Basic Information

Insect: Agrilus mali
Gene Symbol: ZIPIC
Assembly: GCA_029378335.1
Location: CM055663.1:5848737-5851907[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.8 7.6e+02 1.9 0.0 2 23 7 28 6 28 0.91

2 14 0.0052 0.51 11.9 1.1 2 23 673 695 672 695 0.89

3 14 0.3 29 6.4 2.1 2 23 706 727 706 727 0.97

4 14 2.4e-05 0.0024 19.3 1.9 2 23 730 751 729 751 0.97

5 14 0.13 13 7.5 3.8 1 23 757 779 757 779 0.92

6 14 0.00033 0.032 15.7 6.1 2 23 786 807 785 808 0.95

7 14 5.4 5.3e+02 2.4 0.7 6 23 823 840 821 840 0.94

8 14 3.8e-05 0.0037 18.7 1.3 3 23 847 868 846 868 0.97

9 14 0.0046 0.45 12.1 0.1 2 23 884 904 883 904 0.97

10 14 3.8e-05 0.0037 18.6 1.2 1 20 910 929 910 932 0.92

11 14 0.00039 0.038 15.5 0.2 1 23 940 962 940 962 0.99

12 14 0.0039 0.38 12.3 5.5 1 23 968 990 968 990 0.98

13 14 3.2e-07 3.1e-05 25.2 3.7 1 23 996 1018 996 1018 0.98

14 14 0.00064 0.063 14.8 6.6 1 23 1024 1046 1024 1047 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.8	7.6e+02	1.9	0.0	2	23	7	28	6	28	0.91
2	14	0.0052	0.51	11.9	1.1	2	23	673	695	672	695	0.89
3	14	0.3	29	6.4	2.1	2	23	706	727	706	727	0.97
4	14	2.4e-05	0.0024	19.3	1.9	2	23	730	751	729	751	0.97
5	14	0.13	13	7.5	3.8	1	23	757	779	757	779	0.92
6	14	0.00033	0.032	15.7	6.1	2	23	786	807	785	808	0.95
7	14	5.4	5.3e+02	2.4	0.7	6	23	823	840	821	840	0.94
8	14	3.8e-05	0.0037	18.7	1.3	3	23	847	868	846	868	0.97
9	14	0.0046	0.45	12.1	0.1	2	23	884	904	883	904	0.97
10	14	3.8e-05	0.0037	18.6	1.2	1	20	910	929	910	932	0.92
11	14	0.00039	0.038	15.5	0.2	1	23	940	962	940	962	0.99
12	14	0.0039	0.38	12.3	5.5	1	23	968	990	968	990	0.98
13	14	3.2e-07	3.1e-05	25.2	3.7	1	23	996	1018	996	1018	0.98
14	14	0.00064	0.063	14.8	6.6	1	23	1024	1046	1024	1047	0.95

Sequence Information

Coding Sequence: ATGAGCAGTGAAAGCATTGTATGTCCTGTGTGTACCTTGTTCCTGAGGCCAGGAATGACTTTGACTTCACATTTGGGAAGTCACCCAAAACAAAAAGTCATTGAAGCTTTGGTTCGATTATCATCAAATCAAAATACAGGAAGTAAGGAATTAGCCATTACAAATACTAGTGAGAATGTACCAAGCACAAGCATAGTCACTAGTCAAGAGAGCAATGGTACACAAACACTTATGAATGAACTTATTGAGCCAAAATCTGATCCAGCACAAAATTTTGGTGTTGTATCTGGTAATCATTCCTTTATTTATCAACAGTTTATGAGTACGTCTAGTCAGCAATCAACGCAAGCTGTTTTAAATGGCAACCCATTAACTCCCCAGTATATTACTATTCCAACGGTATTTAGTCCTCAAATGCCTCAAATGGCACAGTTGCCTCAAATGGTATGTTCTCCTTATGTGTATCAACAACAGCAAGTAATAATGTCATCAGGGCCTTCTATGCCTCCATTACTTCCTAAGCCTGTGCCTGTTTCACAACACATGCATATTCCTCCAATGCATCCACCTGTGGCACCACTACCAATTGAGGCTCCTGCTGCTAACTCGTTTGATGAAAGAAATGGTTTTATTTTGCTTGATAATGATAAACCAAGTTGTAATGAATCTGTTGCAAGACCTTGTTCACGTTCTAGTATAAATAGTATTGTTATGTCTCCAGTAACTAGTTGTCATGAAGATTACAGAAGCCAGGCTTCAATGTCTCCTGTTTTTTCTCCAGACCCCCAGATTGAAACTACTAAAGATGAATGTAATgtggaaaataattataaaaaagaagatCCTGTTAAAGACGATGAGGAGCCCTATCTGAACAATGAAAAAGTTGATACCGACAATGGTGACTGCAgtcaaacaaatttaaaagaattcgAGGAGGAACAAAAAGATGAAAAAGATGAGGAATCAAATGTTCCTTTGGAAGAAGTTGATTTCTTTGGAGGTGAAACTGAACAACCTGATATGACCATCACTCAGAAAAGTGATTGTCCACCATCTAATTATTACAACAGGGAGGGGTCACTCAATTCATCTAATTGTATAGGAGTTAATACTACATTCAATATTGAAGATCCTGTATTTACCATATCAAATGCTTTTGGAGAAAATGAAACAGGAAATGTAAGTAGCTTAGAAAACATCAACCTAATTTTACCTCCTAACTTTACGGGCGCTCAGTTTATATCTCGTGTAgaagattttgaaaatattcatcAGGATGACAAAAGAATTATAATGAACATTGGATGCATGGATAATAATAGTTCGAGTAGAATTATTGAGCATTTAGGTGAAGAAAGTATGTCACAGGCAAGTGAAAATGTCAGCATAAGAGCTGATGAACATATGCCTGCCCGTGGGGAGCTATCAGGCCCTGAAAGTAATGGAGCAGCCAGTGATACTGTTTGGGGTCGTCTGAATTATGAAGGAAACTCAAGAATATCAGCATCTTATGATATTCTACAAGAATCTTGGGATGCTTCTGATGGATCATTCAATGATGTACCCCCCTTGCAAAGTAGAAATATTGCAGGTATAGGTTCTAGACCTGATGAGAATGATGACTCACCAACTGTTATTAGTGTCATTGCAGCAcctaaaaactttaaatgttcCATATGTGGAGATGCTTTCAATTGTCTTAAAGAACGCCGCACGCATCACAGATTGAAACATAAAGACGAGAATGAGAAAAACGACGATAAGTCGTCAAAAGAATCGGGTGGGACCACCAACATAATTAATGTAGTAGGAGCCAAAATAGgctcaaagaaaataaagaagctggttattaaatcaaaaccgacgacagaaaataatttcgataatgtttttaccaataaaattagaaaccaACAGCAGGAGGACAATGAAGAGAAACAAGAGCAATCAAATGTATTACAGTCTCCACCAATAAAAGAAGAGgatataaaactaattaaaacagAACTTGTCAGCTGTCACCTTTGTGATCGGACTTTTCCAAcaattaaactattaaaaagcCACAGTTCCCTGGAGCATAACTTAAATGTGAATGTCGAATCGAAACGACAGTGTGCTGTATGCGAAGAACACTTTCAGACTGAGTTAGAATTTCATAAGCACCTCATGATCCACCCTTTAGAATGTCGAATATGCGGCAAGTACTTTTatcgaaaacaaaatatgCAACTCCACATGAAACGGCATCTCGGAATACGTCCATACAAGTGCGACTTGTGCGGCAAATCATTCTTgactaaacaaaaatgtaatgaaCATAGAAATATTCACACAGGAGAAACGCCAGTAAGATGCAGGTTGTGCAACGAGACTTTCAAAAGGCATTCGAATCTCATCCAGCATCGTAACAAGCACCACTTCAATATACCAACCAGAGTGAAAAGagattacatttgtttttgtgGCGAAGTTGTCCActcgaaaaaaaaactagCGTGGCACAAGGAAATTCACGAAATAAAACCGAAAGCGTGCTTGTATTGTTCAGAAAAATTTGTACATTCAGCTAGTTTAACACGACACATGCGTCGTGCGCACAACCAACACTTTGTACCTGAAAAGGACCGCAGTTCTGAAAACGTAGAATGTCCCATTTGTAAAAAGATCTACCTCCGTTCATCTCTTGACGCCCATATTCGTAGTCACAGTGGTGAAAAGTCGTTTACGTGTCCTGTTTGTAATAAAGACTTCACCACCAAATGGAATCTAAAGCTACACAAATGGACGCATGCGGCTCGATCGTCGAAACCATTCAAGTGCGATCAGTGTAGAGGGGCCTTCATTCGGGAGTCGGAATACATCGCCCATATGAATTCACACAAGAGCGTCCGGCCATATACGTGCAATCATTGCGGTGCACAGTTTATAAGGAAATATAATTGTCAGCGTCATGTGAAAGAACATTTATCAGGGAAATCGTTTTCGTGTAACATTTGCGGCAAAACGTTTCATAGATCGTACTATTTGAAAGATCATATGCGGGTGCATAATGGCACCAGACCATTTGCTTGTCACGTATGTGGAAAAACATCTACCACTAAATCGAATCACAACAAACATATTCGTATACATCATGCGAGGGAACCTGTTAGCACCGAGAATTAA
Protein Sequence: MSSESIVCPVCTLFLRPGMTLTSHLGSHPKQKVIEALVRLSSNQNTGSKELAITNTSENVPSTSIVTSQESNGTQTLMNELIEPKSDPAQNFGVVSGNHSFIYQQFMSTSSQQSTQAVLNGNPLTPQYITIPTVFSPQMPQMAQLPQMVCSPYVYQQQQVIMSSGPSMPPLLPKPVPVSQHMHIPPMHPPVAPLPIEAPAANSFDERNGFILLDNDKPSCNESVARPCSRSSINSIVMSPVTSCHEDYRSQASMSPVFSPDPQIETTKDECNVENNYKKEDPVKDDEEPYLNNEKVDTDNGDCSQTNLKEFEEEQKDEKDEESNVPLEEVDFFGGETEQPDMTITQKSDCPPSNYYNREGSLNSSNCIGVNTTFNIEDPVFTISNAFGENETGNVSSLENINLILPPNFTGAQFISRVEDFENIHQDDKRIIMNIGCMDNNSSSRIIEHLGEESMSQASENVSIRADEHMPARGELSGPESNGAASDTVWGRLNYEGNSRISASYDILQESWDASDGSFNDVPPLQSRNIAGIGSRPDENDDSPTVISVIAAPKNFKCSICGDAFNCLKERRTHHRLKHKDENEKNDDKSSKESGGTTNIINVVGAKIGSKKIKKLVIKSKPTTENNFDNVFTNKIRNQQQEDNEEKQEQSNVLQSPPIKEEDIKLIKTELVSCHLCDRTFPTIKLLKSHSSLEHNLNVNVESKRQCAVCEEHFQTELEFHKHLMIHPLECRICGKYFYRKQNMQLHMKRHLGIRPYKCDLCGKSFLTKQKCNEHRNIHTGETPVRCRLCNETFKRHSNLIQHRNKHHFNIPTRVKRDYICFCGEVVHSKKKLAWHKEIHEIKPKACLYCSEKFVHSASLTRHMRRAHNQHFVPEKDRSSENVECPICKKIYLRSSLDAHIRSHSGEKSFTCPVCNKDFTTKWNLKLHKWTHAARSSKPFKCDQCRGAFIRESEYIAHMNSHKSVRPYTCNHCGAQFIRKYNCQRHVKEHLSGKSFSCNICGKTFHRSYYLKDHMRVHNGTRPFACHVCGKTSTTKSNHNKHIRIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00031303; iTF_00030456;
90% Identity: -
80% Identity: -