Acya020804.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- stc
- Assembly
- GCA_947389935.1
- Location
- OX376705.1:4663212-4667297[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.8 4.6e+04 -4.0 1.6 15 19 267 271 266 271 0.81 2 13 0.021 5.4e+02 2.2 0.3 4 10 300 306 299 308 0.96 3 13 9.5e-07 0.024 16.1 13.6 1 18 313 329 313 330 0.93 4 13 7e-10 1.8e-05 26.1 13.1 1 19 366 384 366 384 0.98 5 13 1.1e-08 0.00027 22.3 14.3 1 19 424 442 424 442 0.96 6 13 5.8e-05 1.5 10.4 14.4 4 19 489 504 482 504 0.86 7 13 0.73 1.8e+04 -2.7 1.8 5 10 533 538 533 538 0.93 8 13 0.089 2.3e+03 0.2 12.9 1 11 544 554 544 566 0.88 9 13 2.7e-09 6.9e-05 24.2 10.6 1 18 571 588 571 589 0.97 10 13 0.0024 60 5.2 14.5 1 19 628 645 628 645 0.89 11 13 2 5.1e+04 -5.1 2.6 9 13 663 667 663 675 0.54 12 13 1.7e-07 0.0043 18.5 15.9 1 19 681 700 681 700 0.97 13 13 0.0019 48 5.6 16.9 1 19 710 729 710 729 0.93
Sequence Information
- Coding Sequence
- ATGAGTGAATCTGGTGCTTACAATTCATCAATTAACACTCATACTGCTGGAAATAGTACCAGATATAATGATAATGGCTCTGATCATTACAAAACAGATACAGCTTGTAATGTTTATAATCGAAACATTCCAATTTCATCAAGTACTTTAACTCCTGATGCTAAGGAATTTAAACCTAGCAGTAGTCTTGATTATAACAATGAAATTACTGAACCAAGTATCTCAAATGGTGCTATTAGAAAAAATTATAAAAAAAATATTGATAATGGTACAAGATATTATTCAAGATATAGCAATAGCAATGATCGTTATAGAAATGTAAATAATTACAATAAAAGTTATTATAAGCAAGCATACCCTGTTGAACATGAAAAAAGGAATTATAGAAAAAATTACAATTTCTCCCAAAAAGAAAATTCTAAGAGGAATTATGGAAAATCAAATAATTTAAAGACAAATTATGTACATTATAATACAATAGAATCAAGGAATAATAAAGAAGAAAATTATCAAGAGATATCTAACATAAAACCAGAAATTAAACCCAAAAAATATAGCAGTAATGCCATTGATAATAGGACATTGGATGTTCAAAAACTGAATAGAAAACTTGACCATGTCTCACAGAGAGAAAGATTAGAAGAATTAATTGTCCATTGCCTGTTGGAATGTTTAGTTTGTTATGAAAAGTTGAAGCATCACAATAAGGTGTGGTCTTGCAAGCAATGCTACCATGTACTGCATTTGCAGTGTGTGACAAAATGGGCAGAATCGTCTAAGATGGAATCGGGTTGGCGTTGTCCAGCTTGTCAAAATATTTACATGGAAATCCCCGAAAACTATGTGTGTTATTGTGGTAAAATGACCGATCCTCCTTATTTACAAGGACGCATACCACATAGTTGTGACGAGGTTTGTGGTCGTCAGAATCGTTCCTGTTCGCACAATTGTACCCTTCTGTGTCACCCGGGCCCTTGTCCCGAATGTAACGTAATGGTGACACGTTCTTGCAGTTGCGGTTCAACATCGGCAATGTTGAAATGCAGTTCCAAAATTGCCATACAGTGTACTTCAATTTGCAATAAACTTTTAAACTGTGGCTCGCACAAATGTACAAAAGTATGTCATGCAGGCGATTGCGAACCTTGTAAGGAAATTATCAAACAGGAATGCTATTGTTACAAACAGGGTCGAATTGTTCCTTGTACTTCTAAAACAACTGGTAAAGCGTTCTACAGTTGCGGCGAAAATTGCGAAAAACTTTTGGAATGTACGAACCATAAATGCCAACAAGTTTGTCATGAAGGGAAGTGCAATCCATGCACTAGATCCCCTAGTTTGATTTCTACGTGCCCTTGTGGGAGCAAAAAACTACAAGATGTCAGAAAGTCATGTTTAGATCCTATACCTTCATGTGGTCAGATTTGTGGCAAACCTTTAAAGTGTGGACAACCAGGGGCGCCTCACTTATGCAAGGGACGTTGCCACGAAGGAGACTGTCCCCCTTGTTCTCTCACAACTACTGTTAAGTGTCGCTGTGGCTCAATGGACAAAGAAATGCCTTGCCAGAAACTAACAACCAGAGCTGATGACGCTAGATGTCAACGGAAATGCACCAAAAAACGTTCGTGCGGCAAACACAAATGTAACCAGAATTGTTGCATCGATATCGAACACATCTGCCCTCTCCCATGCAGCCGCATGCTTTCCTGCGGGAATCACCGTTGCGAACTCACCTGTCACAGAGGGCGTTGCTCCTCTTGTTTGCAATCGAGTTTCGACGAACTTTACTGCGAATGCGGCGCATCCGTTATTATGCCTCCGGTACCGTGCGGTACGCGACCTCCCGCCTGTTCGATGCCGTGTTCGCGTACACGTCCTTGCGGCCACGAACCGTTGCACACATGCCACACCGGGTCTTGTCCTCCATGCACAGTTTTAATCAAGACTTGGTGTTACGGACTGCACGAGCAGAGGACCACCATTCCTTGTCATCAACAAAGCTTTAGTTGCGGACTGCCATGCGGAAAACCAATGCCTTGCGGTAGACACAACTGCGTTAAGCCTTGTCATCTTGGCCCGTGTCCACAACCGTGCAAGCAGCCCTGTGTCGAAGCCCGTCCAGGTTGCAGTCATCAGTGTAATCAGCCTTGTCATGAGCCCCCATGCCCCGAAACACCGTGTAAACAAATGGTCAAAGTCACTTGCCAATGTGGTTTAAGATCCGCTTCCAAAATTTGCTTGGATTTGGTCAGTGAATACCAGACGATTGCCATGTCCCACTTGGCTAGTAAAATGGAAGAGATACAAAGAGGAGAGATCGTTGACCTGACTGACGTAGTTGTTGGCAAACAGTCTAAAAAGAATGCCGTTGTAAAAGCACTGGAATGTAATGACGAATGTCGAGTTGTAGAACGTAATCGTCGCATGGCGATAGCACTTCAAGTGTCTGGCTCAGATTTCCAGCAGAAAATCATACCGAAATATTCAGAGTATATGCGCCAATGGGCAAAAAAGAATCCAACTTTTTGTCAATATGTGCACAACAAACTTTCTGAACTCGTACAACTGGCCAAGCAAAGTAAGCAGAAATCGCGTTCATTTTCGTTTGAAACGATGAACAAAGATAAGAGACACTTTGTGCATGAATATTGCGAACATTTCGGTTGCGAAAGTGCCGCATACGACCCTGAACCTAACAGAAACGTAGTGGCAACAGCCTCAAGAGACAAATCATTCATTCCAAGTTATAGTTTGCTAGAAATAATTCAAAGGGAGAACGGACAAAGGAAAGTTCCTGGTCCACAGCAACTGGAAAAAGGCCAACGATCCGCGTCAGAGAGTGTGTCATTGAAGATTCCAGGGAGACTTAATAGGCCTTCCACCCCTCCTGGAGAGTATGTAGACTATTTTGATTATCCTCCAGTTTAA
- Protein Sequence
- MSESGAYNSSINTHTAGNSTRYNDNGSDHYKTDTACNVYNRNIPISSSTLTPDAKEFKPSSSLDYNNEITEPSISNGAIRKNYKKNIDNGTRYYSRYSNSNDRYRNVNNYNKSYYKQAYPVEHEKRNYRKNYNFSQKENSKRNYGKSNNLKTNYVHYNTIESRNNKEENYQEISNIKPEIKPKKYSSNAIDNRTLDVQKLNRKLDHVSQRERLEELIVHCLLECLVCYEKLKHHNKVWSCKQCYHVLHLQCVTKWAESSKMESGWRCPACQNIYMEIPENYVCYCGKMTDPPYLQGRIPHSCDEVCGRQNRSCSHNCTLLCHPGPCPECNVMVTRSCSCGSTSAMLKCSSKIAIQCTSICNKLLNCGSHKCTKVCHAGDCEPCKEIIKQECYCYKQGRIVPCTSKTTGKAFYSCGENCEKLLECTNHKCQQVCHEGKCNPCTRSPSLISTCPCGSKKLQDVRKSCLDPIPSCGQICGKPLKCGQPGAPHLCKGRCHEGDCPPCSLTTTVKCRCGSMDKEMPCQKLTTRADDARCQRKCTKKRSCGKHKCNQNCCIDIEHICPLPCSRMLSCGNHRCELTCHRGRCSSCLQSSFDELYCECGASVIMPPVPCGTRPPACSMPCSRTRPCGHEPLHTCHTGSCPPCTVLIKTWCYGLHEQRTTIPCHQQSFSCGLPCGKPMPCGRHNCVKPCHLGPCPQPCKQPCVEARPGCSHQCNQPCHEPPCPETPCKQMVKVTCQCGLRSASKICLDLVSEYQTIAMSHLASKMEEIQRGEIVDLTDVVVGKQSKKNAVVKALECNDECRVVERNRRMAIALQVSGSDFQQKIIPKYSEYMRQWAKKNPTFCQYVHNKLSELVQLAKQSKQKSRSFSFETMNKDKRHFVHEYCEHFGCESAAYDPEPNRNVVATASRDKSFIPSYSLLEIIQRENGQRKVPGPQQLEKGQRSASESVSLKIPGRLNRPSTPPGEYVDYFDYPPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00030686;
- 90% Identity
- -
- 80% Identity
- -