Basic Information

Insect: Agrilus biguttatus
Gene Symbol: stc
Assembly: GCA_963921985.1
Location: OY998117.1:36335679-36339558[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.6 1.8e+04 -3.8 1.6 15 19 178 182 177 182 0.81

2 13 0.029 3.1e+02 1.8 0.7 4 10 211 217 210 217 0.97

3 13 1.5e-06 0.016 15.5 13.1 1 18 224 240 224 241 0.93

4 13 1.7e-09 1.9e-05 24.9 14.0 1 19 277 295 277 295 0.98

5 13 1.3e-07 0.0014 18.8 17.2 1 18 335 352 335 353 0.99

6 13 1.2e-06 0.013 15.8 9.2 1 19 393 415 393 415 0.86

7 13 0.66 7.1e+03 -2.6 1.8 5 10 444 449 444 449 0.93

8 13 0.082 8.9e+02 0.3 12.9 1 11 455 465 455 477 0.88

9 13 1.2e-10 1.3e-06 28.5 13.8 1 18 482 499 482 500 0.97

10 13 0.0013 14 6.0 14.4 1 19 539 556 539 556 0.89

11 13 2 2.2e+04 -5.0 2.4 9 13 574 578 574 586 0.54

12 13 2e-07 0.0021 18.3 15.8 1 19 592 611 592 611 0.97

13 13 0.00032 3.5 8.0 16.0 1 18 621 639 621 640 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.6	1.8e+04	-3.8	1.6	15	19	178	182	177	182	0.81
2	13	0.029	3.1e+02	1.8	0.7	4	10	211	217	210	217	0.97
3	13	1.5e-06	0.016	15.5	13.1	1	18	224	240	224	241	0.93
4	13	1.7e-09	1.9e-05	24.9	14.0	1	19	277	295	277	295	0.98
5	13	1.3e-07	0.0014	18.8	17.2	1	18	335	352	335	353	0.99
6	13	1.2e-06	0.013	15.8	9.2	1	19	393	415	393	415	0.86
7	13	0.66	7.1e+03	-2.6	1.8	5	10	444	449	444	449	0.93
8	13	0.082	8.9e+02	0.3	12.9	1	11	455	465	455	477	0.88
9	13	1.2e-10	1.3e-06	28.5	13.8	1	18	482	499	482	500	0.97
10	13	0.0013	14	6.0	14.4	1	19	539	556	539	556	0.89
11	13	2	2.2e+04	-5.0	2.4	9	13	574	578	574	586	0.54
12	13	2e-07	0.0021	18.3	15.8	1	19	592	611	592	611	0.97
13	13	0.00032	3.5	8.0	16.0	1	18	621	639	621	640	0.93

Sequence Information

Coding Sequence: ATGAGTGGTTCTGGTGGTTGCAGTTCATCGAGTAATACCGTTGAGCCTACTGAGAATAGTACCAGATATGATAATTATCCTGACAATTACAATGCAGCTTACTGTATTAATAATTCAAACATTCCAGTTTCATCTAGCACCCTAACACCTGAAGCTAAGGAGTTCAAACCTAATAGTAACCTTAGTTATAATAGTGAAACGACTGAACCAACTAAAGCAAGAAACACTAAAAACGAAAATTATCAAGAAGTATCAAGTATAAAGCCGGAGACTAAGCCCAAAAAGTATAATACCAATGCTAGTAATAATAGGACAttcgattttcaaaaactgAATAAGAAACttgatAATGTTTCACAGAGAGAACGATTAGAAGAATTAATTGTACGTTGTCTATTGGAATGTTTAGTTTGTTATGAAAAACTAAAGCATCATGACAAGGTGTGGTCTTGTAAGCAATGTTACCATGTTCTGCATTTTAATTGCGTGACAAAATGGGCGGAATCATCTAAGATGGACTCAGGTTGGCGTTGTCCAGCTTGTCAAAATAGTTACTTACAAATTCCCAAGAAATATGTTTGCTACTGTGGTAAAATGACAGATCCTCCCTATTCACCAGGACATTTACCACATAGTTGTGATGAGGTATGTGGCCGTAAGAATCGATTTTGTTCGCACAACTGCACCCTTTTATGTCATCCAGGCCCTTGTCCCGATTGTAACATAATGGTGACACGTTCTTGTAGTTGTGGATCAATTTCAGTAATGACAAAATGCAGTTCCAAAGTTCCTATACAGTGTACTTCAATTTGTAATAAACTTCTAAATTGTGGCTCACACAAATGTACAAAAGTTTGTCATGAGGGAGATTGTGGGACTTGTAAAGAGATGGTTAAACAAGAATGTTATTGTTATAAACAAGGCCGAAGTGTGTCTTGTACCGCCGAAACGACTGGTAAAACATTGTACAGTTGTGGTGAGAATTGTGAAAAGTTGTTAGAATGCAGTAATCATAAATGCCAACAAGTGTGTCATGAAGGAATTTGTAACCCATGCTGTAGGTCACCTGGTTTGATTTTTAACTGCCCCTGTGGAAAAAAGAAATTAGGAGACGACAGAAAATCATGTTTAGATCCTATACCTTCTTGTGGTCAGacTTGCGGTAAAACTTTAAAGTGTGGGCAACCAGGAGCGCGTCATTTTTGCAAAGAACTTTGCCATGAAGGCGACTGCTCCATCTGTTCTCTAACAACTTCTGTGAAGTGTCGATGTGGCTCGATGGACAAAGAAATGCCTTGTTCGATGTTGACTACGAGAGCTGATGACGCCAGATGTCAGAGAAAATGTACCAAAAAACGTTCATGTGGCAAGCATAAATGCAATCAGAACTGTTGTATTGATATCGAGCACATTTGCCCTCTTCCATGTAGCCGTACGCTTTCGTGTGGTAATCATCGTTGTGATCGCACCTGTCACAAAGGTCGTTGTCCCCCTTGTTTGCAATCTAGCTTCGATGAACTTTATTGCGAATGCGGTGTATCCGTTATAATGCCTCCAGTACCATGCGGCACGCGTCCTCCCGCCTGTTCAATGCCCTGTTCGCGCACACGTTCTTGTGGTCATGAACCATTACACACATGCCACTCTGGGTCTTGTCCTCCATGCACAATCCTAATCAAAACCTGGTGTTATGGACAGCATGAACAAAGGGCCACTATACCTTGTCATCAGCAAACCTTCAGTTGCGGTCTGCCCTGTGGGAAACCGATGCCTTGCGGCAGGCACAGCTGCGTCaagCCATGCCATCTTGGACCATGTCCACAACCTTGCAAGCAACCTTGCGTCAAAATACGCCCCGGTTGCGGTCATCAGTGTAATCAGCCTTGTCATGATCCTCCATGTCCTGAAACATCTTGCAAACAAATGGTTAAGGTCAGTTGTCAGTGTGGTCTGAGGTCCGCCTCTAAAATTTGCCTGGATTTGGTCGGTGAGTACCAGACGATCGCCATGTCCCACTTGGCCAGTAAAATGGAAGAGATACAGAGAGGGGAGACCGTTGATTTGAGTGATCTAGTTGTTGGCAAACAGACTAAAAAGAATGCAGTACTAAAAGCATTAGAATGTAATGACGAATGCCGAGTGGTGGAACGTAATCGTCGCATGGCGATAGCACTACAAGTTTCTGGGTCAGACTTTCAGCAgaaaattatacctaaatattcaGATTATATGCGTCAGTGGGCGAAGAAGAATCCAACTTTTTGTCAGTACGTACACAGCAAACTCTATGAACTCGTTCAACTAGCCAAACAAAGTAGACAGAAATCGCGTTCTTTTTCGTTCGAAACAATGAATAAAGAAAAGCGACACTTTGTGCATGAATATTGCGAACATTTCGGTTGCGAAAGTGCCGCATACGACCCTGAACCTAATAGGAATGTAGTGGCGACGGCCTCGAGAGAGAAGTCGTATACTCCAAGTTATAGTTTGCTAGAAATTATTCAAAGAGAAAATGGACAAAGGAAAGTCCCTGGCCCACAGCAGTTAGAAAAGGGCCAAAGATCCACGTCGGAGAGCGTGTCACTAAAAGTCTCAGGGCGGCTCAATAGACCTCCTACCCCTCCTGGAGAGTATGTGGATTATTTTGATCATCCTCCAGCTTAA
Protein Sequence: MSGSGGCSSSSNTVEPTENSTRYDNYPDNYNAAYCINNSNIPVSSSTLTPEAKEFKPNSNLSYNSETTEPTKARNTKNENYQEVSSIKPETKPKKYNTNASNNRTFDFQKLNKKLDNVSQRERLEELIVRCLLECLVCYEKLKHHDKVWSCKQCYHVLHFNCVTKWAESSKMDSGWRCPACQNSYLQIPKKYVCYCGKMTDPPYSPGHLPHSCDEVCGRKNRFCSHNCTLLCHPGPCPDCNIMVTRSCSCGSISVMTKCSSKVPIQCTSICNKLLNCGSHKCTKVCHEGDCGTCKEMVKQECYCYKQGRSVSCTAETTGKTLYSCGENCEKLLECSNHKCQQVCHEGICNPCCRSPGLIFNCPCGKKKLGDDRKSCLDPIPSCGQTCGKTLKCGQPGARHFCKELCHEGDCSICSLTTSVKCRCGSMDKEMPCSMLTTRADDARCQRKCTKKRSCGKHKCNQNCCIDIEHICPLPCSRTLSCGNHRCDRTCHKGRCPPCLQSSFDELYCECGVSVIMPPVPCGTRPPACSMPCSRTRSCGHEPLHTCHSGSCPPCTILIKTWCYGQHEQRATIPCHQQTFSCGLPCGKPMPCGRHSCVKPCHLGPCPQPCKQPCVKIRPGCGHQCNQPCHDPPCPETSCKQMVKVSCQCGLRSASKICLDLVGEYQTIAMSHLASKMEEIQRGETVDLSDLVVGKQTKKNAVLKALECNDECRVVERNRRMAIALQVSGSDFQQKIIPKYSDYMRQWAKKNPTFCQYVHSKLYELVQLAKQSRQKSRSFSFETMNKEKRHFVHEYCEHFGCESAAYDPEPNRNVVATASREKSYTPSYSLLEIIQRENGQRKVPGPQQLEKGQRSTSESVSLKVSGRLNRPPTPPGEYVDYFDHPPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00031481;
90% Identity: -
80% Identity: -