Aleu005435.1
Basic Information
- Insect
- Agriopis leucophaearia
- Gene Symbol
- -
- Assembly
- GCA_949125355.1
- Location
- OX421265.1:13755199-13770047[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.013 0.93 10.7 0.9 3 23 209 230 208 230 0.90 2 24 1.7 1.2e+02 4.1 0.1 6 23 587 606 587 606 0.90 3 24 0.033 2.4 9.4 0.3 1 21 611 631 611 632 0.96 4 24 5.7 4.1e+02 2.4 0.2 1 23 673 696 673 696 0.89 5 24 0.00038 0.028 15.5 1.5 3 22 707 726 707 726 0.96 6 24 0.23 17 6.8 0.2 3 23 735 756 733 756 0.95 7 24 0.32 24 6.3 0.8 3 23 777 798 775 798 0.93 8 24 0.0025 0.19 12.9 1.3 1 23 804 827 804 827 0.92 9 24 0.11 8.3 7.7 0.0 1 23 853 876 853 876 0.90 10 24 0.005 0.36 12.0 3.5 1 23 881 903 881 903 0.97 11 24 0.0042 0.31 12.2 0.3 1 23 909 932 909 932 0.95 12 24 0.0027 0.2 12.8 1.5 1 23 940 962 940 962 0.97 13 24 0.00016 0.012 16.7 1.8 1 23 1011 1034 1011 1034 0.97 14 24 0.0035 0.25 12.5 1.2 1 23 1094 1117 1094 1117 0.96 15 24 0.006 0.44 11.8 1.5 2 23 1142 1164 1141 1164 0.95 16 24 0.26 19 6.6 0.1 3 23 1171 1192 1170 1192 0.94 17 24 0.009 0.66 11.2 0.2 1 21 1236 1256 1236 1257 0.95 18 24 0.0011 0.082 14.1 0.6 1 23 1267 1289 1267 1289 0.93 19 24 9.8e-05 0.0072 17.4 0.4 2 23 1385 1407 1384 1407 0.93 20 24 6.9e-07 5.1e-05 24.1 1.3 3 23 1414 1434 1413 1434 0.98 21 24 0.0035 0.26 12.5 1.0 1 23 1451 1473 1451 1474 0.95 22 24 0.19 14 7.0 0.0 1 23 1495 1517 1495 1517 0.98 23 24 0.025 1.8 9.8 0.6 1 23 1523 1546 1523 1546 0.95 24 24 0.00023 0.017 16.2 0.4 1 23 1554 1577 1554 1577 0.96
Sequence Information
- Coding Sequence
- ATGAATGTAAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAACCTTCCGTCCTCGTCACTAGAATCAAGGATTGCGTGTCGGTCCAGataaACGAAAATGACGAACTGCCGACGAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATATATTCAAAACTGTTTGTGGAAAGACACAAAATAAACTACAGTCTCTGATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAATAAAGAGTGAACCTGATTATGATGAGGTTTATGATGATGGAGTGGTCATTGATGGTTCCTATCCTATCATTGAGAATGTGGCCTCAACTAGTAAGCTCCAGCCTGAAGGCCCTCCGATCCTGGCCTCCCTGGGGCTCACACCAAGGAGTGATAAGGGGGTGGAAAGCGAGAACAACGAAGAGGAGGAATTTGACGAAGAGATGGCTGAGCCTGAACCACCTCAGCCGGTGAAGGTCCCAAACATGCCCGAAGTATCCATCACAGTGATGCGCAATACTGGCGAGACGCTCCACGCGAGGCAAGGCATACAACAACTCGCTTCCAAGGACTGTCTTATCTGCGGGAGAACATATAGGTACTCCCACAATGCTCGCAGACACGAACTAGCGTCCCACAGCTTCGATCGCTACACCAACAAAGTGACAAACAAAAAGTCGCATCACTCCCGCATGATGCCTAAACTCAGACCAAACCCCTTCAACCCAAAAGCTCGTCTCATGCCCAATCCAATTAGCCATAAACTACAATTCATGCCCAAACATATTCCTGCCAAAATAATACCACACAAAGTCAACCCCCCACCGAAACCGATTCCCATAAAAACTCTTAAGGCATCTCAAAATAATCTACCGTATCCTTTACGCATTAAAGCGCTCAAAGACTTACAGATAAAGAAAAAAGAACCGCAAATTTTGAAGACGTTGCTCACAGCTAAACCCGAGGTGTTGGTGTCGGAGCCGGAAATAATGAATTCCGGTCCGGAAAGTCCAGAGACGCTGATATCTGAGCCGGAGATCGCGTCTTTTCAGGTAGAGGCTATTCTATCGGAGCCTAATGAATATGAACCTAATCCAAAGGAAGAAGGTGAATTGGAACTTGACAATCAGACCCTAAATTATGACACTGTCGATATGGAATCAGATCACGAGATTGAAATAGCTCGACAGCAAGAAAGTGAAACTGTGGAAAATATTGAGTGTGTAGAAAATAACGACGAGCATGTGAATCAAGAGCAGGATCAAGATAATCATGTCGATGAGATTGATAAGCCTGAAGAAATCGAGAATGAAGAAGACCAGGATACCGGTGACAGCCAGGCAAATATGGAGATTGATGAAAGCTGCACACACGCGAACATCGATGATATAGGCAAGATAGATAAAGAAGAGCATCTTGAGGAGCACGATGAACAAGAAGTAAATCCCGAGGCGGATGAACATGATAATGACGAAGACATGCCCCCGCCCCCCGTTGTGGAACTAAACGAGGAAGTGCAGCATTCATCGAGTGAAATTAACGAGGAGGATGAAGAACTCGATGGAACGGCTGATCTCAATGAAACGGTCGACCACAAGCCGACAGAACTTGACCCAGACAAGACATACGTCACCAAATCTCAAAAGGACTTTATCGAAAAGTATCGTGATGTCATCCAACAGATCAATACAAAGAGATGCATCTGCTGCGATAAGACATACCCGCGCAGGAAAGCGGTCGTTCAGCATCTGCAGAAAAATGGACACAAAGTTCCTAAACATACGTGTTACAATTGCGTGATTACGTTCACTCATATCGGAGCGCTGCTCAGTCACATGCGAGCGAATGCTTGCACGGATCTTTGGAAAATCGTATTTGATAAAAATGGTATTCCCGACGATATGGTCATCAAATATGAGCCTCAGGCTAAGATCCAATCTAAGGATATTTTCAACGCACGTTCTTACGCATGCAGACTATGCCCGGCCAAGTTCCAATTGAAGCAATCCATAATGAAACATGTATTAGATGTGCATGAAGATGGCCAGTCAAATATCCCCCTTGGGTGTGTTCACTGCCGCACCAGCTTCAAAGACAGATCACTCCTCAAGAAACATATTCGCGTCGGCGAATGCACGGTTTACATCAACTGTGATCTGTGTTCGGAACAGTTTTCGAACATGCAAGACTTCAGCGATCACGCTCTGACGGTCCACGCTGAACATTTCGTGAAGTCCGACAACCAGAACAAATGTATCGACGGTCGGGCCACCGACTGTTCCCTCTGCGGAAAGAAGAACAGCAACTACTTGAATCTTGTGAAGCATCTGAAGTTCGTTCACAACGAAGACAGACCGCATTACTGTCAGAATTGCGATGCCAAGTTTGAACATGCCGCTGACCTGAATAAACACATTTATGCTGAACATTCTGATCAAGCGTTGGGGCTGACGCCCCACGAGCCGGACATGTCTCTCGTGAAAGAAGAAGCCGAGGAGTATCATTATTCGTGCACAGAATGTAACGCGATATTCGAAACTGTAGACGCCTGGACGGACCACCAAGTGGCGGAACACAACCAAGTCGCTCATCACTGCGATCAGTGCGACAAGAAGTTCTTGCGACCGTCAGAACTAGCCGAACACAAAAATACCCACCTGAGAGTCAAGTTCTATTCTTGCAGTATATGCCCAAATTCATACAGTACTCCTCAAAAGTTGTCTGATCATGTTCAACAGTCTCACCCTATTGGCGGCGAAACTGAGTTCTTCTGCGATGTGTGCATTCGATCGTTCAAAAGTCGTCAGGCCTTCTCCAACCACATGCGTATCCACGCTAAAGTGCCGACTACAAACAGAAAGCCGGGTGAACAGAAAGGATTCGACCCACGAATTATTGGCAAGCCGGTCAAACAATTCACCATGGTCCAACCCGGTTTCGTCAACTTCAAGCCAAATGCGAATGTTCCTAACGCACCTTACTCGTGTGATATTTGCGGTAAAGGCTTCATGCACAAGAAAAACATATGGAAACACAAGAAAGTGTTGCACGCGGACATTATTAATGATAGGAACGATAGCGAGGAGAACACGATGCAGGCTTCCACGGAAGATGACGATTACAATCCCGATGAGAATGGAGCTCTTTCCACTCCGCAGTTCAATAGCTTTAACTTCTCCAATTTCAGTAATAGCACGCCTCAGCAACAGCAGCAAGATTCCATGCCGTTTTCTTGCGAACTATGTTCCAAGAGGTTCCCAATCAGAACCAGTCTGTGGAAGCACAAACGCGCTAAACACGGGATCGTAAACCCCGGTGCTAGCGCCGGCAACGAAACACCTGCGCAACCGAAGTCAGAATCCAGTCGATCTAGTTGCACAATTTGCAAAATAAATTTCGCAGACAAGAAATCTTACTACCGACACAGGAAGAACGTTCACAAAACTGCCACGGAGATGTGCAAACTTTGCGGTAAACCGCTAAATTCGACCTTAGAACTGTACGAACATCTAAAAGCTGCACACGCGCGGGAATTGCTCGGATATAACGCCAATCAAGGCTCGAGTAAAACGCAGGAGGTGTCTCAGGAACAAGATGTTGAATACGAAAATGAAACGGAATCCGCAGACCCCAGTATGGACTATCAGGCTCGGTACCCGTGCGATACTTGCGGGAAACAGTTCGTGGGTCTGCTAGCTTTACAGAACCACCAGTGTATAAACCAGCTCCCATCACAACCGCAGACCTTCGACTGCGAAATCTGCCACAAAAGCTACACGTCTATCGCCGCATTGAAGAGTCACCGCGGTTGGCACTTGCGCTCCCCGGACGGTAAAGCGGCTGCCAACAACAGCGGGCTTTGGATGCCGCAACACAAAGTGACGAGTAAGGTCAGCAAACACGAGGTCGTTGACGTGGTACAGTTGGCTCGAGTTTCACATTCTACCCCCTCTTCACATTCAGCGCCCGCTGCGGCCGTCACGGCCAAGAGGAGATTACCACCAGAAGTAGAAGTGACAGTCGTTAATCCCAACAAAAAGATGCGTTCCGACGACTCGGTCGAACTGGATCAACAGAACCACGAAGTAGCTGACGGGAAATACTGTACCATCTGCGACAAAGAATTTACAAAGCGCGCTGCTTATCAGCGTCACATGGACGAGGTTCACCAACCGAATTCCGTTTTCTGTCCTGTCTGCGATAGAAGTTTCACGAGGAAGTCGACGCTTCTCGTGCATATGAAGAAGCATTATGAGGGCGGGGAGAGCTCGTCTACCGTGCAGATGGAGGAGGAAGGTCACAGTTGTGACGTTTGCGGCGCTATCTTTGAAAGCGAGAAGGGGTTGAGAGTTCACCGGGAGAGGCATCACGCGGAGGACTCAGAGCAGTCTGAAGACGACGGTAATGCCCCAGCAGCGCCGCCGGGAGAGTTCACGTGCGGTCAATGCGGCGACGGTGTTGCCAGCCCGCGCGATTTACTCGCTCACCGCTCAATGCACGCAACTCCCACCAAATTCTTCTGCAATATTTGCAAGGTCTACTTCGCGCGAGCTCTGGATCTCTCCTCGCACACTCGCGCGAGACACGCGGACAACGAAAAAGTGTTCTTTCCCTGTGCCATGTGTGACCGCTTTTACATGAACAAGAAGAGCTTGCAGCGGCACATTGAAATGGCACATTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSSDDTEPSVLVTRIKDCVSVQINENDELPTNVCRKCMDNVNNWHIFKTVCGKTQNKLQSLIKKDGSLLEEVKIKSEPDYDEVYDDGVVIDGSYPIIENVASTSKLQPEGPPILASLGLTPRSDKGVESENNEEEEFDEEMAEPEPPQPVKVPNMPEVSITVMRNTGETLHARQGIQQLASKDCLICGRTYRYSHNARRHELASHSFDRYTNKVTNKKSHHSRMMPKLRPNPFNPKARLMPNPISHKLQFMPKHIPAKIIPHKVNPPPKPIPIKTLKASQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNEYEPNPKEEGELELDNQTLNYDTVDMESDHEIEIARQQESETVENIECVENNDEHVNQEQDQDNHVDEIDKPEEIENEEDQDTGDSQANMEIDESCTHANIDDIGKIDKEEHLEEHDEQEVNPEADEHDNDEDMPPPPVVELNEEVQHSSSEINEEDEELDGTADLNETVDHKPTELDPDKTYVTKSQKDFIEKYRDVIQQINTKRCICCDKTYPRRKAVVQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRANACTDLWKIVFDKNGIPDDMVIKYEPQAKIQSKDIFNARSYACRLCPAKFQLKQSIMKHVLDVHEDGQSNIPLGCVHCRTSFKDRSLLKKHIRVGECTVYINCDLCSEQFSNMQDFSDHALTVHAEHFVKSDNQNKCIDGRATDCSLCGKKNSNYLNLVKHLKFVHNEDRPHYCQNCDAKFEHAADLNKHIYAEHSDQALGLTPHEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYSCSICPNSYSTPQKLSDHVQQSHPIGGETEFFCDVCIRSFKSRQAFSNHMRIHAKVPTTNRKPGEQKGFDPRIIGKPVKQFTMVQPGFVNFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMQASTEDDDYNPDENGALSTPQFNSFNFSNFSNSTPQQQQQDSMPFSCELCSKRFPIRTSLWKHKRAKHGIVNPGASAGNETPAQPKSESSRSSCTICKINFADKKSYYRHRKNVHKTATEMCKLCGKPLNSTLELYEHLKAAHARELLGYNANQGSSKTQEVSQEQDVEYENETESADPSMDYQARYPCDTCGKQFVGLLALQNHQCINQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDVVQLARVSHSTPSSHSAPAAAVTAKRRLPPEVEVTVVNPNKKMRSDDSVELDQQNHEVADGKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDRSFTRKSTLLVHMKKHYEGGESSSTVQMEEEGHSCDVCGAIFESEKGLRVHRERHHAEDSEQSEDDGNAPAAPPGEFTCGQCGDGVASPRDLLAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00935961;
- 90% Identity
- iTF_00207177;
- 80% Identity
- -