Aleu012984.1
Basic Information
- Insect
- Agriopis leucophaearia
- Gene Symbol
- -
- Assembly
- GCA_949125355.1
- Location
- OX421273.1:14934466-14935479[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-11 7.3e-09 35.8 0.0 1 37 15 51 15 55 0.95 2 2 1.2 8.5e+02 0.4 0.0 22 30 142 150 128 151 0.77
Sequence Information
- Coding Sequence
- ATGCCACGAAATTATGTGAGATCTACCTTGCGGGCATCTTGGTCTGAAACTGACCTGGACGAGGCCATGAAAAAAGTTCGTCAGAAAGAAATGGGTGTTAATGAGGCAGCACGTACATACAATATTCCTTCAAGAACACTTAGAAGACATATTTTGGCTGGAACATTGAAGGTTGGGCTTGGAAGAAGGCCTGTTTTTAACCAAGCGGAGGAAAAAAAGTTGGTTGCGCACATCAAACAACTCGAAAAAGTTGGATTTGCACCAGATCGGAAGGATGTCAAAGAAATGGCGTATCAATTAGCCCACAAGCTTAACATCAAACATATTTTCTCTGATACGTCTAAAAAAGCTGGTGATGTTTGGTTTACTAGATTTTTAAACAGGAACCCAGAGCTGAGCCAACGAAAATCCGAAGGTTTATCTCTTGCAAGAGCATACGGAGTTAATCGCGCCGATGTCCAAGACTTTTTTAACTTGCTGGCTCAAATATACGCCGAAAATGATCTAAGCACACATCCCGAGAAGATATTCAACATGGATGAAACAGGTATCCAAGTGAACAACAAACCTGGTAAAGTAATTGCAACAAATGGGTCTAAGGACGTGTACACGCTGACAAGCAGTGAAAAAGGAGAAAATGTCACAGTTATAGCATGTTGCAACGCACAAGGGAATTTTCTTCCACCAGTTCTAATTTACAAAGGCACATATAGTAAACCTCAATTTTCGGAAGGTTTGCCGCCTGGTTCGCAAgtgtttatgaataaaaaatcatcCTACATAAACACTGATCTTTTTATGAAATGGTTTGAGGAGATTTTTTTGCCAGCAAAAGGTCCTGGAAAAGCATTATTGATCATGGATGGGCATAGTTCTCACAGCAACAATATCAGATTATTGGAAGTGGCTAAAGATAATGATGTGACTTTATTATGCTTAAAACCCCTGAACAAACACCAACAAAGGTTTTGGCTGAAATCTATCCTGTCCCAAAGTTACCTGCAATGGTTTTGA
- Protein Sequence
- MPRNYVRSTLRASWSETDLDEAMKKVRQKEMGVNEAARTYNIPSRTLRRHILAGTLKVGLGRRPVFNQAEEKKLVAHIKQLEKVGFAPDRKDVKEMAYQLAHKLNIKHIFSDTSKKAGDVWFTRFLNRNPELSQRKSEGLSLARAYGVNRADVQDFFNLLAQIYAENDLSTHPEKIFNMDETGIQVNNKPGKVIATNGSKDVYTLTSSEKGENVTVIACCNAQGNFLPPVLIYKGTYSKPQFSEGLPPGSQVFMNKKSSYINTDLFMKWFEEIFLPAKGPGKALLIMDGHSSHSNNIRLLEVAKDNDVTLLCLKPLNKHQQRFWLKSILSQSYLQWF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825532;
- 90% Identity
- -
- 80% Identity
- -