Basic Information

Insect: Agrilus biguttatus
Gene Symbol: -
Assembly: GCA_963921985.1
Location: OY998122.1:11585624-11590488[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.1e-05 0.0029 18.2 1.7 1 23 457 479 457 479 0.97

2 18 3.2e-05 0.0023 18.6 1.8 1 20 485 504 485 507 0.94

3 18 1.8e-05 0.0013 19.3 0.8 1 23 513 535 513 535 0.98

4 18 0.00033 0.023 15.4 4.3 1 21 541 561 541 563 0.95

5 18 3.2e-05 0.0022 18.6 4.6 1 23 569 591 569 591 0.99

6 18 3.1e-05 0.0021 18.6 5.3 1 23 597 619 597 619 0.97

7 18 5.2e-06 0.00036 21.1 7.2 1 23 625 647 625 647 0.97

8 18 1.2e-07 8.3e-06 26.2 2.7 1 23 653 675 653 675 0.98

9 18 8.8e-05 0.0062 17.2 6.7 1 23 681 703 681 703 0.97

10 18 6.3e-06 0.00044 20.8 5.9 1 23 709 731 709 731 0.98

11 18 2e-06 0.00014 22.4 3.0 1 23 737 759 737 759 0.98

12 18 8e-06 0.00056 20.5 7.9 1 23 765 787 765 787 0.98

13 18 0.00042 0.029 15.1 9.5 1 23 793 815 793 815 0.97

14 18 2.1e-05 0.0014 19.2 7.7 1 23 821 843 821 843 0.98

15 18 1e-05 0.00072 20.1 7.3 1 23 849 871 849 871 0.97

16 18 0.00011 0.008 16.8 0.4 1 23 877 899 877 899 0.98

17 18 0.031 2.2 9.2 5.1 1 23 909 931 909 931 0.98

18 18 8e-07 5.6e-05 23.6 0.8 1 23 937 959 937 959 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.1e-05	0.0029	18.2	1.7	1	23	457	479	457	479	0.97
2	18	3.2e-05	0.0023	18.6	1.8	1	20	485	504	485	507	0.94
3	18	1.8e-05	0.0013	19.3	0.8	1	23	513	535	513	535	0.98
4	18	0.00033	0.023	15.4	4.3	1	21	541	561	541	563	0.95
5	18	3.2e-05	0.0022	18.6	4.6	1	23	569	591	569	591	0.99
6	18	3.1e-05	0.0021	18.6	5.3	1	23	597	619	597	619	0.97
7	18	5.2e-06	0.00036	21.1	7.2	1	23	625	647	625	647	0.97
8	18	1.2e-07	8.3e-06	26.2	2.7	1	23	653	675	653	675	0.98
9	18	8.8e-05	0.0062	17.2	6.7	1	23	681	703	681	703	0.97
10	18	6.3e-06	0.00044	20.8	5.9	1	23	709	731	709	731	0.98
11	18	2e-06	0.00014	22.4	3.0	1	23	737	759	737	759	0.98
12	18	8e-06	0.00056	20.5	7.9	1	23	765	787	765	787	0.98
13	18	0.00042	0.029	15.1	9.5	1	23	793	815	793	815	0.97
14	18	2.1e-05	0.0014	19.2	7.7	1	23	821	843	821	843	0.98
15	18	1e-05	0.00072	20.1	7.3	1	23	849	871	849	871	0.97
16	18	0.00011	0.008	16.8	0.4	1	23	877	899	877	899	0.98
17	18	0.031	2.2	9.2	5.1	1	23	909	931	909	931	0.98
18	18	8e-07	5.6e-05	23.6	0.8	1	23	937	959	937	959	0.96

Sequence Information

Coding Sequence: ATGAATTCTACAGAGCAAGGCCCCCTGTCGGGGGCCCAGACCTCGTCGGAAAATTCAGAAGTACAGGGCACATCTCAGCGGCCTCCACCTGCAACTTCTGTACCAACAGACCTAAGAGTTAACACAACAGCCTTAAATGCAGTTGCTTTAAGTAGTGTTGCCAAATATTGGGTACTTACCAATTTGTTACCAGGTCCAATACCACAAGTTTCAGTTTATGGCCTTCCTGGCTCTAATAGAGCTGACAATCAGGGAAAAATATCACAAgtTTTGTTACAGGAGGCAATGCTTAGCCAGCACGCGGCTGCTGGCTTATTGCCTGCCGATCCTCTTCTTCTTCAACAACATTCTCAAATTCCCGTTAGCATTTCAACGTCCCAGGGCGTCACCAATCTTGCAATACCCGCAAGTGCCATGCACTTAGATCATCACACCCATAATAGTCACAATCAATCCCTCGCTAATCAACAAAACGAAGTGCAAACCATCGTTTCAcagtcaaatcaattaaatacgCAACAAATTCAAAGCAGCCAACAAAATCACGCACAAAACTCTCAACAACAACAccaacaacagcagcagcagcagcaacaacaacaacaacaccaACAGCAACAACAGAATATGGTACAGGTACAGGTACAAGACAACCTGGTTTCGGTGATCGAAGATAGTAAAGAACATAAGGATATGATTGCTGCACAAATAAACCAAAATCAGATGCATTTAAATGGAAGTCAACAGCAAATAAATCATCAGGCATTAACAGTGCAACAATTGCAACATATGCAGGTACAACAGGTTCTCGACAACGTCGTGAGGATGGAGAATAACGTTCAAAACGAACAGAATCATTCAGGAAATGATCAGCAAAATTCAGTCAATGAAAATCATATTCAAATAATTAAAGACGAGAAGAATGTATCCAATTGCCCGAAACTACTGACCAGTGCTTCTCACTTCGGAATGCATGATGTCAAATCTAATTTAATGGATATGAGAACGGCCGATGGGAATCCAATTAAAATAGCAGGAGGTATTCCTGAACAAGATTTAGCCAAATCACTCGGTATCGAAgttgtacaaaatatttacaaagttaaCGTGGACGATCTTAACCAGTTGTTAGCATATCACGAAGTTTTTGGAAAGTTGCAGGGCGAAATAGCAACACAATCTAATATAGTTCAAAATACTTCGGGAAATTCGAATTTATCTctacaacaacagcaacaacccCAGCAACAGAACAACATTTCGAACAATATTCAGATTGTTACTCCAAAAACTCTTACGGAAAACGATCATGAACCATCCACTAGTTCGATTACTGCAGATAGTCCTCCTATTATAATGACAGGGAGTCACGTTTGTGATATTTgtggaaaaatatttcaatttagaTACCAATTGATTGTACATCGGCGTTATCATAGTGAAAGGAAACCGTTCACATGTCAAGTTTGTGGAAAAGCATTCACAAATGCCCAGGAGCTGACCAGACATGGCAAATGTCATTTGGGTGGTAGCATGTTCACGTGTGCGGTCTGTTTTCACGTTTTTGCGAACGCAGCTTCTTTAGAAAGGCATATGAAACGCCATTCTACTGATAAGCCGTACAATTGTACCATTTGTGCGAAATCTTTTGCGAGAAAAGAGCACTTGGAAAATCATACGCGCTGCCATACTGGTGAGACTCCATACAGGTGTCAATATTGCGCTAAAACGTTCACTAGAAAGGAACACATGGTAAATCATGTCCGTAAACATACGGGGGAGACTCCTCATAGATGTGAAATTTGCAAAAAGTCGTTCACAAGAAAGGAGCACTTTATGAATCACGTCATGTGGCATACCGGTGAAACACCACATCATTGCACTATTTGCGGTAAAAAGTATACAAGGAAGGAACACTTGGCTAATCACATGCGGTCACACACCAACGACACGCCATTCCGATGCGAAATATGTGGCAAGTCGTTCACGAGGAAAGAACATTTCACGAATCACATAATGTGGCACACGGGCGAGACACCACATCGATGTGATTTTTGTTCGAAAACGTTCACTCGCAAAGAGCACTTACTCAACCACGTACGACAACATACCGGGGAATCCCCTCATAGGTGCGAGTACTGTTCGAAATCGTTTACTCGAAAGGAGCATCTTATAAATCACGTGCGACAACATACAGGTGAAACTCCGTTTAGGTGCAACTTTTGCCCTAAAGCGTTCACACGTAAAGACCATCTGGTAAACCACGTGCGACAGCATACTGGCGAATCACCCCATAAGTGCACGTACTGCACGAAATCTTTCACTCGTAAAGAACACTTGACAAACCACGTGCGTCAACACACCGGCGAATCGCCTCATCGATGTCATTTTTGTTCGAAACAGTTCACGCGTAAGGAACATTTGACCAATCATGTGCGTTTACACACGGGCGAGTCACCACATCGGTGCGAATTCTGTCAAAAAACGTTCACGCGCAAAGAGCATCTCACAAATCATTTACGACAACACACCGGCGAAACACCTCACTGTTGTACTATTTGTTCGAAACCATTTACGCGAAAAGAGCATCTTATAAATCACATGCGTTCGCATACTGGAGAGAGGCCGTTTTCGTGTGGTGAATGCGGCAAATCGTTTCCCTTAAAGGGAAATCTGCTGTTCCATCAGCGATCTCATAACAAAGGGGCGGAGGCCGAAAGACCGTTCCGCTGCGATTTATGTGATAAAGACTTTATGTGCAAGGGACACTTGGTATCTCATCGAAGATCTCATAGCGGCGAGAGGCCGCACGCGTGTCCGGATTGCGGTAAAACCTTCGTTGAAAAGGGTAATATGTTACGGCATCTCAGGCGACACACAAATGAGAATGGTCAAATGCGACCGCCCGTTGCGGGTACGCAAGTATCGTCGTCTTCGAACGTAACTCCGGTGCAAACATCGGTGTCTGCAACGTTGCAGATTCCTCAGGTGAGTCAAGCGCAGAGTTTGTCAAACGCTGTACCCACCGGTGCGCCCCCTAGTATCGTTCAACAGCAGGCGCAACATCTGTCGATGCATCAGCAGGCTGGCCATCCAGTCGTAGTGCCCACTGGAAACGCAAACGTTCTAACTTCTTACTGA
Protein Sequence: MNSTEQGPLSGAQTSSENSEVQGTSQRPPPATSVPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGSNRADNQGKISQVLLQEAMLSQHAAAGLLPADPLLLQQHSQIPVSISTSQGVTNLAIPASAMHLDHHTHNSHNQSLANQQNEVQTIVSQSNQLNTQQIQSSQQNHAQNSQQQHQQQQQQQQQQQQHQQQQQNMVQVQVQDNLVSVIEDSKEHKDMIAAQINQNQMHLNGSQQQINHQALTVQQLQHMQVQQVLDNVVRMENNVQNEQNHSGNDQQNSVNENHIQIIKDEKNVSNCPKLLTSASHFGMHDVKSNLMDMRTADGNPIKIAGGIPEQDLAKSLGIEVVQNIYKVNVDDLNQLLAYHEVFGKLQGEIATQSNIVQNTSGNSNLSLQQQQQPQQQNNISNNIQIVTPKTLTENDHEPSTSSITADSPPIIMTGSHVCDICGKIFQFRYQLIVHRRYHSERKPFTCQVCGKAFTNAQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCTICAKSFARKEHLENHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCEYCSKSFTRKEHLINHVRQHTGETPFRCNFCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKQFTRKEHLTNHVRLHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCTICSKPFTRKEHLINHMRSHTGERPFSCGECGKSFPLKGNLLFHQRSHNKGAEAERPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRRHTNENGQMRPPVAGTQVSSSSNVTPVQTSVSATLQIPQVSQAQSLSNAVPTGAPPSIVQQQAQHLSMHQQAGHPVVVPTGNANVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00032214;
90% Identity: iTF_00032214;
80% Identity: -