Amal006381.2
Basic Information
- Insect
- Agrilus mali
- Gene Symbol
- retn
- Assembly
- GCA_029378335.1
- Location
- CM055655.1:28512435-28521674[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-19 1e-15 58.9 0.1 18 89 40 109 31 109 0.93
Sequence Information
- Coding Sequence
- ATGTCCAATTTTGGTTTTTCGAATCTCGATGGTGGGAAGACAGGACTCGAACTCCCTTTCGTGGTTCTGCCACTGTGTTATGTGCCTTCTAAGCAAAATCAGAAGTCAATagtgtGGACTCCAATAAATCGGTTACCAATAATGGCCAAATCAGTATTGGATTTGTACGAATTGTACAATTTGGTTATAGCCAGAGGGGGACTGGTAGAtgtgataaacaaaaaattgtggcAGGAAATAATCAAAGGGCTGCACTTACCATCCTCTATAACGTCAGCTGCTTTTACTTTAAGGACACAGTATATGAAGTACCTGTATCCGTACGAATGTGAAAAAAGGCGATTGAGCACCCCCGCCGAATTGCAAGCAGCGATAGATGGCAACCGAAGGGAAGGTAGACGAAGTAGTTACGGTCAGTACGACAACGTCCAGAGGTCACCTATTCCTTCTACCCAGATGTCACCCCTCACCCTAGTATCTCAACAACAACAGTTTGCGGCCCGCATGAACTCTGTAATGAGTGGGGGTGTTAGTTTACACAACGGAGCCCACCATCCGAGCCACCCTCAACCCATGAGTCAACCCTTAAACGGCGGGCCCATCCCTGGTCTTGCTCCAAGCGAGTTCGAAGCTAGGATGATGGAATACGTGAAACTGTTAAACAAAGAAATGCGGAATTCTGCATCTACGCCCCCGAGACAAGGGGACATGTCACCACCAAGTGCAACGTCACCTCTCAACCCCTTGGAAATGTCACGCATGACGTTGTGGaacttatataataataaccaTCAGGTCGTTCATGAACCTCAGAAGGAAGCCTTGAATCTCTCAGAACCGAACCAGATGCAATCACCGCCCCATCCGCCCCTCGTCAAAAGGGAGTCCGAACGGGAATCTCCACCACCCGcgaaaaaattcataaaagaCGATGTCGAAAGTAAATCTCTATCACCAGCGAcacatattaaaattaatagtcGAGgTGATGGTCGAGGTGGTGATAGTTCATTAGTTGTTAGTATGGAGTTAAATGGTATAACATACCAGGGGGTGCTTTTTGCGCAATCGTCACCGCCCACGAGCAGAACTGCCCTCGCCtcttaa
- Protein Sequence
- MSNFGFSNLDGGKTGLELPFVVLPLCYVPSKQNQKSIVWTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGQYDNVQRSPIPSTQMSPLTLVSQQQQFAARMNSVMSGGVSLHNGAHHPSHPQPMSQPLNGGPIPGLAPSEFEARMMEYVKLLNKEMRNSASTPPRQGDMSPPSATSPLNPLEMSRMTLWNLYNNNHQVVHEPQKEALNLSEPNQMQSPPHPPLVKRESERESPPPAKKFIKDDVESKSLSPATHIKINSRGDGRGGDSSLVVSMELNGITYQGVLFAQSSPPTSRTALAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01480641;
- 90% Identity
- -
- 80% Identity
- -