Amal028843.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agrilus mali
Gene Symbol
Hr39
Assembly
GCA_029378335.1
Location
CM055663.1:45187-48323[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.39 7.2e+03 -2.9 0.6 115 160 8 53 2 97 0.68
2 4 2 3.7e+04 -5.3 11.7 44 159 155 282 140 327 0.41
3 4 2.9e-08 0.00054 20.5 0.0 1 23 425 447 425 554 0.92
4 4 3.5e-74 6.5e-70 237.6 0.0 205 408 567 765 552 765 0.97

Sequence Information

Coding Sequence
ATGGCAGCCGAAATGAGGTCGCCGAACGTTTCCGTTACCCCCATTAAAGTGGAGCAGTATTCTCCACCCACCACCCCGACGACGACTTTCGTCAACGGAACGCCGCCCCCGCTTGCAACTCATCAACAGCGGTTGTCCACCCATTTGTCCTTCAATGAATCTCCACAACATGGtagTCGCCCTTCGTCCATCGCCAATTCCCTTGCCGTTCTTCCCAGTGGGGACATACTGGACAGCAGTTCGGACGCGGAGGTTGCCCAAATCGACTTCCTCCAGTCGACTTTAGTGAACATGagacagaaaaagaaaaaacgcgAGGACGTTCCGAGACCTATGTCGTGGGAAGGGGAGCTCTCTGATAAGGAGATGTGTATAGATGGGGACAGCGGATCTCAGttgCCCGAAAACCTGTCGATTTCTAGGCCGAAAGGGGAGGACGCGTGTACGTCGATTCGTTTAAAGTCACAAAAGCAACTACAGACGCAGGCACCGACACAGACACAGGCGATGACAGTAACTGCAACAGCGCCACCGAATTACTCTCTACACAGCACCCCAAACAATTCACCATTACTTGGACAACGACATCCAGGCACCGTACCTCTGCTCACTTCTCATCATAAAGAGTTGATGCAAAAGGCCCTTAACGTGCCCCCGACGCCCAGCCCCGATTCGGCCGTCCATTCCGCCTACAGTGTGTTCAGTTCTCCTAGCCAGTCTCCACTCACGCAACGTCATCTCACCCCCAACCTAAGTCGAAACAATAGCGACGCCTCACACTCGAGTTGTTGCAGTTATTCTAGCGTTTCAGTTTCCGTTTCGCCCACGCAACAATTTTCGCCTACCCATAGCCCCATACAGGGGCGTCACGTGCCCAATGCCGTCCATAATAGTCCCTTGCACCACAACGTATTGTATCGCTCTATCCAGGACGACAGCAGTGTGCAGTACTCGACGCCTCCTGATCACGAAGTGTTAGAGGATAGTGACGACAAGACCGGATTGATACACGCATCTCTACCTGCTCAATCGGGCATTTCAAGGCAGCAGCTCATCAATAGtcCTTGTCCTATTTGTGGAGACAAGATTTCTGGCTTTCACTATGGCATCTTCAGCTGTGAGTCGTGCAAAGGATTTTTTAAACGAACCGTTCAGAATCGAAAGAACTACGTTTGCCTGAGGGGCGCTTCCTGTCCCGTTACCGTAACTACAAGGAAAAAGTGTCCAGCATGTCGCTTCGACAAATGTCTGCAGTGTGGAATGAAACTGGAAGcAATAAGAGAAGATAGAACTCGAGGTGGTCGTTCGACGTACCAATGCTCGTATTCTTTGCCGCCGTCACTTGTTGGTCATACGGAATTGCGGACTAACAGCACGACAGATCTGCGACAGGGTTATAGCGATCTATCGCCCCAGGTTTTTCGGGTTAAGCTCGAACCGTGTGAACAGGGCTCCGGATCGCAATATTTAAAGAGGTCGACACCTCCCATATCCGCACGCCTCGGTGTCCCTCCGTTATTGCAGGAAATAATGGATGTGGAGCATCTTTGGCATTACAGTGACGTAGAGCTGAATAAGATAAACGAATGTACGATTGGAGGAGATGCTAGTGGAACAGCCACGGCATCCGGTGCTCCCGTGCCCAATATTTCGTCCCATCCTTTGTTGGCGGGCACGGCGCTCGCGGGTTCTGCTGACACGAACCCAGACTTTGTAGCGAATTTATGTAGCATAGCCGACCATCGATTGTACAAGATCGTCAAGTGGTGCAAGAGTTTACCCCTATTTAAAAACATCTCGATCGACGATCAAATTTGCCTTCTGATCAACTCGTGGTGTGAGTTGTTGCTTTTTTCGTGTTGTTTTCGATCGATTTCGACGCCGGGTGAAATTCGGATTTCAGTTGGGAAAAATATAACTCTGGAGAAAGCAAAAGAGATGGGCCTAGGGGCTTGTATTGAGCGCATGCTCAATTTTACAGATCATTTAAGAAGACTGCGCGTCGATAAATACGAATATGTTGCAATGAAAGTTATCGTACTACTTACATCAGaCACGTCGGAATTGCGTGAAGCCGAAAAGGTGCGTGCGAGCCAAGAAAAAGCACTTCAGGCGTTACAGCATTATACGTTGGCCCACTATCCTGACACGCCTGCCAAATTTGGAGAGCTCCTTTTGCGGATTCCCGAACTTCAGAGGACTTGtcaggtTGGTAAGGAGATGCTAACGATAAAGTCGAAGGACGGTGAGGGTCCAAATTTCAACCTTTTACTCGAGCTGTTGCGTGGAGATCATTAA
Protein Sequence
MAAEMRSPNVSVTPIKVEQYSPPTTPTTTFVNGTPPPLATHQQRLSTHLSFNESPQHGSRPSSIANSLAVLPSGDILDSSSDAEVAQIDFLQSTLVNMRQKKKKREDVPRPMSWEGELSDKEMCIDGDSGSQLPENLSISRPKGEDACTSIRLKSQKQLQTQAPTQTQAMTVTATAPPNYSLHSTPNNSPLLGQRHPGTVPLLTSHHKELMQKALNVPPTPSPDSAVHSAYSVFSSPSQSPLTQRHLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHVPNAVHNSPLHHNVLYRSIQDDSSVQYSTPPDHEVLEDSDDKTGLIHASLPAQSGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTVTTRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLVGHTELRTNSTTDLRQGYSDLSPQVFRVKLEPCEQGSGSQYLKRSTPPISARLGVPPLLQEIMDVEHLWHYSDVELNKINECTIGGDASGTATASGAPVPNISSHPLLAGTALAGSADTNPDFVANLCSIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSISTPGEIRISVGKNITLEKAKEMGLGACIERMLNFTDHLRRLRVDKYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQHYTLAHYPDTPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPNFNLLLELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00032118;
90% Identity
iTF_00030293;
80% Identity
iTF_00032118;