Abig006427.1
Basic Information
- Insect
- Agrilus biguttatus
- Gene Symbol
- Lztr1
- Assembly
- GCA_963921985.1
- Location
- OY998119.1:39586015-39588661[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-14 4.2e-12 46.5 0.3 4 106 360 483 357 487 0.85 2 4 0.39 1.1e+02 3.3 0.1 72 108 482 517 478 518 0.83 3 4 6e-19 1.7e-16 60.6 0.0 8 97 577 667 572 682 0.85 4 4 1.1 3e+02 1.9 0.1 77 101 681 705 676 713 0.79
Sequence Information
- Coding Sequence
- ATGAGTGGTTTTACTAATGCTGAAGCAACTTCGTCAGGATTCGACAATGGTTTAACTTTGGAATTTGGCCCATTGGAAACAGTTCATCGATGGAGACGAATGCCTGAATGTGATGAATTTGTTGGAGCAAGACGAAGCAAACACACTGTAGTAGCTTACAAAGAAGCAATATATGTGTTTGGAGGAGATAATGGCAAAAGTATGCTTAATGATCTCTTGAGGTTTGATGTGAAAGAAATGTCATGGGGAAGGGCTTTTGCTACTGGTAATCCCCCTGCACCGAGATACCACCATTCCGCTGTCGTTCACAACTCATCGATGTTTGTTTTTGGGGGTTACACTGGAGATATACATTCCAATTCAAATTTGACCAACAAAAATGATCTCTTTGAATATAAGTTCAACTCTGGTCAATGGGTTGAATGGAGATTTGTGGGGATAATCCCTGTGCCCAGGTCAGCACATGGAGCAGCTGTTTTTGATAATAAACTGTGGGTTTTTGCTGGTTATGATGGGAATGCCAGACTTAATGATATGTGGACAATTTCTCTCGATGGCGAAAGTCGTACATGGGAAGAAGTAGACCAGAAAGGAGAATGTCCTCCAACATGCTGCAATTTTCCTGTAGCAGTAGCTCGAGATAGTATGTTTGTTTTCAGTGGACAAAGTGGAGCAAAAATAACAAACTCCTTGTTCCAGTTTAATTTCAAATCTAAAACatGGTCACGTATATCTACTGAGCATATTTTACGAGGAGCTCCACCACCACCTGCTCGTCGTTATGGACACACTATGGTGGCTTACGACCGTCACTTGTACGTTTTCGGTGGGGCAGCAGACAGCACCGTGTCCAATGATTTGCACTGTTTTGATCTAGACACCCAGACATGGTCCATAATCTTGCCAACTGTGGACTCCAATGTACCCACCGGTCGTCTTTTCCACGCTGCTGCTGTAGTTGGTGATGCCATGTTCATTTTCGGGGGCACAGTTGATAACAACGTCCGCAGTGGGGAAATGTATCGTTTTCAGTTCTCCAATTATCCCAAATGTACTCTACATGATGATTTTGGTAAAATTCTCGAACTGCGACAGTTTTGTGATGTCCGGTTTATGGTGGGACATGAAGAAAAGCAAATTCTTGCACATTTAGCTTTGGTTGCAGCCAGATCTAAGTATTTAAGGAATAAAATAAGACAAGCGAAAGAGGCTAAACAACAAGATTCTCCAACGAGCGATCCTTTGGACGTCAAGCTTCCAGATGCGAGTCCTGAAGCTTTTGAAAtggtattaaattatatttatatggaCTGTATTGATCCAACAAAGAAGGCAAAACAAGGCGAAGATCTCTTTAGTAATCGAATTGTCCTTTTAATGATGGACGTTTATAGACTTGCAGTTAAATTTCATATGGTTCGACTTGAACATCTTTGCATTCAATATCTGGGAGCTACGATATGTTTGAAGAATGTCCTTGAAGCCCTTCACAACGCTGATGTTTTGGCTTTGGATTTCATCAAAGAATTCTGTTTGAGGTTTATCGTGAAAGATCCAAATTATAACGCGATTGTAATGAGCAAAGAGTTTGAAACATTGGACAGAGGATTGATGGTTGAAATAATACGACGAAGACAAATGCCACAACCTAAAGTCCAAATTGACACAAATTTTGACATGGCAGGCTCGTCTCTCGAGCAGGATATGGCGATGTTCTTGAGACTTACAGGATTAGAATTTTGTGATATCGATTTAGTACTTGATGGTAATGCTATACCTGCTCACAAGACAATATTAGCTGCCAGATGCAGCTATTTTGAAGCAATGTTTAGGTCTTTTATGCCCCCTGATAACAAAGTGAAGATTCAAATAGGAGAAATGACTCCTTCAAGAACCTCATTTGACTCTCTACTTCGTTATATCTACTATGGAGACATTAACATGCCACCTGAAGACTCATTGTACCTGTTTTCAGCACCTTACTTTTACGGTTTTACAAACAGCAGATTGCAAACGTTTTGCAAGCAAAATTTAGAAATGAATGTAACAGTTGATAATGTGATACAAATTTTGGAAGCAGCAGATCGTATGCAAGCAACTGACATGAAGAAATATGCTCTAGATTTAATCGTTCATCACTTTATTAAAGTCGCCAGGCTTCCCCGTTTAAAACAGTTAAGCAAGGATCTGATTTTGGATATTCTGATGGCTTTGGCTAATGACATGAGTGCTCCCAAAATCTGTCAAGACTTATCTACTATAAGTCTGAACAGTGACTCATAA
- Protein Sequence
- MSGFTNAEATSSGFDNGLTLEFGPLETVHRWRRMPECDEFVGARRSKHTVVAYKEAIYVFGGDNGKSMLNDLLRFDVKEMSWGRAFATGNPPAPRYHHSAVVHNSSMFVFGGYTGDIHSNSNLTNKNDLFEYKFNSGQWVEWRFVGIIPVPRSAHGAAVFDNKLWVFAGYDGNARLNDMWTISLDGESRTWEEVDQKGECPPTCCNFPVAVARDSMFVFSGQSGAKITNSLFQFNFKSKTWSRISTEHILRGAPPPPARRYGHTMVAYDRHLYVFGGAADSTVSNDLHCFDLDTQTWSIILPTVDSNVPTGRLFHAAAVVGDAMFIFGGTVDNNVRSGEMYRFQFSNYPKCTLHDDFGKILELRQFCDVRFMVGHEEKQILAHLALVAARSKYLRNKIRQAKEAKQQDSPTSDPLDVKLPDASPEAFEMVLNYIYMDCIDPTKKAKQGEDLFSNRIVLLMMDVYRLAVKFHMVRLEHLCIQYLGATICLKNVLEALHNADVLALDFIKEFCLRFIVKDPNYNAIVMSKEFETLDRGLMVEIIRRRQMPQPKVQIDTNFDMAGSSLEQDMAMFLRLTGLEFCDIDLVLDGNAIPAHKTILAARCSYFEAMFRSFMPPDNKVKIQIGEMTPSRTSFDSLLRYIYYGDINMPPEDSLYLFSAPYFYGFTNSRLQTFCKQNLEMNVTVDNVIQILEAADRMQATDMKKYALDLIVHHFIKVARLPRLKQLSKDLILDILMALANDMSAPKICQDLSTISLNSDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186316;
- 90% Identity
- iTF_00031199;
- 80% Identity
- -