Acya008270.1
Basic Information
- Insect
- Agrilus cyanescens
- Gene Symbol
- tfip11
- Assembly
- GCA_947389935.1
- Location
- OX376708.1:5021919-5026109[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-99 1.4e-94 318.3 14.8 1 275 400 672 400 672 0.98 2 2 0.28 7.1e+03 -2.2 0.1 245 270 687 712 681 718 0.55
Sequence Information
- Coding Sequence
- ATGTCAGACGAAGAGTACGAAAAATTTGAAATTACAGATTACGATATTGAAAATGAATTTAATCCGAATAGAAGACGACATAGATTAAGTAAACAACAACAAATTTACGGTATTTGGGCTGATGATAGCGATCAAGAAGAAAATGGAAGAGCATCGTTTAAATCAGCTAAAACACCAAAAAACTACAGTGCCCCCATCGGTTTTGTTGCCGGAGGAATCCAACAAGCAGGCAAGAAGAAAGAAATAGAACATGGTATCAAAAAAGAAGAAAGTGATGAAAGCAATGATGAAGACTCAGGAGCCCCACTTATAAGAAATAGTTCCAGTGAATCAGAAAATGAGATTTCATACAAAGGGTTTGGAATGAAAAGCAACAACCAGTCAGTTGTAACTGAAATAACAGGAGATATAGCTGGATTAAGGAAAAAGAACTTTCATAAAAATTCAGAATTAATGAGGACTGGAGTTGGAAATTGGGAAAAGCATACAAAAGGAATAGGAGCAAAACTGCTGCTCCAAATGGGATATCAACCTGGAAAAGGCTTAGGTAAAGACCTTCAAGGTATTTCAGCACCTGTTGAAGCACATTTAAGAAAAGGTAGAGGTGCTATTGGTGCATATGGACCAGAAAAGGCTGCAAGCATAGCAACAACAAAAGTTGAAAAGGATCATCGAATTGAAAGGAAAACTGATGAAAAACAAGGCGAATCAAAGTGGAGAAAAGATGACATGACAAAAAAGAAATCCAGATATTATTACAGAACAGTTGATGATGTTATCGAAAAAGGTAAAAGGCCAGGAATGTTTACCAATTCTAGTACTTTAAGTGAACTCAGCAAAGTAAAGGTGATTGACATGACTGGCCCACAGCAAAGAGTGCTTAGTGGCTACCATGCTCTTAGTGGTCTAAAAGCTCCCCCTGGAGTTGAACATTATGAAGATGTCGTTCACAAGAAATGCTCCAACTTTAGCCTACCTGAAATTCAACACAATCTGGATGTATTGGTGGATATGTGTGAACAGGATATTATTAAAATTGACAGAATTACAAGGTACAACCAAGATGAGATAGTTGCATTACAGCAGGAAGAAGAGTCTCTAAAAACTACTGTGGAGCATGAAGAAAGGCAACTAAAAAATTTAAAACGTGTCCTAGATCAGGTTGATAAGCTTACTGACCCATCTTTAGGTCTTTCATTAGGGCAATTTGCTCAAGCTTTTCGAGACTTACAGGCAAATCATTTCGAGGAGTACTGTAGCTTTAATTTGGGTGAATTAGCGCCAGGTTTGGTCGGTCCTTTGATCACGTCGGCATTAGCTAGTTGGCAACCGTTGAACTCTCCAAAGATGTTCATGGACATTTTCACTCAGTGGAAAGACATTTTGGAGATGCCGAAGCGCCAGCGTGGGACACTTGAAGGTAATAGTAAGGGTCTTCAGCCATATGATAATCTCTTATGGCACACTTGGCTGCCAGTTATGAGAACATGCGTTAGTGAATGGAATCCCAGAGATTGTGATCCTATGATTAGTCTTCTAGAGGATTGGGCTTCTCTTCTTCCCCACTGGTTGATGCAGAATATTCTTGAGCAGTTAATACTACCCAGATTAAATACAGAAGTAAATAGTTGGAACCCTTTAACCGATACTGTTCCTATACATTTCTGGATACATCCCTGGATTCCACTGTTAGATACTCGTTTGCACAACACAATATATCCAGTGATTCAAGAAAAGTTAGGAACTGCCTTGACCAGCTGGCACCCTTCAGACAGGTCGGCTAAACTGATGCTTAAACCTTGGAAGGAAGCGTTACCTGAAGGTTTATTTCTTGCATTTCTTGTCAAACATATCGTTCCTAAACTGCAACTTTGTATGCAGTCATTTATTATCAATCCGCACCAACAACATTTAGATTCCTGGAACTGGGTAATGGATTGGGCAGATATGCTTTCTCTTGCCAACATGACTTTAATATTGGACAAGTATTTTTTTCCAAAGTGGCTACAAACTTTATCACTTTGGTTGAATCACGGTCCCGATTTTAATCAAGTCACAGAATGGTATTCGGGTTGGAAACGGATGTTATCGGAAGAACTTCTAGCACAACCAACCATCAAAGACAACTTCCACAAAGCTCTGGAGATGATGAACAGGGCAGTATGTGCTGGACAACAGCCAGGTGCCAAGGAATCTGTGTCTTATCTGAGGAATATTGAAGGAACGCTACCTCCACCTCCTCCTCCACCACCTAGAATTGAAAACTTTGCAGAGGCTGTTAGAACGGCGTCACAAATTCCTCAGGGATTCAAAGACCTTATGGCTAAACGTTGTGAAGAAAGAGGTATTCTATTTGTGCCAATTCCAAACAAGTTTCATGAAGCTAAACAGGTGTACAGGGTTGGTGCAAATGGTGTTCAGTGCTACATAGACAGAAGTGTTGTTTTTTACTCACGACATAACTCGTCCTGGTTACCAGTCTCTCTCAACAGACTCTTAGATATGGCCTAA
- Protein Sequence
- MSDEEYEKFEITDYDIENEFNPNRRRHRLSKQQQIYGIWADDSDQEENGRASFKSAKTPKNYSAPIGFVAGGIQQAGKKKEIEHGIKKEESDESNDEDSGAPLIRNSSSESENEISYKGFGMKSNNQSVVTEITGDIAGLRKKNFHKNSELMRTGVGNWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKAASIATTKVEKDHRIERKTDEKQGESKWRKDDMTKKKSRYYYRTVDDVIEKGKRPGMFTNSSTLSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHYEDVVHKKCSNFSLPEIQHNLDVLVDMCEQDIIKIDRITRYNQDEIVALQQEEESLKTTVEHEERQLKNLKRVLDQVDKLTDPSLGLSLGQFAQAFRDLQANHFEEYCSFNLGELAPGLVGPLITSALASWQPLNSPKMFMDIFTQWKDILEMPKRQRGTLEGNSKGLQPYDNLLWHTWLPVMRTCVSEWNPRDCDPMISLLEDWASLLPHWLMQNILEQLILPRLNTEVNSWNPLTDTVPIHFWIHPWIPLLDTRLHNTIYPVIQEKLGTALTSWHPSDRSAKLMLKPWKEALPEGLFLAFLVKHIVPKLQLCMQSFIINPHQQHLDSWNWVMDWADMLSLANMTLILDKYFFPKWLQTLSLWLNHGPDFNQVTEWYSGWKRMLSEELLAQPTIKDNFHKALEMMNRAVCAGQQPGAKESVSYLRNIEGTLPPPPPPPPRIENFAEAVRTASQIPQGFKDLMAKRCEERGILFVPIPNKFHEAKQVYRVGANGVQCYIDRSVVFYSRHNSSWLPVSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00031946; iTF_00030207;
- 90% Identity
- iTF_00030207;
- 80% Identity
- -