACGCAGCAGTGGtcgcggcgcgcgcgcacgccCCGCCCGCCGCCCGTGCCTTCctcgccgccgcccgcgccgcagCCCCcctcgccgccgccgccgcccgccgacCCTGCCCGCCCCTTCGTCTGCCGGACGTGTGGCATTGGCTTCGCCAGGGAGAAGGCGCTGCAGTCGCACGCCAGAGTGCACGGTGGTGATTCCCCGATAGATTGCGGCGAGTGCGGCGAGCTGTGCTGGTCGCGCGATGCGCTGGCGCAGCACACGGCGATGCGCCACCCTCACGCGGTGCCGTGCTCCGTCCCAGCAGACACATTCAATGACTCAGACTCTGGAGATGACATGGAGTACCGGCTATCGCCCGAGTCTCAGCCAAGCGGGGGCACCGAACGTGCAGTATTCGACACGATGCGAGGCCCCGAGCTGTTCTGTTCAGATTGCGGTGTCGCGTTCCAACGTGCTGACTTGCTGAGGAGACACGTTGCTGCTGCGCATAGCTACGTGCGAGGCACGGGCGGCGAGCACACGTGCGGCGTGTGCGGCGAGCGCTGCACGGGTGCGCTGCAGCTGCTGGCGCACGCCGAGCTGCACGCTGACCGGCACGCCGACCGCCTCGCGCCCAGGATAAAAGCAAAATCACGCGGTCGTAACAGCACATCAATATCGAGCAATTCCCGACAATTTCCGTGTAGAGAATGTGGTAAAGTGTTCGGGTCACGCAGTTCTCAACAGATCCATGTCCGGATCCATACTGGCGAGCGTCCGTACGCTTGCCGCTTCTGTTGGAAGGCGTTCGCGGACGGTGGCACGCTGCGGAAGCACGAGCGGATACATacagGCGAGAAGCCGTACGCATGCGCCGTGTGCCCACGCGCATTCAACCAGCGCGTCGTGCTCAGAGAACATGTGCGCTCGCATCACTCGGCGCCCGACCGCAGAGCCAACGGTGGTCCCGCGTACTGCTGCGTAGTTTGCGGGCGCACGCTGCACTCCAGCTCGGAACTGGTGCTGCATCTCATAGAGCACTGCGACGCTAACACGGCACTGAAGAGACAGCCTCAGGCCGGCCCCCGTAAATATAAGCGAAGACGGAAAGTGAAGAGCGAAGTGTCGCCGGCGCGGCGCGACTGGCGCACACCCTCGCCGTTGCCGTCCCACTCGCCCTCGCCTGCACGCACCCCGTCGCCCCCGCCGGTGGAGTCGCCGCCCCcgcgccgccggcgccgccgcgAGCCGCCGCCTCGACCGCGCATGATACACACCGAGGAACCGAAGACTAGAAGTAAACAGCTCCGTCAGCGACGGCCGCCGCGGCACCCCGCAGACGACCTGCGTGCCATCGGCCCTCACTCACCGTCCCCCAAACGTGAGCCCCTCTCTCCGCCTCGCCAGGAGACTCCGCCCCCGGCCGATGAAGCCGAGCCGGGCTTTTTATACAAATGTGAGATGTGCTCAGAAGAGTTCAAACAGCGAGAGGACTTGCTTCTCCACGTGCCCGTGCATATATGA
Protein Sequence: MDGDREFNLHWGGEVVVKHDPDTVTNEVICGYDNVHNSSFSNMTSEEMITNTDQMAAENLMFLSQDVVGYTETAELADDPNVECVTEEVITDDWVGGQERMEVPIEHFTHPMLEPKLENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMNHLKVHAFVPDDADSQDIEDMLENNQILKPKKKRGRRKKAPEPEEDSWENMTSARTQQWSRRARTPRPPPVPSSPPPAPQPPSPPPPPADPARPFVCRTCGIGFAREKALQSHARVHGGDSPIDCGECGELCWSRDALAQHTAMRHPHAVPCSVPADTFNDSDSGDDMEYRLSPESQPSGGTERAVFDTMRGPELFCSDCGVAFQRADLLRRHVAAAHSYVRGTGGEHTCGVCGERCTGALQLLAHAELHADRHADRLAPRIKAKSRGRNSTSISSNSRQFPCRECGKVFGSRSSQQIHVRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGPAYCCVVCGRTLHSSSELVLHLIEHCDANTALKRQPQAGPRKYKRRRKVKSEVSPARRDWRTPSPLPSHSPSPARTPSPPPVESPPPRRRRRREPPPRPRMIHTEEPKTRSKQLRQRRPPRHPADDLRAIGPHSPSPKREPLSPPRQETPPPADEAEPGFLYKCEMCSEEFKQREDLLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143273;
90% Identity: iTF_00207217;
80% Identity: -