Abig013784.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrilus biguttatus
Gene Symbol
nfxl1
Assembly
GCA_963921985.1
Location
OY998123.1:29967499-29972539[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1.5 1.6e+04 -3.7 1.5 15 19 163 167 162 167 0.81
2 17 0.15 1.6e+03 -0.5 0.8 4 10 198 204 197 204 0.95
3 17 6.9e-08 0.00075 19.7 17.3 1 19 212 229 212 229 0.99
4 17 4.5e-08 0.00049 20.3 14.1 1 18 265 282 265 283 0.97
5 17 1.1 1.2e+04 -3.3 1.5 6 10 308 312 307 312 0.90
6 17 2.2e-07 0.0024 18.1 10.1 1 18 318 336 318 337 0.99
7 17 2.4e-05 0.26 11.6 11.0 1 18 372 389 372 390 0.97
8 17 8.5e-05 0.91 9.9 16.8 2 18 425 441 424 442 0.91
9 17 7.6e-11 8.2e-07 29.2 13.5 1 18 451 468 451 469 0.97
10 17 0.81 8.8e+03 -2.9 0.9 5 10 497 502 497 502 0.93
11 17 2.6e-05 0.28 11.5 7.1 9 19 517 527 515 527 0.89
12 17 0.041 4.5e+02 1.3 5.4 4 12 539 547 537 547 0.89
13 17 2 2.2e+04 -6.9 4.5 14 18 575 579 575 579 0.86
14 17 2 2.2e+04 -4.4 1.4 6 10 606 610 605 610 0.58
15 17 4.6e-05 0.5 10.7 5.9 1 12 616 627 616 627 0.96
16 17 0.0003 3.3 8.1 22.7 4 19 658 673 656 673 0.92
17 17 1.7e-06 0.018 15.3 13.0 1 16 716 730 716 736 0.92

Sequence Information

Coding Sequence
atggATCATTTTGgaagagaaaataaaaatccgtggaataaaaataatcttaataaacattttcacaaaaacaacCATACCAAAAATGCTGCGAAAAGTTCTGAATCAATGTTTGAAGAAGCCCAAAAAAAACTACAAGCAGCTGTTCAAAAATTTGCCAAAGACGTGGAATCTTCGGAGGACGAAGAATTTGGAGATGAAAATATAATAGATTCAATACTGAAAGATTATGTTAATGATAAGAATGTGGATATTTCAACTAAAACTAAAGGATCCATAGTAGATAGATTTTCTGCAGGAAATACAGTCTGTTTAATATGTATATCAACAGTTAAAAGGACTGATTCAATTTGGAGTTGCTATGAATGTTATGCATTTTTCCATTTAACATGCATTCAAAGATGGTCAAAAGATACTATTTATCATAAGAAACAAGCATTATTGGATCAAATACCTGTAAAATCTGCAATAGAAGTATTATGGAGCTGTCCTAAATGCAGAACCGATTATCAACCATCTGATATTCCTAGcaaatatatttgttattgcGGCAAGAGAGAAAATCCAAAGCCTGAACAATTTTTAGCACCCCATTCATGCGGTGAAACTTGTAAAAAAGATTTGAAACCTCTTTGTGGGCACAAATGTGTTCTGTTATGTCACCCAGGCCCTTGTCCCCCATGTCCAAAGACAGTACAAATTACTTGCTATTGTGGAAGACAACCACCAAGAGTTCAAAGATGCAGCAGGAAAGAATGGTCTTGTAATTTGGCTTGTAACAAGATACTTATTTGTGGCAAACATAATTGTCCAAAACAATGTCATGCAGGTGATTGTTCACCATGTCTAAAGAAAAGTATTCAGAAGTGTCTTTGTGGCTCTACACAGAAATTGAGGGACTGTGCTACTCCATCCTGGCAGTGCGAAAAGATTTGCAACAAACCTTTGACCTGTGGTAaccataattgttcaaaaaaatgtCACATACTGGGAGACTGCGGAGCATGTATATTAACAGAACCTAGAACGTGCCCTTGTGGAAAATCGTCGTTTATATTACCGTGTACTGAGGAAACGCCATGTTGTGGGGACACTTGTGGCAAATTGCTCACATGTGGCGTTCACGTTTGCAATCAAAGATGTCACAAAGACAAATGTGGAACTTGTTTGGAAACCGTTACTAAATCTTGTCGCTGTGGACATTATACGCGCGAAGTGCAATGCAGAAAACCGTTTCTGTGCGAaaccaaatgtaaaaaaattaaagattgCAGGAAACATCCTTGTAATCGAAAGTGTTGTGACGGAAATTGCCCACCCTGTGAAAAACTGTGTGGTAGGTCATTAAATTGTGGAAATCATAAATGCACTTCCGTTTGCCATAAGGGCCCTTGTTATCCGTGTAAtttaatggaaaaagtttcgtGTCCTTGTGGATTTACGTCCGTTGAAGTTCCTTGcggaaaaaaaggaaaaacaagaCTTCCCAAgtgtaataaaatttgcaaCATTCCGCCCGATTGTCATCACGAAAATCGCATAAAACATCGTTGTCATTCCGGAAATTGCCCTCCTTGTCGtcaaatttgtaataaaagtcgTCCTAATTGTCCCCATCCATGCCCAGCCCCTTGTCACTCTGCAGTTGTCGTAAAAGTAGAGGGCGAGAAGGGGTCTATGCCTTGGGAACAAACAGGACCATACTATGAAAAGAGAGAACTCCCATGTCCCGATTGTATCGTCCCTGTTCCAGTTACATGTTTGggaaatcACGAAACGTTAAATTGGCCCTGTCACTTAGCAAAGCCCTCAAGTTGTCACAGACCTTGTGACAAGCGATTACTTTGTGGAAATCACACCTGTTCCTTTCAATGTCACACAGTTGAAAATGCCCCTGATAAATTACAGTCTGGATCAAATTGTGAACAATGCGAAAAAGGTTGTGATAAACCTAGGCCTGAGGGTTGTTGCCACGCCTGCCCACTGCCCTGCCACCCAGGACCTTGTCCCCCATGCAAACAGATGATTCGTATCAAATGCTATTGTGGGCTTATGCAACTTTATGTCGCTTGCAAAGATTGGATCGTGCCCGAAAATCAGGGAAATTTACAAAGCTGTGGAAATCAGTGTCCTAAAAATTACGATTGTGGTCATCGATGTAAAGCGAATTGTCACCCAGGACCTTGCCCTAATCCAGATCTTTGCAAGAAAAAAGTTAAAGTGTCATGCAGCTGTAAACGGATTAAAAAAGACTTTTCTTGCGAAACCATCCGAAATGGGGGTGCAAAAGTGGACTGTGAcgcaatttgttttcaaaaaatggAAGAAGAAAAGCGCTTCAGAGACTTTGAAAACGAACTAATAAGGAAACAGCAAGAACTCAAAAATCTCCGAGAACTAGAGAAATATGAGAAGAAATTCCAAGGAAAGAAGAAATTTTCAAGAAGAACTCCCGTCAGTGAAACCGAAGAGCAAAgcgtatttattaaatatcagGGTTTGGTAGCTGTTTTGTCAACATTTATCGCAGTTTTCTCAGCTGTATTAATTTACTGGTCATTATCTTAA
Protein Sequence
MDHFGRENKNPWNKNNLNKHFHKNNHTKNAAKSSESMFEEAQKKLQAAVQKFAKDVESSEDEEFGDENIIDSILKDYVNDKNVDISTKTKGSIVDRFSAGNTVCLICISTVKRTDSIWSCYECYAFFHLTCIQRWSKDTIYHKKQALLDQIPVKSAIEVLWSCPKCRTDYQPSDIPSKYICYCGKRENPKPEQFLAPHSCGETCKKDLKPLCGHKCVLLCHPGPCPPCPKTVQITCYCGRQPPRVQRCSRKEWSCNLACNKILICGKHNCPKQCHAGDCSPCLKKSIQKCLCGSTQKLRDCATPSWQCEKICNKPLTCGNHNCSKKCHILGDCGACILTEPRTCPCGKSSFILPCTEETPCCGDTCGKLLTCGVHVCNQRCHKDKCGTCLETVTKSCRCGHYTREVQCRKPFLCETKCKKIKDCRKHPCNRKCCDGNCPPCEKLCGRSLNCGNHKCTSVCHKGPCYPCNLMEKVSCPCGFTSVEVPCGKKGKTRLPKCNKICNIPPDCHHENRIKHRCHSGNCPPCRQICNKSRPNCPHPCPAPCHSAVVVKVEGEKGSMPWEQTGPYYEKRELPCPDCIVPVPVTCLGNHETLNWPCHLAKPSSCHRPCDKRLLCGNHTCSFQCHTVENAPDKLQSGSNCEQCEKGCDKPRPEGCCHACPLPCHPGPCPPCKQMIRIKCYCGLMQLYVACKDWIVPENQGNLQSCGNQCPKNYDCGHRCKANCHPGPCPNPDLCKKKVKVSCSCKRIKKDFSCETIRNGGAKVDCDAICFQKMEEEKRFRDFENELIRKQQELKNLRELEKYEKKFQGKKKFSRRTPVSETEEQSVFIKYQGLVAVLSTFIAVFSAVLIYWSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00031480;
90% Identity
iTF_00032585;
80% Identity
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