Amal019874.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrilus mali
Gene Symbol
nfxl1
Assembly
GCA_029378335.1
Location
CM055659.1:25052610-25056317[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.74 2.7e+04 -3.7 1.5 15 19 163 167 162 167 0.81
2 17 0.075 2.8e+03 -0.5 0.8 4 10 198 204 197 204 0.95
3 17 3.5e-08 0.0013 19.7 17.3 1 19 212 229 212 229 0.99
4 17 1.6e-09 6e-05 24.0 13.9 1 18 265 282 265 283 0.97
5 17 0.68 2.5e+04 -3.6 1.0 6 10 308 312 307 312 0.88
6 17 7.9e-06 0.29 12.2 11.4 1 19 318 337 318 337 0.94
7 17 1.2e-05 0.45 11.6 11.0 1 18 372 389 372 390 0.97
8 17 4.2e-05 1.6 9.9 16.8 2 18 425 441 424 442 0.91
9 17 2.8e-11 1.1e-06 29.6 13.3 1 18 451 468 451 469 0.97
10 17 0.21 7.7e+03 -1.9 1.1 5 10 497 502 497 502 0.94
11 17 1.6e-05 0.6 11.2 6.8 9 19 517 527 515 527 0.89
12 17 0.021 7.7e+02 1.3 5.4 4 12 539 547 537 547 0.89
13 17 1 3.7e+04 -6.9 4.5 14 18 575 579 575 579 0.86
14 17 1 3.7e+04 -4.4 1.4 6 10 606 610 605 610 0.58
15 17 2.3e-05 0.87 10.7 5.9 1 12 616 627 616 627 0.96
16 17 7.7e-06 0.29 12.2 20.9 3 19 657 673 656 673 0.92
17 17 4e-07 0.015 16.3 11.7 1 16 716 730 716 736 0.93

Sequence Information

Coding Sequence
atgaataattttggaagacaaaataaaaacccgtggaacaaaaataatcttaaCAAAGATTTCCACAAAAATAACCCTACTAAAAATGCTGTGAGAGGTCCTGAATCAAAGTTTCAAGAGGCACAAAAGAAACTTCAAGCAGCTGTTCAAAAATATGCCAAAGACGTGGAGTCTTCAGAAGACGAAGAATTTGaagatgaaaatataatagattcaATACTGAAAGATTATGTAAATGATAAGAATACAGATGTTTCAACTAAAACTAAAGGTTCCATAGTAAACAGATTTTCTGCAGGAAATACAGTCTGTTTAATATGTATATCAACAGTGAAAAAGGCTGATTCTATTTGGAGTTGCTTTGAATGCTAtgcattttttcatttaacatGCATTCAAAGATGGTCAAAAGATGTCATTTATCAGAAGAAGCAAGCATTATTAGATCAAATTCCATTAAAATCCGTAGTAGAAGTATTATGGAGCTGTCCTAAATGCCGAACTGATTATCAACCATCAGATATTCCAAGcaaatatatttgttattgtggCAAGAAAGAAAATCCAAAACCTGAACAATTTTTAGCACCCCATTCATGCGGTGAAACTTGTAAAAAGGATTTGAAACCTTATTGTGGTCACAAATGTGTTCTATTATGTCATCCAgGCCCTTGTCCCCCTTGTCCAAAGACAGTCCAAGTTACTTGCTATTGTGGGAAACAACCACCACGGTCCCAAAGATGTAGCAGCAAAGAATGGTCTTGTAATTTGGCTTGTAACAAGTTACTTATTTGTGGCAAACATAATTGTACGAGACAGTGTCATGCAGGTGACTGTCCACCCTGTTTAAAGAAAAGCATACAGAGGTGTCTTTGTGGCTCTAGCTTGCAATTAAGGGACTGTGCTACTCCAGCATGGCAGTGTGACAaggTTTGCAACAAACCCTTGTCCTGTGATAATCATAATTGTTCAAAAAAATGCCACATACCTGGGGACTGTGAAGAATGTACACTAACAAAACCCAGAACATGCCCTTGTGGCAAATCATCATTTCTATTGCCGTGTACTGAAGAAACGCCATGTTGTGGGGACACTTGCGGCAAATTGCTCGAGTGTGGTGTTCACGTTTGCAACCAAAGATGTCACAAAGACAAATGTGGAACCTGTTTGGAAACTGTAACCAAATCTTGTCGTTGTGGACATTACACGCGTGAAGTGCAATGCAGAAAACCGTTTCTATGTGAaactaaatgtaaaaaaattaaagattgcAGAAAACATCCTTGTAATCGAAAGtgCTGTGACGGAAATTGTCCTCCCTGTGAAAAACTATGCGGCAGATCGTTAAATTGCGGAAATCATAAATGCAGTTCTGTTTGCCATAAGGGCCCTTGTTATCCTTGCAATTTAATGGAAAAAGTTTCGTGTCCTTGTGGGTTTACGTCTGTCGAAGTTCCTTGTggaaaaaaagggaaaacaaGACTTCCTAAATGTAATCAACTTTGCAACATTCCGCCTGATTGTCATCACGAAGCCCGTGAGAAACATCGTTGTCATACCGGAAATTGTCCCCCTTGTCGTCAAATTTGTAACAAGAGTCGTCCCAATTGTCCCCACCCTTGCCCAGCCCCTTGTCACTCTGCTGTAGTAGTAAAAGTAGAAGGAGAGAGGGGGTCTATGCCTTGGGAACAAACAGGACCTTACTATGAAAAGAGGGAACTCCCATGTCCCGATTGTATCGTCCCTGTTCCTGTTACATGTTTAGgaaatCACGAAACGTTAAATTGGCCCTGTCACTTAGCAAAGCCCTCAAGTTGTCACAGACCATGTGACAGGAGATTGCTGTGTGGAAATCACACATGTTCGTTTCAATGTCATACAGTCGAAAATGCCCCCGACGAATTACAGtcTGGATCGAATTGTGAAGAGTGCGAAAAAGGTTGTGACAAACCCAGGCCAGAAGGTTGCACCCACCCATGCCCAAGGCCCTGCCATCCAGGACCTTGTCCCCCATGTAAACAGATGATTCGTATCAAATGCTATTGCGGGCTTACGCAGCCTTATGTTGCTTGCAAAGATTGGATTGTACcggaaaataaagaaagtttGCAAAGCTGTGGAAATCAATGTCCTAAAAATTATGATTGTGGTCATCGATGTAAAGCTAATTGTCACCCAGGACCTTGTCCGAATGCAGATCTTTGcaagaaaaaagtgaaaataccATGTAACTGCAAAAGGATCAAAAAGGAATTTTCTTGCGAAACCGTCCGGAATGGGGGTGCAAAAGTGGACTGTGACGAAACGTGTTTTCAAAAGATGGAAGAGGAGAAACGGTTCAGAGACTTCGAAAACGAACTAATAAGAAGACAACAAGAACTTAAAAATCTCAAAGAACTGGAAAAGTATGAGAAGAAGTTTCAAGGCAAGAAGAAATTTTCAAGAAGAACTCGGCTCAGTGAAACTGAAGAACAAAGTGTATTTGTTAAATATCAGGGTTTGGTAGTTGTTATGTCGACATTTATCGCTGTTTTCGCAGCTGTATTAATTTACTGGTCATTATCTTAA
Protein Sequence
MNNFGRQNKNPWNKNNLNKDFHKNNPTKNAVRGPESKFQEAQKKLQAAVQKYAKDVESSEDEEFEDENIIDSILKDYVNDKNTDVSTKTKGSIVNRFSAGNTVCLICISTVKKADSIWSCFECYAFFHLTCIQRWSKDVIYQKKQALLDQIPLKSVVEVLWSCPKCRTDYQPSDIPSKYICYCGKKENPKPEQFLAPHSCGETCKKDLKPYCGHKCVLLCHPGPCPPCPKTVQVTCYCGKQPPRSQRCSSKEWSCNLACNKLLICGKHNCTRQCHAGDCPPCLKKSIQRCLCGSSLQLRDCATPAWQCDKVCNKPLSCDNHNCSKKCHIPGDCEECTLTKPRTCPCGKSSFLLPCTEETPCCGDTCGKLLECGVHVCNQRCHKDKCGTCLETVTKSCRCGHYTREVQCRKPFLCETKCKKIKDCRKHPCNRKCCDGNCPPCEKLCGRSLNCGNHKCSSVCHKGPCYPCNLMEKVSCPCGFTSVEVPCGKKGKTRLPKCNQLCNIPPDCHHEAREKHRCHTGNCPPCRQICNKSRPNCPHPCPAPCHSAVVVKVEGERGSMPWEQTGPYYEKRELPCPDCIVPVPVTCLGNHETLNWPCHLAKPSSCHRPCDRRLLCGNHTCSFQCHTVENAPDELQSGSNCEECEKGCDKPRPEGCTHPCPRPCHPGPCPPCKQMIRIKCYCGLTQPYVACKDWIVPENKESLQSCGNQCPKNYDCGHRCKANCHPGPCPNADLCKKKVKIPCNCKRIKKEFSCETVRNGGAKVDCDETCFQKMEEEKRFRDFENELIRRQQELKNLKELEKYEKKFQGKKKFSRRTRLSETEEQSVFVKYQGLVVVMSTFIAVFAAVLIYWSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00031480;
90% Identity
iTF_00030687;
80% Identity
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