Basic Information

Insect: Agrilus cyanescens
Gene Symbol: -
Assembly: GCA_947389935.1
Location: OX376704.1:28284571-28287801[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.3 1.1e+03 1.9 0.0 2 23 7 28 6 28 0.91

2 14 0.005 1.2 11.1 1.4 2 23 693 715 692 715 0.89

3 14 0.0022 0.54 12.2 0.2 2 23 726 747 726 747 0.97

4 14 7.2e-06 0.0018 20.1 4.1 2 23 750 771 749 771 0.97

5 14 0.039 9.7 8.3 3.4 1 23 777 799 777 799 0.85

6 14 0.00025 0.062 15.2 6.3 2 23 806 827 805 828 0.95

7 14 3 7.3e+02 2.4 0.7 6 23 843 860 841 860 0.94

8 14 2.1e-05 0.0051 18.6 1.3 3 23 867 888 866 888 0.97

9 14 0.0082 2 10.4 0.1 2 23 904 924 903 924 0.97

10 14 2.1e-05 0.0051 18.6 1.2 1 20 930 949 930 952 0.92

11 14 0.00016 0.039 15.8 0.2 1 23 960 982 960 982 0.99

12 14 0.0021 0.53 12.3 5.5 1 23 988 1010 988 1010 0.98

13 14 1.8e-07 4.3e-05 25.1 3.7 1 23 1016 1038 1016 1038 0.98

14 14 9.1e-05 0.023 16.6 7.5 1 23 1044 1066 1044 1067 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.3	1.1e+03	1.9	0.0	2	23	7	28	6	28	0.91
2	14	0.005	1.2	11.1	1.4	2	23	693	715	692	715	0.89
3	14	0.0022	0.54	12.2	0.2	2	23	726	747	726	747	0.97
4	14	7.2e-06	0.0018	20.1	4.1	2	23	750	771	749	771	0.97
5	14	0.039	9.7	8.3	3.4	1	23	777	799	777	799	0.85
6	14	0.00025	0.062	15.2	6.3	2	23	806	827	805	828	0.95
7	14	3	7.3e+02	2.4	0.7	6	23	843	860	841	860	0.94
8	14	2.1e-05	0.0051	18.6	1.3	3	23	867	888	866	888	0.97
9	14	0.0082	2	10.4	0.1	2	23	904	924	903	924	0.97
10	14	2.1e-05	0.0051	18.6	1.2	1	20	930	949	930	952	0.92
11	14	0.00016	0.039	15.8	0.2	1	23	960	982	960	982	0.99
12	14	0.0021	0.53	12.3	5.5	1	23	988	1010	988	1010	0.98
13	14	1.8e-07	4.3e-05	25.1	3.7	1	23	1016	1038	1016	1038	0.98
14	14	9.1e-05	0.023	16.6	7.5	1	23	1044	1066	1044	1067	0.96

Sequence Information

Coding Sequence: ATGAGCAGTGAAAGCATTGTATGTCCCGTGTGTACATTGTTCCTGAGGCCAGGAATGACTTTGACCTCTCATTTGGGCAGTCACCCAAAACAAAAAGTCATTGAGGCCTTGGTTCGACTGTCTTTGAATCAAAGTACAAGAACTAAAGATTTGGCTATTACTAATACCAATGAAAATGTACCGAGTACAAGCATAGTGACCAATCATGAGAGCAGTGGTACACAAACATTCATTGATGAATCTGTTCAGCAGAAACCAGATGCAGCACAAAATTTTGGTGTTGTATCTGGTAACCACTCCTTTATTTATCAACAGTTTATGAGTACGTCTAGTCAGCAATCAACGCAAGCTGTTTTAAATGGCAACCCAATGGCCACCCAATATATCACTATTCCAACAATATTTAATCCTCAAATGCCTCAGGTGGCCCAAATGCCACAAATGGCACAGTTGCCCCAAATGGCTCAGATGCCTCAAATGGTGTGCTCTCCTTATGTATATCAACAACAGCAAGTTATAATGTCATCAGGATCATCTATGCCTCCATTAATTCCTAAGCCTGTGCCTATTTCACAAATGCATATTCCTCCGATGCATCCACCTGTGCCACCACCACCGCCCATTCAAACTCCCGCTATTAACTCCTACGAGGAAAGAAATGGTTACATTTTACTCGATAATGACAAAAGAAGCTCTAATGAAAGTGCAACAAGATCTTGTTCAAGATCCAGTGTTAATAGTACTGCTATGTCTCCAGTAACCAGCTGTCATGAAGATTATAGAAGCCAGGCTTCAACGTCTCCTGTTTTTTCTCCAGACCCTCAGGTCGAGACTACAAAAGATGAATGTACTGTGGAAGATGACTGTCCTGCGAAGGATGACTGTAAAAAGGAAGACCCTATTAAAGACGATGAGGAGCCTTATATTATTAAGGATACAATTGGTAACAACAGTGGCGACTGCAGCAAAAAGAGTTTAGAAACGTATGAAGAAGAAGAGAAAAAAGATGAAATAGATGGAGAAGCAAATGTTCCTTTGGAAGCAGTAGATTTCTTTGGGGGTGAGGCTGCACCACCTAATACTGCTGTTGCTCAGAAAAGTGATTGTGAACTGCCTGATTACTACAGTGGAGAAGGGGCTCTTGATACAGCTGATTGTGTGAAGATTAATAATTCATACGATCTTGAAGATCCTGTGTTTGCAATGTCTAATACATTTGGAGAGAATGAACCAGCAAATGTAAGTACTTTGGACAACATTAATCTTATTTTACCTCCCGACTTTACGGGTGCTCATTTCATTTCCCGTGTAGAGGATTTTGAAAATATTCACCAAGATGATAAGAGAATTATAATGAACATTGGATGTTTAGATAATAACAGTTCGGGCAGAATTATTGAGCATTTAGGCGAAGAAAGTATGTCTCAGGCTAGTGAAAATGTCAGCATAAGAGCGGATGAACACATGCCTGCTAGAGGTGAGCTTTCAGGCCCTGAGAGTAATGGAGCAGCCAGTGATACAGTCTGGGGTCGTCTTAACTATGAAGGAAACTCGAGAATATCGGCATCGTACGATATTTTACAAGAATCATGGGACGCATCTGACGGATCTTTTACAGATGTACCCCCTTTGCAAAGTAGAAACATTGCGAGTATGGATTGTGAACTTGATGAAAATGACGACTCACCAACAGTTATTAGTGTAATTGAACCACCAAAGAACTTTAAATGTTCCATATGTGGAGATGCTTTCGATTGTCTTAAAGAACGTCGCTTGCATCACAGGTTAAAACATAAAGGAGAGAACGAGAAGAACGACGATAAGTCATCTAAACAAACGACAGCAACCACCAACAATGTAAACGTGATAGGAGCTAAAATCGGCGCAAAGAAGGTAAAGAAACTTGTTATTAAACCAAAGCCTACAACAGCAGAAAATAATTTCGATAATGTTTTTACCAATAAAATCAGAAGCCAACAACAGCAGGACAACGAGGAAAACTTGCAGGAGTCAGATGTGTTGCAGTCCTCTACAATCAAAGAAGAAGATGAGAAACTTATTAAGCCGGAAATTGTCAGTTGTCATCTCTGCAATCGCACTTTTCCAACGATAAAACTATTAAAAAGTCACAGTTCTTTAGAACATAATGTAAATGTAAACGTCGAATCAAAACGACAGTGTGCTGTATGCGAAGAACGTTTTCAGACCGAATCAGAATATAGTAAACACCTTATGATCCATCCTTTAGAATGTCGGATATGTGGAAAGTGCTTTTACCGAAAACAAAATATGCAACTTCACATGAAACGGCACTTAGGAATACGTCCTTACAAGTGCGACATATGCGGCAAATCGTTTTTAACGAAGCAAAAATGTAGCGAACATAGAAATATTCACACAGGAGAAACACCAGTAAAATGCAGGTTATGCAACGAGACATTCAAAAGGCATTCGAATCTCGTTCAACATCGCAACAAGCACCATTTTAATGTACATACCAAAGTGAAGAAGGACTACATTTGTTTTTGTGGCGAGGTTGTCCATTCGAAAAAGAAACTAGCGTGGCACAAGGAAATCCATGAGATAAAACCAAAAGCGTGCTTATATTGCTCAGAAAAGTTTGTACATTCTGCCAGTTTAACACGACATATGCGCCGTGCGCACAATCAACACTTTGTACCTGAAAAGGATCGAAGTTCTGATAACGTAGAATGTCCCATTTGCAAAAAGATCTACCTCCGTTCATCTCTTGATGCTCATGTTCGTAGCCACAGTGGTAAAAAGTCATTTACTTGTCCTGTTTGCAACAAAGACTTCACCACGAAGTGGAATCTAAAACTGCACAAATGGACGCACGCGGCTCGATCATCGAAACCATTTAAGTGCGAGCAATGCAAGGGGGCCTTTATTAGAGAGTCAGAATACGTGGCACACATGAACTCTCACAAGAGTGTCCGGCCGTACACCTGCAACCATTGTGGTGCACAGTTTATAAGGAAATATAATTGTCAGCGTCACGTGAAAGAACACTTATCGGGGAAATCATTTTCTTGTAACATATGCGGCAAAACTTTCCATAGATCGTACTACTTGAAAGATCATATGCGGGTGCATAATGGCACGAGGCCGTATACTTGTCACATTTGTGGAAAAACGTCAACCACTAAATCGAACCACAACAAACATATTCGTATACATCATGCAAGGGAACCGGTTAGCACCGAAAACTAG
Protein Sequence: MSSESIVCPVCTLFLRPGMTLTSHLGSHPKQKVIEALVRLSLNQSTRTKDLAITNTNENVPSTSIVTNHESSGTQTFIDESVQQKPDAAQNFGVVSGNHSFIYQQFMSTSSQQSTQAVLNGNPMATQYITIPTIFNPQMPQVAQMPQMAQLPQMAQMPQMVCSPYVYQQQQVIMSSGSSMPPLIPKPVPISQMHIPPMHPPVPPPPPIQTPAINSYEERNGYILLDNDKRSSNESATRSCSRSSVNSTAMSPVTSCHEDYRSQASTSPVFSPDPQVETTKDECTVEDDCPAKDDCKKEDPIKDDEEPYIIKDTIGNNSGDCSKKSLETYEEEEKKDEIDGEANVPLEAVDFFGGEAAPPNTAVAQKSDCELPDYYSGEGALDTADCVKINNSYDLEDPVFAMSNTFGENEPANVSTLDNINLILPPDFTGAHFISRVEDFENIHQDDKRIIMNIGCLDNNSSGRIIEHLGEESMSQASENVSIRADEHMPARGELSGPESNGAASDTVWGRLNYEGNSRISASYDILQESWDASDGSFTDVPPLQSRNIASMDCELDENDDSPTVISVIEPPKNFKCSICGDAFDCLKERRLHHRLKHKGENEKNDDKSSKQTTATTNNVNVIGAKIGAKKVKKLVIKPKPTTAENNFDNVFTNKIRSQQQQDNEENLQESDVLQSSTIKEEDEKLIKPEIVSCHLCNRTFPTIKLLKSHSSLEHNVNVNVESKRQCAVCEERFQTESEYSKHLMIHPLECRICGKCFYRKQNMQLHMKRHLGIRPYKCDICGKSFLTKQKCSEHRNIHTGETPVKCRLCNETFKRHSNLVQHRNKHHFNVHTKVKKDYICFCGEVVHSKKKLAWHKEIHEIKPKACLYCSEKFVHSASLTRHMRRAHNQHFVPEKDRSSDNVECPICKKIYLRSSLDAHVRSHSGKKSFTCPVCNKDFTTKWNLKLHKWTHAARSSKPFKCEQCKGAFIRESEYVAHMNSHKSVRPYTCNHCGAQFIRKYNCQRHVKEHLSGKSFSCNICGKTFHRSYYLKDHMRVHNGTRPYTCHICGKTSTTKSNHNKHIRIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00032303;
90% Identity: -
80% Identity: -